Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00215 ATGCTGGGCGACTCGAGTGTCAGCTCCGGTGACGCCACGCCTCCTGTTCCGCCGTTGCTGCTGCCTCACAGCCATGATGCCGTCTCCGATGCTGGAGGCGCTGCAGCTTCCAATTCGGCTGAAGAAGATGGAGGGAGAGGCGGGGATGAAGGGGACCGGAGTTTCGGCGGTAATAGGTGGCCGAGACAAGAGACCTTAGCTCTTTTGAAGATTCGCTCCGATATGGATGTTGCCTTCCGAGATGCAAGCGTTAAGGGTCCATTGTGGGAAGAAGTTTCCAAGAAACTCTCAGAGCTTGGATATCATCGAAGCTCCAAAAAATGCAAAGAGAAATTCGAAAACGTTTACAAATATCACAAAAGAACTAGAGAAGGGAGAAGCGGAAAACCAGATGGAAAAACCTACAAATTTTTCGATCAACTAGAAGCACTGGAAAGTCAGTTTCCTTCACTACAGTCCCCCTCTTCTTCACAGCAACCTAGACCTCAAGGTTCAATGGCTGCTACAACAATGGCTCAGGGGATCACCGTTACTAACCCTCAAACAATGTCTCAAAGCTCTACTGTTCCATCAATGGCGGTTCATCACTTAATGGGTATGTCTCAAACATTTCCTTCGTTTCAACATGGCAACCCGGCTATTTTTCCTCCGCCTTCTCAACCAAACCCTACAAATAATCCATTTCAAGCCGCCATTTCATCCTCTTTTCAGAACGTCGCCGCAGATCTTATTTCGAATTCTTCTTCTTCGTCAACCTCGTCGGATGAAAAATTGGAGAGCCGGAGGAGAAGAAAGAGGAAATGGAAGGACTTTTTCGAGAAGTTAATGAAGGAGGTGATCCAAAAGCAAGAAGAGCAGCAGAAAAAATTCTTGGAAGCGGTGGAGAAACGCGAACACGAAAGAATGGTCAGAGAAGAAGCTTGGAGGGCTCAGGAAATGGCGAAAATCAATAGGGAGAGAGAAATTCTCTCTCAAGAACGATCAATGGCTGCAGCTAAAGATGCTGCGCTAATGTCGTTTCTACAGAAGATATCCGAACAGCAAATCCAAAACCCTGGCCAGATTCTGAATTTCAGTCTTCCCCCATTGCAGCCACCGCCTCCAGCTCCGCCTCCGCAATCTGCGGCACCTCCTCCTCGATCCTTACAGTCGCCTGCAACGCCTTCAGGCCCACCAGGACCACTAGCAGTAAAACGGGCATCGACGGAATTAATCGAAGCAACACCTAAAACTGATAATGGCGACAATTACGAAGCGGCAACTTCTTCAAGATGGCCCAAAGTGGAAGTTGAAGCTCTGATAAGTTTACGTACAAATCTTGATTCTAAGTATCAAGAAAGTGGGCCAAAAGGGCCATTGTGGGAGGAGATCTCAGCCGCCATGCGAAAACTTGGATATAATCGAAATGCAAAGAGGTGTAAAGAGAAATGGGAGAACATCAACAAATACTTCAAAAAAGTGAAGGAAAGCCACAAGAAAAGGTCCGAGGATTCAAAAACATGCCCCTATTTTCACCAGCTCGACGCATTGTACAGAGAAAAAAACAAGTTTGAGAGTTCGTCGTCAAACTTATTCAGGCCTGACAGTTCAATTGTGCCGCTAATGGTCCGACCTGAGCAGCAATGGCCACCCCAACCGCAACCTGACTCCGGCAATGACGACGTGGAAAGCGAGCCAATCGATCAACGCCAGGAAAATGATGACAAAGAAGGAGAAGACGAGGAAGAAGACGATGAAAGTGGTGGAAATTACGAAATTGTCGCAACCAAACCAGCTTCAGTGGGTGCAACCGGA 1794 47.44 MLGDSSVSSGDATPPVPPLLLPHSHDAVSDAGGAAASNSAEEDGGRGGDEGDRSFGGNRWPRQETLALLKIRSDMDVAFRDASVKGPLWEEVSKKLSELGYHRSSKKCKEKFENVYKYHKRTREGRSGKPDGKTYKFFDQLEALESQFPSLQSPSSSQQPRPQGSMAATTMAQGITVTNPQTMSQSSTVPSMAVHHLMGMSQTFPSFQHGNPAIFPPPSQPNPTNNPFQAAISSSFQNVAADLISNSSSSSTSSDEKLESRRRRKRKWKDFFEKLMKEVIQKQEEQQKKFLEAVEKREHERMVREEAWRAQEMAKINREREILSQERSMAAAKDAALMSFLQKISEQQIQNPGQILNFSLPPLQPPPPAPPPQSAAPPPRSLQSPATPSGPPGPLAVKRASTELIEATPKTDNGDNYEAATSSRWPKVEVEALISLRTNLDSKYQESGPKGPLWEEISAAMRKLGYNRNAKRCKEKWENINKYFKKVKESHKKRSEDSKTCPYFHQLDALYREKNKFESSSSNLFRPDSSIVPLMVRPEQQWPPQPQPDSGNDDVESEPIDQRQENDDKEGEDEEEDDESGGNYEIVATKPASVGATG 598
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1497717 1500195 - Bpe025064 Bpe02g00215 98364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00215 598 SMART sant 56 118 IPR001005 -
Bpe02g00215 598 SMART sant 421 483 IPR001005 -
Bpe02g00215 598 CDD GT1 423 488 - -
Bpe02g00215 598 MobiDBLite consensus disorder prediction 406 420 - -
Bpe02g00215 598 MobiDBLite consensus disorder prediction 355 421 - -
Bpe02g00215 598 MobiDBLite consensus disorder prediction 202 230 - -
Bpe02g00215 598 MobiDBLite consensus disorder prediction 567 582 - -
Bpe02g00215 598 Coils Coil 280 300 - -
Bpe02g00215 598 MobiDBLite consensus disorder prediction 359 392 - -
Bpe02g00215 598 CDD GT1 58 123 - -
Bpe02g00215 598 MobiDBLite consensus disorder prediction 43 57 - -
Bpe02g00215 598 Gene3D - 425 486 - -
Bpe02g00215 598 Gene3D - 60 121 - -
Bpe02g00215 598 MobiDBLite consensus disorder prediction 517 598 - -
Bpe02g00215 598 PANTHER - 28 590 - -
Bpe02g00215 598 MobiDBLite consensus disorder prediction 148 168 - -
Bpe02g00215 598 MobiDBLite consensus disorder prediction 1 59 - -
Bpe02g00215 598 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 28 590 - -
Bpe02g00215 598 ProSiteProfiles Myb-like domain profile. 417 481 IPR001005 -
Bpe02g00215 598 MobiDBLite consensus disorder prediction 245 264 - -
Bpe02g00215 598 Pfam Myb/SANT-like DNA-binding domain 423 510 IPR044822 -
Bpe02g00215 598 Pfam Myb/SANT-like DNA-binding domain 58 144 IPR044822 -
Bpe02g00215 598 ProSiteProfiles Myb-like domain profile. 58 116 IPR001005 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00215 Bpe04g00350 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00215 Bpe-Chr2:1497717 Bpe04g00350 Bpe-Chr4:2226258 0 dispersed
Bpe12g00493 Bpe-Chr12:10731625 Bpe02g00215 Bpe-Chr2:1497717 1.58E-06 dispersed
Bpe02g00214 Bpe-Chr2:1489665 Bpe02g00215 Bpe-Chr2:1497717 1.11E-141 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20853 PF13837 Myb_DNA-bind_4 9.00E-22 CL0123 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00215 - - jre:109011419 620.157