Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00190 ATGTGTCGGCGTTGTGGTGCAGAGATGACCAAATATGATGATGGGCAATGGGAGAGTAGAAATTCTTCGAAAGTAGATGCTAGTGGTTCCACATTGACTTGCAAGTTTTGTGAGGAGACACCGGAGATAGAGCTTTCAAAGCAAGATAGTTTCAATTCTTGTTCAACCTCGGTGCTAAGTCCAATGTCTTCATTGCCCAGCAGTGATTGCAGTGATTATTCTGGTGAGATGAACTCGAGTGACAGTTTTCATTCTGTCAGGAGTAATCTTGAGGATCTTTCGCTTCGACTAGATATGCTATTGCAAAAGCCAACTGGTGGATATATACGAATTGGAAGTGACAATTCCAATATGATGACAGAGAATTCTAATGAAAGGGATAATAGGAATAATATGTACAAACGGAGCAATACTGAGATTATGAAACCCAATTATTCGGACGAGACGGGTCATAAAATTTCTAGAAATTCAGCAAGTGATGAAACTGAGAGATTTCTCCCCATCTTTGGTGTGACAGACAGTGCAATCTGGGAACTTCCGGGACCAGGAGACCCGGATGATGACATAGAAGGAAGCATTGCTTATGATGACGATGATGACAACGATGAAACAAGTGTGGCTTACAATGATGATGGCAACATTGAAGAGTGTGGTGAGACAACAGAATCTGGCAAGTCAATGTCTTTGAGTTCTATAGAAGGAAGTGCTAGCTTTAAACTTAGAGAGGAGAAACTAAGAGCAATGGAGGAGGTTTATAATGGACGGTTCAGGGGTATCGTATGCCAACTTTTTCAATCTTTTGGAGTTGCTTCGACGGATGAAGATGATGAAAATTGGGCGGACATTGTTGGTTCCTTGTCTTGGGAAGCTGCTTCGTTTTTGAAACCTAACATCTCTGATGGCAAAGCAATGGATCCTGATGGCTACGTAAAAGTTAAATGTGTTGCCATGGGATCTCGCAGCCAAAGTCAATTTATCAAGGGCTTGGTCTTCAAAAAGCATGCATCTCACAAGCACATGCCAACTAAATTTAAAAACCCAAAGTTGCTATTGATCAAAGGAGCGCTTGGGCTGTCTGCAAACGGTTTGCTATCACTTAATGCAATGGAGCAGGAAATGGATCATGAGAAGTCTATAATTGAGATGATTGAAATTTGCCAACCGAATGTGATTTTAGTTGAAAAAACGGTTTCTCGTGACATCCAAGAATCTATTCTCCATAAAGGAATGACGCTTGTTCTTGAGACGAAGCTCCACCGCTTGGAAAGAATTGCTCGTTGTACTGGTTCACCAATCTTATCATCTGATACGATGACGAGTCACAGGCTAAAGCATTGTGACACTTTTTATTTTGAAAAATTTGTAGAAGAACACGTCAGATTTTCCGACGGTGGAAAGCGTTCATGTAAAACATTAATGTTCATTGAGGGCTGTCCTACGCATCGGGGTTGTACGATTTTGCTGAAAGGATCGCATAGTGATGAATTGAAGAGGATTAAGTGCATAGTCCGTTGTGCAGTTGCCATTGCCTACCATTTGATACTTGAAACTTCATTCCTTGTTGACCAGAGTGCTATGTTTACTACCATACCATTTGTGGGTGTGCCAGAATTTATGCCACTCGATCAGCCGTTCCCTGACTTGGTGCCTTGTAGTTCAACTGCATCTCGACTTGAGGAGGCGGCTGACAAAAGTATTCAATCGTCTGTCAATATTCCCACTGCCACTGGGTTCCAACGAGATTCTGAAGAATCAAACTTGGATATGGAAGGCGATTTGGCAATTTCTCACGAAATATATAATCCACTAATTTTTTCTGGTTTTTCTTCCCTGTCACAATCACTTAAAAAGGCTATCCGAGACATTCCTCTTGCCTCCTCTTATTCATCTCTATCGTCTTATTTGGGATTTTATGAAGAAAGACCTAATGATTCGATCTCAGGACCCATTTCCATTCCAATTGTGACAGAGGCAGATCATAGGGATAATGAAAGGAAAGGTGCTTGTGATGAAGAGAAGCCGGTTGGAGAGGCACAACTCCAGCCTTCACCTGCATTCCCTGAAAGACCAACTGAGGTGGAAAAGTCTTGTGGGTATGTTGAGGAGCATAGAAAGAGAGAGGATAACACTAACAGCGAATCTAATTCTCGGAGTATTTTAGTTTTGATGTCAAGCCGAAATTTCTTGCGAGGATCGATATGCGAACAAAGCCATTTTTCCCACATCATGTTCTACAAAAATTTTGATGTTCCACTTGGAAAGTTTCTACGGGAATCTTTATTAAATCAGAAAAACCAGTGCAGTTCATGTGGGGAACCACCTGGAGCTCATTTCTACTACTATGCGCATAATAACAAGCAACTAACAGTCCAAGTCCAACAGATATCAGGAGGTAAATTCTTACCGGGGGAAAAGGAAGGGAAACTTTGGATGTGGAGTCGTTGTGGTAATTGTAAATCGACTAAAGGAACTTCTAATTATACCAAAAGGGTGGTGATTTCACCCGCTGCTCGAGGTTTGTCATTTGGGAAGTTCCTTGAGCTCAGTTTCTCTCACTATTCTTCAAGCAGTAAATTGTCCAGCTGTGGTCATTCATTGTACAGGGACTTCCTCTACTTCTTTGGATTAGGCCCCATGGTTGCTATGTTCAAATATTCTCAGGTTCCAACATATACTGTGTCTGTTCCTCCTCGGAAGCTGGAGTACAGCAATTTAATCAGACAAGAGAAACTTGTCAAATTAACTCAAGATGTGTATATGAAAGGGATGCTTCTGTTCATGGAGATTGAAAATTCTTTGAAAAAGATCAGATCTGAACTTAAAAGCTCGACTTTGAATCTTCAGGGCTCACCAAAAGAGCTTTCTATTGTTGAAGAGATGCTAAAGAGGGAGAGATTTGAATTTGAGGTGAACATTCATAATACACTCGCTGATGATGGGAATCCTGACCCTGTCCACAAGTTTCTCCTCATTAATCGCCTTCTTTGGGAATGTTTGCTGGAATCCTGCGTTTGGGACCGTCGCCTTTCTTCGCTGCTTTCACCTGGTTCTCTGATTTACTTTGCTGCCGCCGAAAAAGAATTGCTAGAACCAGTTAGAAGAAGTGAAGGAACAGAACTTGTGGAACAAAATGATGATATGGGAAGTGATGGTAATGCCCAATCAGCAATTGAGCTAGAGAAATCATTAGAGCAAAATGAACCTACAGATACAACTTCGTCATCAGATTATTGTAGTCAGCAGAACGACAATTTTCTGTTCGACAGTTTAGATGCATCGAAAGAAGGAATTTATCTGAATAAATGGCTATCCAACTTAGGGTCTTTGAATGAGTGGTTCTGGGCACCATTTTCAGAGATTCGGCTGGTAAATATGAAGGACATTAAGAGAAATTATATACCTAAATTTGAAACAGTAAGTACCCATACGGCGGAGTATTTACCCACAGCATACCATCTAATAACTCAAGAAGGATCCAAGCTTCACATTCCTCTTGCGACTGACAGTCATATTGTGTCAGATTATGAGGGTGAACTCTCGAGCATTGTTGCTTGTGTTCTAGCAACGTTGTACGATCTGCCTATCCAAACAGAAATTCCAGATCAGGAAAAGGGCAAACTCAGACCTTCTGCTAAATCGTTTGATAATTTACGCAGCCTGAATCGATTTCCTTCAAATGGATCTTCAGAGTCAGATTCAGTACATTCTTCTGAAAGTTTGAGGTTCTTCAGTTTTGATGGGTTGAATCTGCTTGATTCTTTTGTTCCGGAGACTTTTAGACCGGCAGATCCCGATGGCATCATACGATCACTGGCAAAGGGTAAATATGTTGTTAATTGCCCATATTTCGTTCAGTTTCGTAATCTTCGGAGTCAGTGCTGTCCTTCCGAGTCTCATTACATTGCCTCTCTGAGCCGCTGTAGAAATTGGGAAGCCCAAGGCGGAAAAAGCAAATCATTTTTTGCTAAAACACTTGATGACAGGTTTATTGTAAAGGAGATTAAGAGGACAGAATATGATTCCTTCATGGAGATTGCACCTGATTATTTCAACTATATGAATCAGTCGTTTGAATTGGGGAATCAAACTTGCCTTGCCAAAGTTCTTGGGATTTATCAGGTTATGGTTAGACAGACAAAAACTGGAAAGGAGACGAGGCATGATCTAATGGTAATGGAGAATCTTACATTTGGGTGGAAAATTTGTCGTCAGTACGATCTTAAAGGAGCCCTTCATGCTCGATTCAATTCAGTTGCCAGCGACGTACTTCTCGATCAGAATTTCGTCAATGACATGAATTCATCGCCGTTGTATGTTAGTAACCACGCGAAGCGAATCTTGGAAAGGGCTGTCTGGAATGATACAACTTTCCTCAATTCTATAAATGTGATGGACTATTCTTTACTCGTCGGAGTCGATGCTGAAAGGCGAGTACTTGTATGCGGAATTATCGATTATCTAAGGCAATATACATGGGACAAGCATCTGGAGACATGGGTAAAATCTTCGCTTGTTCCTAAGAATGTTTTGCCGACGGTTATATCTCCGAAAGAGTACAAACGGAGATTCAGAAAGTTCATGTCGACCCATTTCTTGAGCGTCCCCAATCAATGGTGCACGCAGAAGAGTGATTCTGACGACCCGTGTAGACTTTGTGGCGGCAGAGGAGATGATTTAGGCAAAGGTGAACAAACTGTTTTTGCTTCTTGA 4710 41.36 MCRRCGAEMTKYDDGQWESRNSSKVDASGSTLTCKFCEETPEIELSKQDSFNSCSTSVLSPMSSLPSSDCSDYSGEMNSSDSFHSVRSNLEDLSLRLDMLLQKPTGGYIRIGSDNSNMMTENSNERDNRNNMYKRSNTEIMKPNYSDETGHKISRNSASDETERFLPIFGVTDSAIWELPGPGDPDDDIEGSIAYDDDDDNDETSVAYNDDGNIEECGETTESGKSMSLSSIEGSASFKLREEKLRAMEEVYNGRFRGIVCQLFQSFGVASTDEDDENWADIVGSLSWEAASFLKPNISDGKAMDPDGYVKVKCVAMGSRSQSQFIKGLVFKKHASHKHMPTKFKNPKLLLIKGALGLSANGLLSLNAMEQEMDHEKSIIEMIEICQPNVILVEKTVSRDIQESILHKGMTLVLETKLHRLERIARCTGSPILSSDTMTSHRLKHCDTFYFEKFVEEHVRFSDGGKRSCKTLMFIEGCPTHRGCTILLKGSHSDELKRIKCIVRCAVAIAYHLILETSFLVDQSAMFTTIPFVGVPEFMPLDQPFPDLVPCSSTASRLEEAADKSIQSSVNIPTATGFQRDSEESNLDMEGDLAISHEIYNPLIFSGFSSLSQSLKKAIRDIPLASSYSSLSSYLGFYEERPNDSISGPISIPIVTEADHRDNERKGACDEEKPVGEAQLQPSPAFPERPTEVEKSCGYVEEHRKREDNTNSESNSRSILVLMSSRNFLRGSICEQSHFSHIMFYKNFDVPLGKFLRESLLNQKNQCSSCGEPPGAHFYYYAHNNKQLTVQVQQISGGKFLPGEKEGKLWMWSRCGNCKSTKGTSNYTKRVVISPAARGLSFGKFLELSFSHYSSSSKLSSCGHSLYRDFLYFFGLGPMVAMFKYSQVPTYTVSVPPRKLEYSNLIRQEKLVKLTQDVYMKGMLLFMEIENSLKKIRSELKSSTLNLQGSPKELSIVEEMLKRERFEFEVNIHNTLADDGNPDPVHKFLLINRLLWECLLESCVWDRRLSSLLSPGSLIYFAAAEKELLEPVRRSEGTELVEQNDDMGSDGNAQSAIELEKSLEQNEPTDTTSSSDYCSQQNDNFLFDSLDASKEGIYLNKWLSNLGSLNEWFWAPFSEIRLVNMKDIKRNYIPKFETVSTHTAEYLPTAYHLITQEGSKLHIPLATDSHIVSDYEGELSSIVACVLATLYDLPIQTEIPDQEKGKLRPSAKSFDNLRSLNRFPSNGSSESDSVHSSESLRFFSFDGLNLLDSFVPETFRPADPDGIIRSLAKGKYVVNCPYFVQFRNLRSQCCPSESHYIASLSRCRNWEAQGGKSKSFFAKTLDDRFIVKEIKRTEYDSFMEIAPDYFNYMNQSFELGNQTCLAKVLGIYQVMVRQTKTGKETRHDLMVMENLTFGWKICRQYDLKGALHARFNSVASDVLLDQNFVNDMNSSPLYVSNHAKRILERAVWNDTTFLNSINVMDYSLLVGVDAERRVLVCGIIDYLRQYTWDKHLETWVKSSLVPKNVLPTVISPKEYKRRFRKFMSTHFLSVPNQWCTQKSDSDDPCRLCGGRGDDLGKGEQTVFAS 1569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1316194 1323292 - Bpe008040.1 Bpe02g00190 98339

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00190 1569 Gene3D - 1397 1532 - -
Bpe02g00190 1569 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1313 1475 IPR002498 GO:0016307|GO:0046488
Bpe02g00190 1569 SUPERFAMILY SAICAR synthase-like 1273 1531 - -
Bpe02g00190 1569 Pfam TCP-1/cpn60 chaperonin family 274 519 IPR002423 GO:0005524
Bpe02g00190 1569 MobiDBLite consensus disorder prediction 664 694 - -
Bpe02g00190 1569 Gene3D GroEL 321 490 IPR027409 -
Bpe02g00190 1569 SUPERFAMILY GroEL apical domain-like 322 490 IPR027409 -
Bpe02g00190 1569 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1213 1531 IPR002498 GO:0016307|GO:0046488
Bpe02g00190 1569 SMART PIPK_2 1248 1532 IPR002498 GO:0016307|GO:0046488
Bpe02g00190 1569 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1258 1394 IPR027484 -
Bpe02g00190 1569 CDD PIPKc_PIKfyve 1282 1531 IPR044769 GO:0000285
Bpe02g00190 1569 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 164 1551 - -
Bpe02g00190 1569 PANTHER 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1D-RELATED 164 1551 - -
Bpe02g00190 1569 CDD Fab1_TCP 259 523 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00190 K00921 PIKFYVE, FAB1; 1-phosphatidylinositol-3-phosphate 5-kinase [EC:2.7.1.150] - cit:102608890 1588.55
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe02g00190 Bpe04g00380 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00190 Bpe-Chr2:1316194 Bpe09g00047 Bpe-Chr9:309572 2.61E-64 dispersed
Bpe02g00190 Bpe-Chr2:1316194 Bpe04g00380 Bpe-Chr4:2393596 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1304 Blo01g01752 . . Bda03g00414 Bpe02g00190 Bpe04g00380 Bma04g00391 Bma01g02535 . . . Cma09g01172 . . . Cpe06g00918 . . . . . . . . . . . . . . . . . . Cone20ag0680 . . . . . . Bda11g00850 . . . . . . . Cmo09g01170 . . . Car09g01046 . . Bhi09g01620 . . . . . . Cla09g00997 Cam09g1055 Cec09g1057 Cco09g1071 . . Cre09g1019 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004019 2 1 2 1 2 1 2 1 1 1 1 1 2 1 1 2 1 2 1 1 1 1 1 1 1 0 0 7 3 1 43
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe02g00190 Bpe_Chr02 FPKM 4.595897 5.407844 2.967533 2.315704 14.866566 12.176807 12.351098 1.492517 1.279952 1.191768