Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00202 ATGGGGAAGAAGCGTAAGTCCATCGCCTCTAGCCTCGACGAGGTCGATCGAACCATGTACGCCTCTTTTTGCAGTGCGGCTAACTCCCTCTCCCAACTCTATACCCAGGCTATGAACCATCAGAAGTTATCCTTCCAAGCTGGGGAACGTCACGCTATGGAAAAACTTTATCAGTGGATCTGGAGGCAGCAAGAAGGAGGACCGAGAGTTACTACAAGTGACGTACTTAGTTTCTTACAGAATGAGCTGGACTACAATGGGGAGGAACCATCAATGTCTCCAAGGGCCGCGCCCATTCATCATCAGCAGTCTCAACCTTTCATGAACTCAGGTTTTCCCCTGTCTTCAGGATCTTCAGGTCCAACCACTACAGGGCAAGGAGTTCGATCCGAACACTCCGAGAGTCAATCAAAAAATTCAGTATTCTCTAACGCATTGTCCAGCCCCGTTCGTCGCAGTCTCCAGGACTATCACCTAGCTCAGGGAGCTTACAACCCAAACAGTGGTGGTCCGCACTCGGGAAACAGCGTCCGGAACAACGAACCAAGTTATCTTCAGCATCAGACCGGGAATATAAATCCTGTGACTTCAAACGATTCTTCCATGGAAGACAGTCCTAACGAATCGACTTATTAA 636 49.06 MGKKRKSIASSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAMEKLYQWIWRQQEGGPRVTTSDVLSFLQNELDYNGEEPSMSPRAAPIHHQQSQPFMNSGFPLSSGSSGPTTTGQGVRSEHSESQSKNSVFSNALSSPVRRSLQDYHLAQGAYNPNSGGPHSGNSVRNNEPSYLQHQTGNINPVTSNDSSMEDSPNESTY 211
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1411502 1414331 + Bpe008052.1 Bpe02g00202 98351

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00202 211 PANTHER HOLOCARBOXYLASE SYNTHETASE 1 205 - -
Bpe02g00202 211 MobiDBLite consensus disorder prediction 86 149 - -
Bpe02g00202 211 MobiDBLite consensus disorder prediction 97 149 - -
Bpe02g00202 211 Pfam Domain of unknown function (DUF4588) 16 201 IPR029196 -
Bpe02g00202 211 MobiDBLite consensus disorder prediction 161 211 - -
Bpe02g00202 211 PANTHER NUCLEAR RECEPTOR FAMILY 2 GROUP C PROTEIN 1 205 - -
Bpe02g00202 211 PIRSF UCP009193 1 205 IPR016549 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00202 - - - hbr:110652960 295.434
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe02g00202 Bpe04g00367 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00202 Bpe-Chr2:1411502 Bpe04g00367 Bpe-Chr4:2306547 8.71E-134 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1340 Blo01g01741 Blo12g00775 . Bda03g00403 Bpe02g00202 Bpe04g00367 . Bma01g02519 . . . . Car01g00860 . . Cpe06g00910 . . . . . . . . . . . . . . . . . . . . . . . . . Bda11g00863 . . . . . Sed07g2827 . . . . . . . . Bhi09g01539 Tan01g3074 Cmetu01g0774 . . Mch11g1488 . Cla09g00950 Cam09g1001 Cec09g1004 Cco09g1014 . . Cre09g0965 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003826 3 1 2 2 2 1 3 1 2 1 1 1 2 0 1 3 1 3 2 1 1 1 1 1 2 1 1 1 1 2 45
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe02g00202 Bpe_Chr02 FPKM 0.0 0.0 0.596647 0.927934 33.234322 35.237755 29.516657 0.0 0.0 0.0