Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00138 ATGTTTTCCAAGCTCCATCACCGTCAACCACAATCCCTCCCCTTTTCCAATCCCTTCCAAATCCCTGCAAGAGAATGTCATCACCCGGAGGAAGAAGAAGAAGTAAGCCCCGCATGTCGTACACCATCCAGGAAGACCTCCGAGCCATCCTCCGGCGACTGCGCCACGATTGAAGTTGTCAAACGCCCCCGTGGCCGGCCTCCTGGCTCCAAGAACAAACCCAAAACGGGGGTTGTTGCGGCTCGCGTTCCGGAGCCTTCGATGAGCCCTTATATTCTCGAAGTTCCCGGAGGTAGTGATGTTGTCGAAGCCATTGGCCGCTTTTGCCGCCGAAAAAATATGGGGCTTTGTGTTCTCTCGGGCTCTGGCACGGTTTCTAACGTTACTCTACAGCAACCCTCTGCCACTCCGGGAGCGACGGTAACTTTTCATGGTCAGTTTCATATACTCTCCATCTGCGCCACGTTTCTCCCCCATTCGACGGCGTTTCCGGTGCCCAATGGCTTTGCTGTCTATCTGGCCGGTCCTCAGGGCCAGGTCGTCGGCGGTTTAGTCTCTGGAAATTTGATTGCCGCCGGAAGTGTGTTCGTTATAGCTTCTTCGTTCGACAATCCGTCTTATCACCGACTTTCGGATGAGGATGAGACTAGAAACTCAGACGCTAGCGGTGGCGGTGAGAAAAATTCTCCTATAGTCTCCGGTGCTAGAGACAGTGTGAGTCACGCTCCGGCGGAGTCGGGTGGCATGCCTACTTTTAGCTGCCGCGTTCCCTCCGATGTAATATGGGCTCCCACTGCAAGAGCACCTCCACCACCATACTAA 822 54.5 MFSKLHHRQPQSLPFSNPFQIPARECHHPEEEEEVSPACRTPSRKTSEPSSGDCATIEVVKRPRGRPPGSKNKPKTGVVAARVPEPSMSPYILEVPGGSDVVEAIGRFCRRKNMGLCVLSGSGTVSNVTLQQPSATPGATVTFHGQFHILSICATFLPHSTAFPVPNGFAVYLAGPQGQVVGGLVSGNLIAAGSVFVIASSFDNPSYHRLSDEDETRNSDASGGGEKNSPIVSGARDSVSHAPAESGGMPTFSCRVPSDVIWAPTARAPPPPY 273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 951701 952522 - Bpe007988.1 Bpe02g00138 98287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00138 273 Gene3D - 89 221 - -
Bpe02g00138 273 MobiDBLite consensus disorder prediction 24 39 - -
Bpe02g00138 273 CDD DUF296 90 200 IPR005175 -
Bpe02g00138 273 MobiDBLite consensus disorder prediction 207 255 - -
Bpe02g00138 273 Pfam Plants and Prokaryotes Conserved (PCC) domain 90 204 IPR005175 -
Bpe02g00138 273 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 24 272 - -
Bpe02g00138 273 ProSiteProfiles PPC domain profile profile. 85 223 IPR005175 -
Bpe02g00138 273 SUPERFAMILY AF0104/ALDC/Ptd012-like 87 215 - -
Bpe02g00138 273 MobiDBLite consensus disorder prediction 207 221 - -
Bpe02g00138 273 MobiDBLite consensus disorder prediction 1 18 - -
Bpe02g00138 273 MobiDBLite consensus disorder prediction 1 77 - -
Bpe02g00138 273 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 24 272 IPR014476 GO:0003680
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00138 Bpe-Chr2:951701 Bpe04g01716 Bpe-Chr4:23004462 1.78E-44 dispersed
Bpe14g00488 Bpe-Chr14:4358975 Bpe02g00138 Bpe-Chr2:951701 3.10E-112 wgd
Bpe02g00138 Bpe-Chr2:951701 Bpe02g01154 Bpe-Chr2:15141118 1.65E-116 wgd
Bpe02g00138 Bpe-Chr2:951701 Bpe04g00419 Bpe-Chr4:2705796 4.68E-110 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00138 - - zju:107421268 357.451