Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bpe02g00139	ATGGAGGTCTTAGATTCCAAGCCTGTAGATTCATCGCAATCTGTCAGGGTAGCTGTTAATATTAGACCTTTGATAGCATCTGAGCTTCTCGTTGGATGTACGGACTGCATCACTATTGTTCAGGGAGAACCTCAGGTGGTTATTGGCTCTCATGCATTCACTTATGATTACGTTTATGGTAACACCGGATCAGCTCCTTCCACCATATATGAAGATTGTGTTGCTCCACTTGTTGATGCTCTTTTCCACGGCTATAATGCAACTGTTCTTGCTTATGGCCAGACTGGTTCTGGAAAGACATACACTATGGGTACAAATTACAATGGAGATGATATCAATGGTGGAATAATACCTAAAGTAATGGATAATATATATAAAAGAGTCGAGGTAATGAGAAATTCAGTGGAGTTTTTGATCAGAGTATCATTTATCGAGATATTTAAGGAAGAAGTGTTTGATTTGCTCGATTCAAATATATCAGCTATATCCAAAGGTGAAGTGGCTCTTGGTAAACCCTTTGTGCCCATGAGAGCTCCTATTCAAATCAGAGAAACAGTTAATGGAGGGATAACACTAGCAGGTGTCACTGAGGCTGAAGTGAGAACCAAAGAAGAGATGGCCTCATACTTGTCGCGAGGTTCTTTATCTCGCGCAACAGGGAGTACCAACATGAATAGTCAGTCTAGTCGATCACATGCTATATTTACAATTACAATGGAGCAAAAGAAAAGCGCTGGCAGCCTGTCTGGCATATCTCATGATGATACAAGTGATGACATACTATGTGCAAAACTCCATTTGGTGGATCTAGCTGGTTCAGAACGAGCAAAACGAACAGGTGCTGATGGTTTGCGCTTTAAAGAAGGAATTCATATCAATAAGGGTTTGTTGGCTCTTGGCAATGTTATAAGTGCTTTGGGAGATGAGAAGAAAAGAAAAGAAGGAGGCCATGTACCTTATCGAGATAGCAAGCTAACTCGTTTGTTACAGGATTCTTTGGGGGGAAACAGTAAAACCATCATGATTGCATGTGTTAGTCCTGCTGACACAAATGCGGAGGAGACGTTGAATACATTGAAATATGCCAATCGTACTCGTAATATTCAAAACAAGGCAATTGTTAACCGTGATCCTGCGACAGCTCAAATTCAAAGAATGAAGAGCCAAATTGAACAATTGCAATCTGAGCTTCTATTCTATCGTGGTGACGTGGGTGCACCATATGAGGAACTTCAGATTCTTAAACACAAAGTATCAGTACTTGAAGCAAGTAATGCAGAGTTAAAGCAAGAGGTTTTAGGGCTTCAAATTACATGCAAGAATTTAACACAACGTGCTATAGATGCTCAGGTGGAAAAAGACAAACTGGTTATGAAAATCGAGTCTGCCCGAAACGGTAAATCATGGGATGAGATTGACTCCACTTCTGAAAAGGATCATAATTTAATTCAAAATTATGTTTCAAAAATTCAAAAGCTTGAGGCTGAACTATTGCATTTAAGAAACACAAATGACTCAAAGATAAATCGATTTCATGATTGTATGGATACAGACGAAGATAAGGAAGATTGCAAAAATGTTTTGTTTCCACCAAGTGTTTATGCATCTGATTTTGAGCCCAAATCTGGAGATTTTTCAGATGAGATTGAAGATCATGAGAAGGAACTTGAATATTCTTCTCTTCAAGAAAAATTTGACGAGGAGCTTAAAGAACTAGACAAGAAGCTTGAACTGAAGGAGGCTGAAATGAAGCGGTTTGCTGGTGGTGATGCATCAGTGCTTAAACAACATTATGAAAAAAAAGTTCAGGAGTTGGAGATAGAGAAACGAACATTACAGAGAGAAATTGAGGTACTTACATGTAATCTTGCAAATATATCTTCTACATCTGGTGATGGTGCTCAAAAGTTGAAGGAAGAATATCTTCAGAAATTGAATGTACTTGAAGCGCAGGTTTCTGAATTGAAAAAGAAGCAAGATGCTCAATCTCAGTTAGTGAGACAAAAGCAAAAGAGTGATGAAGCTGCAAAGAGATTGCAGGATGAGATCCAAAGAATAAAATCTCAAAAGGTTCAACTGCAGCATAAGATTAAACAAGAGTCTGAGCAGTTTCGGTTATGGAAGGCTTCACGAGAAAAAGAAGTGCTTCAGCTCAAGAAAGAGGGGAGAAGGAATGAGTATGAGATGCACAAGTTGTTGGCCCTGAATCAGAGACAGAAAATGGTTTTGCAAAGGAAAACTGTAGAAGTTGCACTAGCAACAAAAAGATTAAAAGATCTTTTGGAATCTCGAAAGGCTGCTTCACGAGAAACGTCTAATTTCAGAAATGGAAATGGTTCAGGGTTTCAGGTTCTAATGCAAGAAATTGAGCATGAACTTGAAGTCACTGTACATGTGCACGAAGTTCGTTCTGAATATGAGCGGCAAATGGAAGAGAGGGGAAGAATGGCTAAGGAGGCTGCAATGCTTAAGGAAAATAATCAAAGTGACAGTGCACAGTCAATGTCTCCCGGTGCAAGAAATTCAAGAGTTTTTGCGCTTGAAAACATGCTTGCTACTTCATCTAGCATGTTGGTTTCCATGGCATCACAATTGTCAGAGGCAGAGGACCGTGAGCGACTTTTCAGTGGCAGAGGACGTTGGAATCAAGTTCGATCTCTTATTGATGCAAAAAACATAATGAATTTCTTGTTTAATTTAGCATCTTCTTCCAGGTGCTTGTTAAGAGATAAGGAAGTTACCTGCAGAGAAAAAGAGTCGGAAATAAGAGAATTGAAGCAAAAATTATTTGATCTCAATAGTTCGCTCAGAAAATTAGAGATGCAAAAAGTTGAACTTATGCATCAGAATTCAACCTTAAAGAATTACTCCATGAATAGCTCAATGGAACCTCCCAAAAACAGGGGATTTAAGAATGACTCACACAAGCAGGAAATTCGCTCTTCTGTCATCTTGTTGGAGGACATGGATACGTCAGAATCTGAATGTTCTGACATTGATGATACAAGTGATGATGATTGGGTCAATTCAGCAAAACAACAGGCTGTGAGAAAAAGTAGTAAAAGTAATACAGGTTGTTCAAGTATGGCACCATCATCGGGTGGTAATCACTGTCTGACTCCAGCATTAGACGGTTTCGGAGAAGGCATTAGTAGTGTGAATAGCATTACTGCCTCTGCATTGTGTTGCTCCTGCAGGAAAGTTTCGTTGTGCAATACAATCAAATGCCAATGCAGGGCTAATGGAGGTTCTTGTGGATCATCATGTGGTTGTATACTCTCTAAATGTACAAATCGAGATGGGAAAAGTGAGCAGGACGTGCAATCTCAGATGCAAGTTGAAGAAAATGGAAATGGTTCTGAAATTGATGAAACAGATAGAAACCAGGGTCTTGCTTCGCATGGAGCAATGCTACTTCAAAGTGCATTAGCTGACAAGCCTGTCGGGGCTAGGAGAAAAGCTTTATCTGACATTGGCAACACTCTGACTAAGTCAAATATACCAAAGCCAAATCAGAGAAAGAAATGGAGGAAATCAACAATTCAGCTCGTTACTGATGATTCAACTCCAATGCAACCAAACAACAGTGAAGCCATTCAATCCCAGAAGCCAGAAAACAGCACCGGTGAGGTAAACATCCCATTAAAGTTACCCAGAGCAATGAGATCTGCTTCATCAAACGGTGGAGGATTATTGAGAGAGAGGAATTTGAGCCAGATTGATGAATCAGTGGGCAGTAAAGATGGGGGAGTGCTTGTTCCAGCAAGTCCTGTAAGACAGAAGAAGGCCTTGGACGAGAAAGAGAACTGCAGCCTTTAA	3819	39.88	MEVLDSKPVDSSQSVRVAVNIRPLIASELLVGCTDCITIVQGEPQVVIGSHAFTYDYVYGNTGSAPSTIYEDCVAPLVDALFHGYNATVLAYGQTGSGKTYTMGTNYNGDDINGGIIPKVMDNIYKRVEVMRNSVEFLIRVSFIEIFKEEVFDLLDSNISAISKGEVALGKPFVPMRAPIQIRETVNGGITLAGVTEAEVRTKEEMASYLSRGSLSRATGSTNMNSQSSRSHAIFTITMEQKKSAGSLSGISHDDTSDDILCAKLHLVDLAGSERAKRTGADGLRFKEGIHINKGLLALGNVISALGDEKKRKEGGHVPYRDSKLTRLLQDSLGGNSKTIMIACVSPADTNAEETLNTLKYANRTRNIQNKAIVNRDPATAQIQRMKSQIEQLQSELLFYRGDVGAPYEELQILKHKVSVLEASNAELKQEVLGLQITCKNLTQRAIDAQVEKDKLVMKIESARNGKSWDEIDSTSEKDHNLIQNYVSKIQKLEAELLHLRNTNDSKINRFHDCMDTDEDKEDCKNVLFPPSVYASDFEPKSGDFSDEIEDHEKELEYSSLQEKFDEELKELDKKLELKEAEMKRFAGGDASVLKQHYEKKVQELEIEKRTLQREIEVLTCNLANISSTSGDGAQKLKEEYLQKLNVLEAQVSELKKKQDAQSQLVRQKQKSDEAAKRLQDEIQRIKSQKVQLQHKIKQESEQFRLWKASREKEVLQLKKEGRRNEYEMHKLLALNQRQKMVLQRKTVEVALATKRLKDLLESRKAASRETSNFRNGNGSGFQVLMQEIEHELEVTVHVHEVRSEYERQMEERGRMAKEAAMLKENNQSDSAQSMSPGARNSRVFALENMLATSSSMLVSMASQLSEAEDRERLFSGRGRWNQVRSLIDAKNIMNFLFNLASSSRCLLRDKEVTCREKESEIRELKQKLFDLNSSLRKLEMQKVELMHQNSTLKNYSMNSSMEPPKNRGFKNDSHKQEIRSSVILLEDMDTSESECSDIDDTSDDDWVNSAKQQAVRKSSKSNTGCSSMAPSSGGNHCLTPALDGFGEGISSVNSITASALCCSCRKVSLCNTIKCQCRANGGSCGSSCGCILSKCTNRDGKSEQDVQSQMQVEENGNGSEIDETDRNQGLASHGAMLLQSALADKPVGARRKALSDIGNTLTKSNIPKPNQRKKWRKSTIQLVTDDSTPMQPNNSEAIQSQKPENSTGEVNIPLKLPRAMRSASSNGGGLLRERNLSQIDESVGSKDGGVLVPASPVRQKKALDEKENCSL	1272

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
2	956453	964818	+	Bpe007989.1	Bpe02g00139	98288

Annotation

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Bpe02g00139	1272	ProSiteProfiles	Kinesin motor domain profile.	14	368	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
Bpe02g00139	1272	Coils	Coil	483	510	-	-
Bpe02g00139	1272	Coils	Coil	908	942	-	-
Bpe02g00139	1272	MobiDBLite	consensus disorder prediction	1110	1126	-	-
Bpe02g00139	1272	CDD	KISc_KIF4	14	369	-	-
Bpe02g00139	1272	Pfam	Kinesin motor domain	47	368	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
Bpe02g00139	1272	PANTHER	KINESIN-LIKE PROTEIN KIN-4C	10	1248	-	-
Bpe02g00139	1272	Coils	Coil	638	703	-	-
Bpe02g00139	1272	Coils	Coil	595	629	-	-
Bpe02g00139	1272	MobiDBLite	consensus disorder prediction	955	974	-	-
Bpe02g00139	1272	MobiDBLite	consensus disorder prediction	1184	1209	-	-
Bpe02g00139	1272	Gene3D	Kinesin motor domain	9	401	IPR036961	-
Bpe02g00139	1272	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	14	402	IPR027417	-
Bpe02g00139	1272	Coils	Coil	562	582	-	-
Bpe02g00139	1272	PANTHER	CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED	10	1248	-	-
Bpe02g00139	1272	ProSiteProfiles	Sigma-54 interaction domain profile.	482	660	IPR002078	GO:0005524\|GO:0006355\|GO:0008134
Bpe02g00139	1272	Coils	Coil	411	445	-	-
Bpe02g00139	1272	ProSitePatterns	Kinesin motor domain signature.	263	274	IPR019821	GO:0003777\|GO:0005524\|GO:0007018
Bpe02g00139	1272	PRINTS	Kinesin heavy chain signature	222	239	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
Bpe02g00139	1272	PRINTS	Kinesin heavy chain signature	264	282	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
Bpe02g00139	1272	PRINTS	Kinesin heavy chain signature	318	339	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
Bpe02g00139	1272	PRINTS	Kinesin heavy chain signature	84	105	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
Bpe02g00139	1272	Coils	Coil	376	403	-	-
Bpe02g00139	1272	MobiDBLite	consensus disorder prediction	1184	1272	-	-
Bpe02g00139	1272	MobiDBLite	consensus disorder prediction	1110	1133	-	-
Bpe02g00139	1272	Coils	Coil	750	770	-	-
Bpe02g00139	1272	SMART	kinesin_4	12	376	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017

Pathway

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bpe02g00139	-	-	-	zju:107421275	1662.89

Dupl-types

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	Bpe02g00139	Bpe-Chr2:956453	Bpe02g00438	Bpe-Chr2:2854868	0	dispersed
	Bpe02g00139	Bpe-Chr2:956453	Bpe08g01347	Bpe-Chr8:14612296	2.09E-68	transposed

Deco-Alignment

Select	Vvi1	Blo1	Blo2	Bda1	Bda2	Bpe1	Bpe2	Bma1	Bma2	Cmo1	Cmo2	Cma1	Cma2	Car1	Car2	Sed1	Cpe1	Cpe2	Bhi1	Tan1	Cmetu1	Lac1	Hepe1	Mch1	Lcy1	Cla1	Cam1	Cec1	Cco1	Clacu1	Cmu1	Cre1	Cone1	Cone2	Cone3	Cone4	Lsi1	Csa1	Chy1	Cme1	Blo3	Blo4	Bda3	Bda4	Bpe3	Bpe4	Bma3	Bma4	Sed2	Cmo3	Cmo4	Cma3	Cma4	Car3	Car4	Cpe3	Cpe4	Bhi2	Tan2	Cmetu2	Lac2	Hepe2	Mch2	Lcy2	Cla2	Cam2	Cec2	Cco2	Clacu2	Cmu2	Cre2	Lsi2	Csa2	Chy2	Cme2
	Vvi18g515	.	.	.	.	Bpe02g00139	.	.	.	.	.	Cma01g01646	.	.	.	Sed05g1562	.	Cpe07g00170	Bhi04g01382	Tan02g2480	Cmetu04g1739	.	Hepe10g0431	.	Lcy13g1480	.	.	.	.	.	.	.	Cone4ag1297	Cone7ag0858	.	.	Lsi04g02279	Csa03g04492	.	.	.	.	Bda11g00799	.	.	.	.	.	.	Cmo01g01696	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Cla11g01423	Cam11g1479	Cec11g1509	Cco11g1505	Clacu11g1640	Cmu11g1458	Cre11g1876	.	.	.	.

Syn-Orthogroups

Select	Orthogroup	Bda	Bhi	Blo	Bma	Bpe	Cam	Car	Cco	Cec	Chy	Cla	Clacu	Cma	Cme	Cmetu	Cmo	Cmu	Cone	Cpe	Cre	Csa	HCH	Hepe	Lac	Lcy	Lsi	Mch	Sed	Tan	Vvi	Total
	OG0009556	2	1	1	1	1	0	1	1	1	1	1	1	1	1	1	1	1	2	1	1	1	1	1	1	1	1	1	2	1	1	32

Transcriptome

Select	Gene	Chr	Type	da1	da2	da3	da4	da5	da6	da7	da8	da9	da10
	Bpe02g00139	Bpe_Chr02	FPKM	117.755875	121.365959	303.036072	298.121307	82.156616	76.510376	74.55864	355.516022	361.819061	329.825226