Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00143 ATGCCGCATAGAACTACTTACTTCTTTCCAAGGCAGTTTTCTGATCACGCATTGGAACAGGCGTCAACTTCTAAACAGAGGTTAGACCAAGAGACGAAGATAAAAAAAGATGCGTATGACGCAGAAAGCGACGCGAAGTCGATCCCTCGGCTTTCCTGCGAAACAACGGTTACGAAGGCTACTGCTTTATCAGACCTTTTCCCGGAGAACGAGTTTCAAAACAAGGAACAGGTCACTCCCTTCTCCGATTGGTTTGTAGACAAGAAAGCGGCCCGATCGACATCGACTCACGTGAAGACCTGGCTTTCTAACTGCGACGATGGCCGGGAGATACTTCTTTCGTCGCCGACTGTGGAAGCGGAGTCAGAGCCGATGTTTGCTAAAGATAGGAGTGGTGACAGAACCTTTGACCGGCATGCTTCATTGCCCAGGTTATCATGCGGGAGTAGTTATGCTGGAAGCTTATTTTCCGGCGCGGGAATGGAGACAGTAAATGAAATTTCGTCCATAAGTGTTGATTCAACGGCACCACAAATTTCGTCGTCCTTGCCTATTACGAGACCGGAGGAGGTGGAGAGAAGGGAAAACTTGTCGCAAAAGATTAGAGAGAGTTACTATCTACAACTTGCCATGACTAAAAGACTCACTTCCCAGGCTAGCGTTGGTAGCGAGCCGCTGTTTATACAAGAGAGTAGAGTGGAGGTTGCGGATGCTGAAACTGTTTCTTATCGACTTTGGGTTAATGGCTGCTTATCTTACTCGGACAAGATATCAGATGGCTTTTACAATATTTTGGGGATGAATCCATATCTTTGGATGATGTGCAGTGAATTTGAGGAAGGCAGACGAATGCCTCCTCTCATGTCACTTAAAAGAGTTGAATCTGGTGAGACTTCAATGGAGGTGGTTCTTATTGATCGGCAGTGGGACTTGCGCCTGAAAGAACTCGAAGATAAAGCACAAGAATTGTGTTCTTCTTCAGATAATAATCTAGCGTTGGTACAGAAATTGGGAGAACTGGTTGCCGTCTATATGGGCGGGGCCTTTTCAGAGGAGCAAGGAGATCTTCATTTGCACTGGAAATTGGCGAGTAAGAGTTTGAGGGATATTCAGAAATGCATAGTGCTTCCCCTTGGTAGTTTATCAATGGGACTATGCAGGCATCGCGCAATACTTTTCAAGATATTAGCAGATAGCGTTGGTTTGCCATGTCGTATAGCTCGAGGGTGCAAGTACTGTGTTGCACATCATAAGTCTTCTTGCCTAGTTAAAATTGAAGACGACAGAAGGTTTTTGAGGGAATATGTTGTTGACCTTGTTGGTGAACCAGGAAATATACAGGGTCCAGATTCTTTAATTAATGGATATCTGCCTTCTTCAGTGCCTTCTCCATATCAAATTTCTCATCTTAAAGAATTTCAACAATCCTACGTAGACCCTCCCTCATGTTTTCCATCAAAGTCTGCATCTCAACAAATTTTCCCATATTCAGGAATGCAGTTCTCTTCGATGCGCGTTGATATGAAAGCCAATGCTGAAGATTGCTTGCATCAGGGTCAAATGTTGCAATTTCCTGCGGAAAAAGCTGCTGAATTAATTGGTGCTGCTAGTGGGACGTCTTTGCAAAAGAAATGTTTGAGCCTAGTGGAAATGAAATTTGGTTTGCAGGTGGAAGAAAAAGAAAGAGCGGCATTAGGAAGTATAACAATGGATAACAATATGGAACAGCTTAAAGTAACTGCAGCCAGTCTATCGAATCGGAAAAAGATTGAAAGTAATATTGGAAATAAAGGTAGATTTTCAGCTCCAACAGTCCCAAGATACGTAAATCTTGAACCCTCTCTTGCAATGGATTGGCTTGAGATCTCGTGGGATGAATTGCATCTCAAAGAGCGTGTTGGTGCTGGCTCATTTGGTACAGTGCATCGGGCTGAGTGGCATGGATCAGACGTTGCTGTCAAGGTTCTAACTGTGCAGGATTTCCATGAGGATCAGTTGAAGGAGTTTTTAAGAGAGGTTGCAATAATGAAGCGCGTTCGCCATCCAAATTTGGTTCTATTTATGGGTGCTGTTACAAAACGTCCTCATTTGTCGATAGTGACTGAGTACTTGCCAAGGGGTAGTCTATACCGACTGATTCATAGACCAGCTTCTAGTGAGATGCTGGACCAGAGGAGGCGGTTGCGCATGGCATTGGATGTGGCCAAGGGGATCAATTATCTCCATTGCCTTTGTCCTCCCATAGTGCATTGGGATCTTAAATCCCCAAACTTGTTGGTGGACAAAAATTGGACTGTTAAGGTGTGTGATTTTGGCTTGTCCAGATTCAAAGCAAACACTTTTATATCATCAAAATCTGTAGCTGGAACACCTGAGTGGATGGCTCCCGAATTCCTTCGAGGCGAGCCCTCAAACGAAAAGTCTGATGTATATAGTTTTGGGGTGATCCTTTGGGAACTCGTTACGATGCAACAACCTTGGAGCGGACTTGGTCCTGCTCAGGTGGTCGGAGCTGTTGCCTTTCAAAATCGAAGACTTGTTATCCCTCATAATACTTCCCCATTGTTAGCTTCTCTTATTGAAACTTGCTGGGCTGATGATCCTGTTCAACGCCCGTCCTTCAGAAGCATAGTGGACTCACTAAAGAAGCTACTCAAGTCCCCGCAGCAGTTGATAGAGATGAGTGAACTTAGACCCTGA 2700 44.56 MPHRTTYFFPRQFSDHALEQASTSKQRLDQETKIKKDAYDAESDAKSIPRLSCETTVTKATALSDLFPENEFQNKEQVTPFSDWFVDKKAARSTSTHVKTWLSNCDDGREILLSSPTVEAESEPMFAKDRSGDRTFDRHASLPRLSCGSSYAGSLFSGAGMETVNEISSISVDSTAPQISSSLPITRPEEVERRENLSQKIRESYYLQLAMTKRLTSQASVGSEPLFIQESRVEVADAETVSYRLWVNGCLSYSDKISDGFYNILGMNPYLWMMCSEFEEGRRMPPLMSLKRVESGETSMEVVLIDRQWDLRLKELEDKAQELCSSSDNNLALVQKLGELVAVYMGGAFSEEQGDLHLHWKLASKSLRDIQKCIVLPLGSLSMGLCRHRAILFKILADSVGLPCRIARGCKYCVAHHKSSCLVKIEDDRRFLREYVVDLVGEPGNIQGPDSLINGYLPSSVPSPYQISHLKEFQQSYVDPPSCFPSKSASQQIFPYSGMQFSSMRVDMKANAEDCLHQGQMLQFPAEKAAELIGAASGTSLQKKCLSLVEMKFGLQVEEKERAALGSITMDNNMEQLKVTAASLSNRKKIESNIGNKGRFSAPTVPRYVNLEPSLAMDWLEISWDELHLKERVGAGSFGTVHRAEWHGSDVAVKVLTVQDFHEDQLKEFLREVAIMKRVRHPNLVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPASSEMLDQRRRLRMALDVAKGINYLHCLCPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWSGLGPAQVVGAVAFQNRRLVIPHNTSPLLASLIETCWADDPVQRPSFRSIVDSLKKLLKSPQQLIEMSELRP 899
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 987745 993609 - Bpe007993.2 Bpe02g00143 98292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00143 899 Pfam Protein tyrosine and serine/threonine kinase 627 881 IPR001245 GO:0004672|GO:0006468
Bpe02g00143 899 Gene3D Phosphorylase Kinase; domain 1 620 704 - -
Bpe02g00143 899 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1-LIKE ISOFORM X1 115 894 - -
Bpe02g00143 899 SUPERFAMILY Protein kinase-like (PK-like) 603 880 IPR011009 -
Bpe02g00143 899 ProSitePatterns Serine/Threonine protein kinases active-site signature. 748 760 IPR008271 GO:0004672|GO:0006468
Bpe02g00143 899 ProSitePatterns Protein kinases ATP-binding region signature. 633 654 IPR017441 GO:0005524
Bpe02g00143 899 Gene3D Transferase(Phosphotransferase) domain 1 706 894 - -
Bpe02g00143 899 SMART serkin_6 627 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g00143 899 ProSiteProfiles Protein kinase domain profile. 627 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g00143 899 PRINTS Tyrosine kinase catalytic domain signature 808 830 IPR001245 GO:0004672|GO:0006468
Bpe02g00143 899 PRINTS Tyrosine kinase catalytic domain signature 852 874 IPR001245 GO:0004672|GO:0006468
Bpe02g00143 899 PRINTS Tyrosine kinase catalytic domain signature 742 760 IPR001245 GO:0004672|GO:0006468
Bpe02g00143 899 PRINTS Tyrosine kinase catalytic domain signature 701 714 IPR001245 GO:0004672|GO:0006468
Bpe02g00143 899 Pfam Ethylene-responsive protein kinase Le-CTR1 238 446 - -
Bpe02g00143 899 CDD STKc_MAP3K-like 633 881 - -
Bpe02g00143 899 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 115 894 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00143 Bpe04g00415 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00143 Bpe-Chr2:987745 Bpe15g00509 Bpe-Chr15:16319146 5.73E-36 dispersed
Bpe15g00080 Bpe-Chr15:8520551 Bpe02g00143 Bpe-Chr2:987745 5.58E-42 dispersed
Bpe04g01547 Bpe-Chr4:21824958 Bpe02g00143 Bpe-Chr2:987745 0 transposed
Bpe02g00143 Bpe-Chr2:987745 Bpe04g00415 Bpe-Chr4:2673349 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63147 PF07714 PK_Tyr_Ser-Thr 8.80E-64 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00143 - - csv:101204522 1192.95