Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00194 ATGGTTGTTCATTTCTTTCTGTGTTTATGGTTTCAGCTGGAAGAGAAGAACTTCACAAGACTCTGCTCGACGAAGAGCATGTTGGTCGTAAATGGCATGTTTCCTGGTCCGACGATCCATGTTCGTAAAGGCGACACGGCTTTCGTAAATGTCATCAACAAAGGATCTTATGGCGTCACACTTCACTGGCATGGAGTGAAGCAGCCGAGGAATCCATGGTCGGATGGGCCAGAAAACATAACGCAGTGTCCGATAAAACCAGGCCATAATTTCACGTACGAGGTTATATTCTCAACTGAAGAAGGGACCCTTTGGTGGCACGCTCACAGTGACTGGACTCGGGCCACCGTGCATGGCGCGATTGTCATTTTACCGACCATCGGAGACTCTTTCCCTTTCCCCAAACCTTACGCAGAAAAAGTCATATTGACAGGTGAATGGTACAAAGGAAGTGTCATGGAAATAATAACCACTGCCTTAGCATCAGGTGGTGACCCAAATACATCTGATGCCTTCACCATCAATGGTTTCGTGGGATCATTATCCAACTGTTCTTCAGATCTGACGTACAACTTGACAGTAACTCAAGGAAAGACCTATCTTCTGAAAGTAATCAATGCAGCGATGAATGAAGCCCACTTCTTTGGAATAGCTAATCATACAGTAACTGTCGTAGCTCAAGATGGTGCCTATATAAAACCCTTCGCTTCATCTTATATAATGATAACTCCAGGCCAGACCATGGATCTTTTACTCACAGCAAATCAATCTCGAAGCTACTACTACATGGCCGCTTATCCATTCTTTGATAGTGCAGCTCTCTATGACAATTTCACAGTCACAGCAGTGGTGAAATATGAAGGAAACTACACTCCTCCATCGTCTCCTGCGTTTCCAGATCTGCCTGAAACTACGAATGAAACTGCTGCTTTTGAGTTTGGGAAGAAAATCAAGGCCTTGGCTACTGAGAAATATCCTATTAATTTTCCCAGGGGTTCGGTTGATGAGAAGATGTTAATTACTGTTTCTATTGCTGAGATTTTATGTGCAAATTCTTCCTGTAGTGGACCAGACGGTAATAGAATTTCTTCTAGCTTAAACAACATAAGCTTTGACACCCCCAGTATTGATGTTTTGCAAGCATACGTGAGGAATATCTCAGGAGTCTACGACCCGACTTTCCCAGACTACCCACCCTACTTTTATAACTTCACAGGAGATGTTGGAAATAACACTCGACATCCAACAGTTGCGACGAGAGCCAAGGTGTTTGACTTTAACGCATCAGTTGAAGTTGTTTTCCAAGGCACCAACGTTATTGCTGCTGAGAGCCATCCCATTCATCTCCATGGATTCAGCTTCTTCTTGGTCGGGAGTGATTTCGGAAACTTTAATGATTCTAGCAACCAAACCTACAACTTGGTTGATCCTCCGGAAATTAACACTTTTTCTCTTCCGAGAAACGGTTGGTCGGCCATTCGATTCTATGCCGCCAATCCCGGAGAATGGTGGAAGAAGGACATAAAGCAGGTTTATGAGCTCTTTCGGAGAACCGGAGGAGACCCCAACGTCTCTAATGCTCTGACAATCAATGGTCAACCTGGCGACCTCTATCACTGTTCAAGATCAAAAACATTCAAGCTAGCTGTGGATGAAGGAAAGTCTTATCTTCTCCGGTTCGTCAACGCCGCCATGAACATCATCTTCTTCTTCTCCATCTCAAATCACAACCTCACAGTTGTCGGAATAGACGGAAGCTACACAAAGCCGTTATCTACAGATTTCATCGTCATCTCTCCCGGCCAAACCCTAGACGCTTTGCTTTACACAGACCAAAACCCTAATCATCGTTATTACATGGCAGGTAGGGCTTACGCAAGTAACCTGAATGTCTCTTTTGATAACACCACTACTACAGCTATTCTGGAGTATAAACAGAGAAGTTCCTGTAACAGAAGTTCATCTCCTTTGTTCCCTTATCTTCCTTATTACAACGACACAAACGCCAGTTTCAGCTTTTTTGGAGCCCTCAGAAGCTTAGTTGACGAAGAACATCCCATTTATCTTCCTCTAAATACAACAACCAATCTGGTTTCCACTGTTTCTATCAATACTTTTCCTTGTGAACGTAATAATTCTTGTGAAGGTCCTAATGGCACTCGCCTAGCAGCTAGCATGAACAACATAAGCTTTGTACTTCCATCGGTGGACATCTTAGAAGCTTATTACTATCACATTCATCGGGTTTTCAGCAAGAACTTTCCGAGTTTTCCACCGTATGTCTTTAATTACACGGCCGATTATCTACCGTTGATCTTGGAGATACCGAAAAGGGGGACAAGGGTGAAAGTTCTCCATTACAATTCGGCAGTCGAACTCGTTTTGCAAGGAACAAACGTTGTTGCTGCGCTTGACCATCCTATGCATCTTCATGGATATAGCTTCTACGTTGTTGGATTTGGATTTGGGAACTTTAATGAATCTACAGATCCTATGAATTACAATCTTGTTGACCCTCCTCGTAGAAATACAGCTACTGTTCCAATAAATGGATGGATTGCCATCAGATTCATCGCGAACAATCCAGGAGTTTGGTTCATGCATTGCCATTTTGAGAGGCACTTAACATGGGGAATGGAGACAGTGTTCATGGTAAGGAATGGGAAAAAGAGAGGAGAAAAGATATTACCTCCACCCCCAGACATGCCTCCCTGCTGA 2718 43.56 MVVHFFLCLWFQLEEKNFTRLCSTKSMLVVNGMFPGPTIHVRKGDTAFVNVINKGSYGVTLHWHGVKQPRNPWSDGPENITQCPIKPGHNFTYEVIFSTEEGTLWWHAHSDWTRATVHGAIVILPTIGDSFPFPKPYAEKVILTGEWYKGSVMEIITTALASGGDPNTSDAFTINGFVGSLSNCSSDLTYNLTVTQGKTYLLKVINAAMNEAHFFGIANHTVTVVAQDGAYIKPFASSYIMITPGQTMDLLLTANQSRSYYYMAAYPFFDSAALYDNFTVTAVVKYEGNYTPPSSPAFPDLPETTNETAAFEFGKKIKALATEKYPINFPRGSVDEKMLITVSIAEILCANSSCSGPDGNRISSSLNNISFDTPSIDVLQAYVRNISGVYDPTFPDYPPYFYNFTGDVGNNTRHPTVATRAKVFDFNASVEVVFQGTNVIAAESHPIHLHGFSFFLVGSDFGNFNDSSNQTYNLVDPPEINTFSLPRNGWSAIRFYAANPGEWWKKDIKQVYELFRRTGGDPNVSNALTINGQPGDLYHCSRSKTFKLAVDEGKSYLLRFVNAAMNIIFFFSISNHNLTVVGIDGSYTKPLSTDFIVISPGQTLDALLYTDQNPNHRYYMAGRAYASNLNVSFDNTTTTAILEYKQRSSCNRSSSPLFPYLPYYNDTNASFSFFGALRSLVDEEHPIYLPLNTTTNLVSTVSINTFPCERNNSCEGPNGTRLAASMNNISFVLPSVDILEAYYYHIHRVFSKNFPSFPPYVFNYTADYLPLILEIPKRGTRVKVLHYNSAVELVLQGTNVVAALDHPMHLHGYSFYVVGFGFGNFNESTDPMNYNLVDPPRRNTATVPINGWIAIRFIANNPGVWFMHCHFERHLTWGMETVFMVRNGKKRGEKILPPPPDMPPC 905
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1356348 1364744 + Bpe008044.1 Bpe02g00194 98343

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00194 905 SUPERFAMILY Cupredoxins 501 682 IPR008972 -
Bpe02g00194 905 Pfam Multicopper oxidase 14 125 IPR011707 GO:0005507
Bpe02g00194 905 ProSitePatterns Multicopper oxidases signature 1. 863 883 IPR033138 -
Bpe02g00194 905 SUPERFAMILY Cupredoxins 9 149 IPR008972 -
Bpe02g00194 905 CDD CuRO_2_LCC_plant 501 644 IPR034285 -
Bpe02g00194 905 PANTHER LACCASE-15 501 905 - -
Bpe02g00194 905 PANTHER LACCASE-15 13 501 - -
Bpe02g00194 905 ProSitePatterns Multicopper oxidases signature 2. 868 879 IPR002355 GO:0005507
Bpe02g00194 905 Gene3D - 348 502 IPR008972 -
Bpe02g00194 905 Gene3D - 710 905 IPR008972 -
Bpe02g00194 905 Gene3D - 8 125 IPR008972 -
Bpe02g00194 905 Pfam Multicopper oxidase 777 888 IPR011706 GO:0005507|GO:0016491
Bpe02g00194 905 SUPERFAMILY Cupredoxins 358 504 IPR008972 -
Bpe02g00194 905 CDD CuRO_1_LCC_plant 11 125 IPR034288 GO:0005507
Bpe02g00194 905 CDD CuRO_2_LCC_plant 141 286 IPR034285 -
Bpe02g00194 905 PANTHER MULTI-COPPER OXIDASE 13 501 IPR045087 -
Bpe02g00194 905 PANTHER MULTI-COPPER OXIDASE 501 905 IPR045087 -
Bpe02g00194 905 SUPERFAMILY Cupredoxins 133 308 IPR008972 -
Bpe02g00194 905 Pfam Multicopper oxidase 140 289 IPR001117 -
Bpe02g00194 905 Pfam Multicopper oxidase 501 646 IPR001117 -
Bpe02g00194 905 TIGRFAM laccase: laccase 11 503 IPR017761 GO:0046274|GO:0048046|GO:0052716
Bpe02g00194 905 TIGRFAM laccase: laccase 501 905 IPR017761 GO:0046274|GO:0048046|GO:0052716
Bpe02g00194 905 SUPERFAMILY Cupredoxins 716 905 IPR008972 -
Bpe02g00194 905 CDD CuRO_3_LCC_plant 749 888 IPR034289 GO:0005507
Bpe02g00194 905 Gene3D - 137 322 IPR008972 -
Bpe02g00194 905 Gene3D - 503 682 IPR008972 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00194 K05909 E1.10.3.2; laccase [EC:1.10.3.2] - ming:122093772 694.115
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00194 Bpe-Chr2:1356348 Bpe04g01793 Bpe-Chr4:23418529 2.39E-124 dispersed
Bpe02g00194 Bpe-Chr2:1356348 Bpe15g00426 Bpe-Chr15:15780045 5.11E-121 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1313 . . . . Bpe02g00194 . . Bma01g02529 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bda11g00854 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0016713 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe02g00194 Bpe_Chr02 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0