Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00132 ATGGATTTCGATCAGGAGCACGACGACCCCGAAGAGGAAATGGAGGAAATTCCGGAGCAGACGGCGGCTTTCGACGCGATGACACCTGAGAGGCTGAGAATGGGAAACGACGGCGGAGAGGGAACGTCCTCAACGAGAAAAATTATCTCCGGTGTAAGATACAGGGAATGCCTGAAGAACCACGCTGTAAACATCGGTGCCCACGCCGTGGACGGGTGTGGCGAGTTCATTGCCGCCGGAGAAGAGGGTACTTTAGACGGCCTGAGATGCGCTGCATGTAACTGCCACCGGAATTTCCACCGGAAAGAAACAGATGCAGATCGCTCATTTCAACAGTACCACCATTATCAACAGCAGTATCACCACCCACAATTCTCTCCCTTCTACCGAGGGCCTCTACAACCATCTGGGTATCTTCACCTGGCCTCGCCTTCGATGCAGCAGCGACCGTTGGCGTTGCCTTCGACGTCCGGCGGAGGGCCGTTCAGTAGAAACGAAGAAGATGCATCGAATCCAAGCAGTAGTGGAGGAGATGGAAGTGGGTTGAAGAAGAGATTTAGATCCAAGTTTACTCAGGAACAAAAAGAAAAGATGTTGGCTTTCGCAGAGAGGCTTGGGTGGAGAATTCAGAAACATGACGAAGGTGCTGTGGATCAGTTTTGTGCAGAGAACTGTGTAAAACGACAGGTTTTCAAGGTTTGGATGCACAACAACAAGCACACACTTGGTAAGAAACCCTAA 741 51.15 MDFDQEHDDPEEEMEEIPEQTAAFDAMTPERLRMGNDGGEGTSSTRKIISGVRYRECLKNHAVNIGAHAVDGCGEFIAAGEEGTLDGLRCAACNCHRNFHRKETDADRSFQQYHHYQQQYHHPQFSPFYRGPLQPSGYLHLASPSMQQRPLALPSTSGGGPFSRNEEDASNPSSSGGDGSGLKKRFRSKFTQEQKEKMLAFAERLGWRIQKHDEGAVDQFCAENCVKRQVFKVWMHNNKHTLGKKP 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 905065 905805 - Bpe007982.1 Bpe02g00132 98281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00132 246 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 53 103 IPR006456 -
Bpe02g00132 246 MobiDBLite consensus disorder prediction 1 19 - -
Bpe02g00132 246 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 183 239 IPR006455 -
Bpe02g00132 246 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 38 245 - -
Bpe02g00132 246 MobiDBLite consensus disorder prediction 146 183 - -
Bpe02g00132 246 MobiDBLite consensus disorder prediction 146 178 - -
Bpe02g00132 246 Pfam ZF-HD protein dimerisation region 52 104 IPR006456 -
Bpe02g00132 246 SUPERFAMILY Homeodomain-like 170 244 IPR009057 -
Bpe02g00132 246 MobiDBLite consensus disorder prediction 1 26 - -
Bpe02g00132 246 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 54 103 IPR006456 -
Bpe02g00132 246 Gene3D - 168 244 - -
Bpe02g00132 246 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 38 245 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00132 Bpe-Chr2:905065 Bpe06g00095 Bpe-Chr6:1408916 3.03E-83 dispersed
Bpe02g00132 Bpe-Chr2:905065 Bpe15g00427 Bpe-Chr15:15790946 2.85E-57 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20840 PF04770 ZF-HD_dimer 1.60E-28 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00132 - - pvy:116138504 297.745