Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00166 ATGGCTGTCACTTCCTCCAGTAAGGATGCAAATAAGATATCAATGGACAACGGGAAGTATGTAAGGTACACACCTGAACAAGTAGAAGCCCTAGAGAGGGTTTATTATGAATGCCCCAAACCCAGTTCTATTCGTCGCCAACAGCTTATCAGAGAATGCCCCATTCTATGCAACATCGAGCCCAAGCAAATTAAAGTTTGGTTCCAGAACAGAAGATGTAGAGAGAAGCAACGAAAAGAGTCGTCGCGACTGCAAGCAGTGAACAAGAAGCTAACAGCCATGAATAGGCTTTTAATGGAGGAAAACGATCGTTTGCAGAAACAAGTATCACAGCTGGTGTACGACAACACCTTTTTTCGCCAGCAGACTCACAATGCTACTCTAGCCACCAACGACACAAGCTGTGAATCGGTGGTAACAAGTGGTCAACACCATCAAACTTCTCAGCATCCATTAAAGGATGCCAGCCCAGCAGGACTTTTGTCCATTGCGGAGGAGACTTTAACAGAGTTTATTTCAAAGGCTACTGGAACTGCTGTGGAGTGGGTCCAATTGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCCTAGTTCTGCTGGAGTAGCAGCTCGAGCATGTGGCCTTGTTGGCTTAGAACCAACTAGGGTTGTTGAAATCATCAAAGATCGGCCTTTGTGGTTTCGAGATTGCCGAGCAGTGGATGTTCTAAATGTGTTGTCCACAGGAAATGGTGGAACCATTGAACTTCTTTACATGCAGCTCTACTCACCGACAACACTGGCCCCGGCTCGTGATTTCTGGTTGCTCCGCTACACTTCTGTTTTGGAAGATGGCAGTCTTGTGGTCTGTGAAAGATCACTCAAGAATAATCAGAATGGTCCAAGCATGCCACCAGTACAGAATTTTGTTCGAGCCGAAATGTTCCCAAGTGGGTGTTTGATTCGACCATGTGAAGGGGGAGGATCCGTTATTCATATAGTTGATCATATGGATTTAGAGCCTTGGAACGTGCCTGAAGTGTTACGCCCTCTATACCAGTCGTCTACTCTGCTTGCTCAGAAGACCACCATGGCAGCTTTTCGGCTACTGAGGCAGATATCTCAAGAGATTTCTCAGCCGAATGTCTCTGGATGGGGAAGAAAGCCTACTGCTCTGCGTAACCTTTGCCAGAAATTAAGTAGGGGTTTTAACGAAGCCATTAATGGGTTCACATCCGAGGGATGGTCTGTGCTAGAATCTGATGGGGCCGATGATGTTACTCTTCTTGTCAACTCATCCCCTACCAAGATGATGGGAGGAGCTCTGTCTTACGCCAATGGCTTCCCATCCACAGGCTGTGCAGTTCTCTGCGCCAAAGCTTCCGTGTTATTTCAAGATGTGCCTCCAACAATTCTTCTTAGATTTCTTCGAGAAAACCGATCCGAATGGGCAGATAGTAGCATTGATGCTTATTCAGCTGCATCGATTAAAATGAGTCCATGTGTTGCCTTACCTAGTACTCAGCTCGGAGCATATGGCGGGCAGGTTATTCTTCCACTTGCTAACATCATTGAACAAGAAGAGGCAATAAGAATAATTAAAATAAGAATATCGAGCATTTCCATCATTGAATCGCTCGCAATCTCACTATATTTTTTCGTGCATTGCCAGCTTTGCAGTGGAGTGGATGAGAATTCTATCGGCGCTTGTGCTGAACTCATCTTTTCTCCCATTGATGCTCCCTTTCCCGACGATGCCCCTATTTTATCTTCTGGGTTTCGCATAATTTCTCTTGATTCTATGAAGGATGCCTCAAGTCCAAACCGAACGCTTGATCTTACATCAGCTCTTGATGTTGGAAAGGAAGGAAACAAAGGGCTGGGAAATTGTGGTGGACGATACGGAAAATCAAAATCCGTGATGACAATTGCCTTCCAATTTGCATTTGACGTTCATCTTCAAGAGAATGTGTCAGCCATGGCTAGGCAGTATGTGCGGAGCATTATAGCTTCTGTCCAGCGTGTGGCTTTCGCTCTTTCACCTCCTGGTTTTAGCTCTTTCTCTCCTCTTTATTCCCCACCTCAAACTCCCCAAGCTCTCACACTCACCCGATGGATCTGCCATAGTTACAGGTGCTTTTTAGGGGTGGAACTCTTGAAGAATGAAGAAAGAGATTCTCTTCTGAGAACCCTTTGGCATCACTCCGACGCAGTTATGTGCTGCTCTTTGAAGGCACTTCCAGTTTTTACATTTGCAAATCAGGCAGGACTAGACATGCTAGAGACAACCTCAATAGCTCTGAATGGCATAACTCTGGAAATGATCTTTGATGACAATGGAAAAAAGACCTTTTTCTCTGAGTTCCCCCACATACTGGAGCAGGGTTTTGTCTGTCTTCCAGGCGGTTTCTGCTTGTCTAGCATGGGCCGGCCGGTTTCCTACGACCGAGCAGTGGCTTGGAAGGTGCTGAATGAAGAAGAAAATGTTCAGTGCATCTGCTTCATGTTCATCAACTGGTCTTTTGCAGAAAATTAG 2532 45.77 MAVTSSSKDANKISMDNGKYVRYTPEQVEALERVYYECPKPSSIRRQQLIRECPILCNIEPKQIKVWFQNRRCREKQRKESSRLQAVNKKLTAMNRLLMEENDRLQKQVSQLVYDNTFFRQQTHNATLATNDTSCESVVTSGQHHQTSQHPLKDASPAGLLSIAEETLTEFISKATGTAVEWVQLPGMKPGPDSIGIVAISPSSAGVAARACGLVGLEPTRVVEIIKDRPLWFRDCRAVDVLNVLSTGNGGTIELLYMQLYSPTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNNQNGPSMPPVQNFVRAEMFPSGCLIRPCEGGGSVIHIVDHMDLEPWNVPEVLRPLYQSSTLLAQKTTMAAFRLLRQISQEISQPNVSGWGRKPTALRNLCQKLSRGFNEAINGFTSEGWSVLESDGADDVTLLVNSSPTKMMGGALSYANGFPSTGCAVLCAKASVLFQDVPPTILLRFLRENRSEWADSSIDAYSAASIKMSPCVALPSTQLGAYGGQVILPLANIIEQEEAIRIIKIRISSISIIESLAISLYFFVHCQLCSGVDENSIGACAELIFSPIDAPFPDDAPILSSGFRIISLDSMKDASSPNRTLDLTSALDVGKEGNKGLGNCGGRYGKSKSVMTIAFQFAFDVHLQENVSAMARQYVRSIIASVQRVAFALSPPGFSSFSPLYSPPQTPQALTLTRWICHSYRCFLGVELLKNEERDSLLRTLWHHSDAVMCCSLKALPVFTFANQAGLDMLETTSIALNGITLEMIFDDNGKKTFFSEFPHILEQGFVCLPGGFCLSSMGRPVSYDRAVAWKVLNEEENVQCICFMFINWSFAEN 843
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1147422 1152246 - Bpe008017.1 Bpe02g00166 98315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00166 843 SUPERFAMILY Homeodomain-like 18 80 IPR009057 -
Bpe02g00166 843 ProSiteProfiles 'Homeobox' domain profile. 14 78 IPR001356 GO:0003677
Bpe02g00166 843 Pfam START domain 163 371 IPR002913 GO:0008289
Bpe02g00166 843 Pfam Homeodomain 19 77 IPR001356 GO:0003677
Bpe02g00166 843 SMART HOX_1 16 82 IPR001356 GO:0003677
Bpe02g00166 843 CDD bZIP 71 110 - -
Bpe02g00166 843 ProSiteProfiles START domain profile. 153 381 IPR002913 GO:0008289
Bpe02g00166 843 CDD START_ArGLABRA2_like 157 372 - -
Bpe02g00166 843 CDD homeodomain 19 79 IPR001356 GO:0003677
Bpe02g00166 843 SMART START_1 162 372 IPR002913 GO:0008289
Bpe02g00166 843 Gene3D - 11 85 - -
Bpe02g00166 843 Gene3D - 197 368 IPR023393 -
Bpe02g00166 843 PANTHER CLASS III HD-ZIP PROTEIN CNA1 6 840 - -
Bpe02g00166 843 Pfam MEKHLA domain 700 840 IPR013978 -
Bpe02g00166 843 SUPERFAMILY Bet v1-like 162 372 - -
Bpe02g00166 843 Coils Coil 84 108 - -
Bpe02g00166 843 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 6 840 IPR044830 GO:0003700
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00166 Bpe04g00073 CCT
Bpe02g00166 Bpe04g00073 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00166 Bpe-Chr2:1147422 Bpe10g00665 Bpe-Chr10:13226686 0 dispersed
Bpe02g00166 Bpe-Chr2:1147422 Bpe04g00400 Bpe-Chr4:2516029 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20844 PF01852 START 3.90E-50 CL0209 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00166 K09338 - tcc:18587987 1289.25