Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00214 ATGGAGGGTGATTCTACTGTCTTTGAAGTCTCCGGTGAGGCGGTGGCTGCGCCACCGGAAGTTGCAGAAGGTGGGTCAAATTCCGGTGACGAAGATAAGGGTAGAGATGATGAAGGGGACAAGAATTATGGAGGAAATCGCTGGCCTCGTCAAGAAACATTGGCGTTGTTGAAGATTCGCTTCGATATGGATTCAGTTTTCCGTGATTCAACTCTTAAAGGTCCTTTGTGGGAAGATGTCTCAAGGAAGCTAGGAGAGCTTGGATACAGCCGAAGTGCAAAGAAATGCAAAGAGAAATTCGAGAATGTATACAAATATCACAAGAGGACTAAAGAAGGAAGAAGTGGGAAAAAATCAGAAGGAAAAACCTATCGATTTTTCAATGAAATTGAAGCTCTTGAGAATCTTCACCCTCCTCAACAATGTCTTCCCAAACCTCAAACATCGCTCACAATTCTTCCGCCATGGACGACTGTCCCGTCCTCTCATTTTCATCAGCCTTTTCCAGTTCCATCCCCCGCCACCGTATTACCAAAGCCTTTGAATTCAAATTTCCCACCTCCTCAATCAAACCTTATCAACAATTTTTCGCGAAACTTCTCCCCGGAAAACGGGAATTTTCTTTTCTCTAGCTCGACTTCGTCGTCGACCGCTTCAGACGAGGAGCTCGGGGGGAGACGGAAGAGGAAGAGGAAGTGGAAGACCTTCTTTAGGAGGATGGCTGAGGAGGTTATGGCTAAACAAGAGGGCTTGCAGATGAAATTCTTGGAGGCGTTGGAGAAGATAGAACACCAAAGAATTGTTAAAGAAGAGAGTTGGAGAATTCAAGAAATGGCGAGAATTAACAAAGAACATGAAATTTTAGTCCAAGAGATTTCCACTGCGACAGCAAAAGATGCAGCTATGGTTTCATTTTTGCAAAAGATCATGTCTGCTCAGCCGGATCAAACCCAATCAAAGGGAATTCCTCTTTCATTGCCTCCATTGTTACAACCTCCGCCGCCCCCGCCTGCAATTCCTCCGCCAAATTTGGACATCAGAAGGATCGAAAATGGGGGAAATTTGACACCCTTATCCGCCTCAAGATGGCCCAAAGCAGAAGTGCAAGCTCTGATAAGCCTTAGAACAGGTCTTGATATGAAATATCAAGAAAATATACCAAAAGGGCCACTGTGGGATGACATTTCAATGGCGATGAAAAAGCTCGGATTCAACAGAAGCTCTAAGAGATGCAAAGAGAAATGGGAGAATATAAACAAGTACTTCAAAAAAGTGAAGGAAAGCAACAGGAAAAGGACTGAAGATTCAAAGACTTGTCCATATTTCCAGCAACTTGATATGTTATATAGAGAGAAGAAGAAAACGGAAAGCTCATTCGTACCACAAATGGTGCCGTTGATGGTCCCACCGGAGCAGCAATGGCCTCTTCCACAACAAAAACAGCTAAACACTGAAATAGAAAATGGGCAACCTAATCAAGAAGGAGAAAAACAAGAAGAAGAGGAAGAGGAGGAAGCAGAAGCAGAAGAAGAAGAAGAAGAAGAAGAAGTCAGTGAAGAAGATGCTGAAGGTGGCAGCTTTAAAATTGTCACAAACAAATCATCTTCCATGAACGCTGTCAATTGA 1626 43.6 MEGDSTVFEVSGEAVAAPPEVAEGGSNSGDEDKGRDDEGDKNYGGNRWPRQETLALLKIRFDMDSVFRDSTLKGPLWEDVSRKLGELGYSRSAKKCKEKFENVYKYHKRTKEGRSGKKSEGKTYRFFNEIEALENLHPPQQCLPKPQTSLTILPPWTTVPSSHFHQPFPVPSPATVLPKPLNSNFPPPQSNLINNFSRNFSPENGNFLFSSSTSSSTASDEELGGRRKRKRKWKTFFRRMAEEVMAKQEGLQMKFLEALEKIEHQRIVKEESWRIQEMARINKEHEILVQEISTATAKDAAMVSFLQKIMSAQPDQTQSKGIPLSLPPLLQPPPPPPAIPPPNLDIRRIENGGNLTPLSASRWPKAEVQALISLRTGLDMKYQENIPKGPLWDDISMAMKKLGFNRSSKRCKEKWENINKYFKKVKESNRKRTEDSKTCPYFQQLDMLYREKKKTESSFVPQMVPLMVPPEQQWPLPQQKQLNTEIENGQPNQEGEKQEEEEEEEAEAEEEEEEEEVSEEDAEGGSFKIVTNKSSSMNAVN 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1489665 1491836 + Bpe008062.1 Bpe02g00214 98363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00214 541 PANTHER - 21 538 - -
Bpe02g00214 541 MobiDBLite consensus disorder prediction 1 47 - -
Bpe02g00214 541 CDD GT1 361 426 - -
Bpe02g00214 541 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2 21 538 - -
Bpe02g00214 541 MobiDBLite consensus disorder prediction 496 521 - -
Bpe02g00214 541 Gene3D - 48 109 - -
Bpe02g00214 541 Gene3D - 363 424 - -
Bpe02g00214 541 ProSiteProfiles Myb-like domain profile. 40 104 IPR001005 -
Bpe02g00214 541 MobiDBLite consensus disorder prediction 474 491 - -
Bpe02g00214 541 CDD GT1 46 111 - -
Bpe02g00214 541 SMART sant 44 106 IPR001005 -
Bpe02g00214 541 SMART sant 359 421 IPR001005 -
Bpe02g00214 541 Coils Coil 492 523 - -
Bpe02g00214 541 MobiDBLite consensus disorder prediction 474 541 - -
Bpe02g00214 541 ProSiteProfiles Myb-like domain profile. 361 419 IPR001005 -
Bpe02g00214 541 Pfam Myb/SANT-like DNA-binding domain 46 133 IPR044822 -
Bpe02g00214 541 Pfam Myb/SANT-like DNA-binding domain 361 447 IPR044822 -
Bpe02g00214 541 MobiDBLite consensus disorder prediction 209 228 - -
Bpe02g00214 541 MobiDBLite consensus disorder prediction 26 45 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00214 Bpe-Chr2:1489665 Bpe04g00352 Bpe-Chr4:2233294 0 dispersed
Bpe02g00214 Bpe-Chr2:1489665 Bpe02g00215 Bpe-Chr2:1497717 1.11E-141 tandem
Bpe02g00214 Bpe-Chr2:1489665 Bpe04g00350 Bpe-Chr4:2226258 2.89E-154 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20852 PF13837 Myb_DNA-bind_4 3.40E-20 CL0123 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00214 - - zju:107421675 506.908