Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00224 TCTGATGTTGGAGTGGGATTTCAAATTTTCAGGATTTTCAATGCTGACGATCAAAGGCCCGAACTTCCCTGGAAGAAAAATGACCACGTTGAAAATCCATTTCCACCATACAAGGAGAAGAAAACATCATTCTTGAAGTCGGAAGTTATTACTACTCGAAACGGCAGCGAAAAACCATGGCCGAAGCGAATCCTCGATCCAGGCGGTGATGTAATCCTGCAATGGAACAGGATTTTCCTGTTTTCTTGCCTAGTAGCACTATTTATCGATCCATTGTTCTTTTATCTCCCATCTGTTGTGAAGTCTGCCAGTTCATCTTGTATGACGGCTGATTCCCATTTGGAAATTACTTTGACATTTTTCCGGACCCTCGGAGATGTTTTCTACTTGTTGCATATTGTTTTTAAGTTTCGAACCTCCTATGTATCCCCGAGTTCGCGAGTTTTTGGCCGGGGCGAACTTGTGATGGATCCAAAAAAGATTGCTGGACGCTACTTGAGATCAGACTTCTTCATAGATCTGATAGCAACTCTACCCCTTCCTCAGATTGTAATTTGGTTTGTTATGCGGGAAGCTGATCATACAGACAATACCCTTGTACTGATTGTTTTGCTCCAATATGTTCCTAAATTGTATTTGATTTTCCCGTTAAGCGATCAAATTATCAAAGCCACCGGTGTCGTCACAAAGACTGCTTGGGCCGGGGCAGCTTATAATCTCCTGCTATACATGTTAGCTAGTCATGTTCTAGGCGCATCATGGTATTTATTGTCGGTAGAGCGGCACGCCTCTTGCTTGAAATCCGTATGCAGAAAGGAAATGGGTTCTAATTCAATGTGCTCTCTTGATTACCTGCTGTGTAGTAGTTTGAATCTGGACAGTAGAAGGAGGTGGGAAGCAAATACTACTGTATTTAGCTACTGTAATCCAACTGAGGCTACAAGTTTCAACTATGGATTATTTGCAGATGCAATTGCAAAGAATGTCATCTACTCGAGTTTTTTCGAGAAGTATTTTTTCTGTCTTTGGTGGGGCCTGCAGAACTTGAGTTCTTATGGCCAGGGCCTGACTGCTAGTACATTTGTTGGAGAGACTGTTTTTGCTAGCTTCATTGCCATTGTGGGTCTGGTTTTGTTTGCCCATTTGATTGGAAATATGCAGACTTATTTGCAATCTATCTCGGTAAGGCTGGAGGAGTGGAGGCTCAAGCGAAGGGACACTGAGGAGTGGATGCAGCACCGCCAACTCCCTCAAGATCTACAAGAGCGTGTTCATCGGTTTGTACTGTATAAATGGGTTGCAACCCGAGGTGTTGATGAAGAGTCAATCCTACGAGCCCTTCCTATGGACCTTCGTCGAGATATTCAACGCCACCTTTGCCTAGACTTGGTTCGACGTGTCCCTTTTTTTGCACAAATGGACGATCAATTACTTGATGCAATATGCGAACGGTTGGTGTCGTCTTTGAGTACACAAGGCACTTACATCGTCCGTGAAGGTGACCCGGTGACCGAGATGCTCTTCATCATTCGAGGGAGGCTCGAGAGTTGTACAACGAACGGTGGCCGAAGTGGTTTCTTCAATTCAATAACATTAAGACCAGGCGATTTCTGTGGGGAAGAACTACTTTCGTGGGCATTGCTTCCAACATCTTCAGTGAGCTTGCCTTCTTCGACCCGAACTGTTAAAACTCTCGTTGAAGTCGAAGCCTTCGCTCTCCATGCCGAAGATCTCAAATTCGTCGCTAATCAGTTTAAACGCCTCCATAGCAAGAAGCTTCAACACACGTTCCGATTCTACTCGCACCATTGGAGAACTTGGGCCTCCTGTTATATTCAATCTGCATGGCGTCGACACCAAAAGCGGAAGATGGCGAAAACGCTTAGCGCTAAGGAATCATTCTACTTCACTCTCGAGAAGCCATCGGGGGAAGGAACTGAACAAGAAGAGGCCGAGCCTTATTCTATGCATTCGAACAACTCGAAAGTGAAACAGAACCTCGGAGTCACGATGCTGGCTTCAAGGTTTGCAGCTAACACACGCAGAGGAGCGCAGAAAGTCATGGATGGCGAATCGAAAAAGTTGCAGAAGCCGGACGAACCAGACTTCACGGCTGTGCCAGACGACTGA 2130 45.35 SDVGVGFQIFRIFNADDQRPELPWKKNDHVENPFPPYKEKKTSFLKSEVITTRNGSEKPWPKRILDPGGDVILQWNRIFLFSCLVALFIDPLFFYLPSVVKSASSSCMTADSHLEITLTFFRTLGDVFYLLHIVFKFRTSYVSPSSRVFGRGELVMDPKKIAGRYLRSDFFIDLIATLPLPQIVIWFVMREADHTDNTLVLIVLLQYVPKLYLIFPLSDQIIKATGVVTKTAWAGAAYNLLLYMLASHVLGASWYLLSVERHASCLKSVCRKEMGSNSMCSLDYLLCSSLNLDSRRRWEANTTVFSYCNPTEATSFNYGLFADAIAKNVIYSSFFEKYFFCLWWGLQNLSSYGQGLTASTFVGETVFASFIAIVGLVLFAHLIGNMQTYLQSISVRLEEWRLKRRDTEEWMQHRQLPQDLQERVHRFVLYKWVATRGVDEESILRALPMDLRRDIQRHLCLDLVRRVPFFAQMDDQLLDAICERLVSSLSTQGTYIVREGDPVTEMLFIIRGRLESCTTNGGRSGFFNSITLRPGDFCGEELLSWALLPTSSVSLPSSTRTVKTLVEVEAFALHAEDLKFVANQFKRLHSKKLQHTFRFYSHHWRTWASCYIQSAWRRHQKRKMAKTLSAKESFYFTLEKPSGEGTEQEEAEPYSMHSNNSKVKQNLGVTMLASRFAANTRRGAQKVMDGESKKLQKPDEPDFTAVPDD 709
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1549514 1553085 + Bpe008071.1 Bpe02g00224 98373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00224 709 Gene3D Jelly Rolls 467 587 IPR014710 -
Bpe02g00224 709 SUPERFAMILY cAMP-binding domain-like 399 591 IPR018490 -
Bpe02g00224 709 Gene3D Helix hairpin bin 396 460 - -
Bpe02g00224 709 SUPERFAMILY Voltage-gated potassium channels 67 391 - -
Bpe02g00224 709 MobiDBLite consensus disorder prediction 686 709 - -
Bpe02g00224 709 PRINTS EAG/ELK/ERG potassium channel family signature 364 375 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe02g00224 709 PRINTS EAG/ELK/ERG potassium channel family signature 432 439 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe02g00224 709 PRINTS EAG/ELK/ERG potassium channel family signature 133 142 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe02g00224 709 PRINTS EAG/ELK/ERG potassium channel family signature 245 255 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe02g00224 709 PRINTS EAG/ELK/ERG potassium channel family signature 382 391 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe02g00224 709 MobiDBLite consensus disorder prediction 680 709 - -
Bpe02g00224 709 MobiDBLite consensus disorder prediction 641 660 - -
Bpe02g00224 709 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 39 706 - -
Bpe02g00224 709 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED 39 706 - -
Bpe02g00224 709 SMART cnmp_10 469 600 IPR000595 -
Bpe02g00224 709 ProSiteProfiles cAMP/cGMP binding motif profile. 469 543 IPR000595 -
Bpe02g00224 709 CDD CAP_ED 469 600 IPR000595 -
Bpe02g00224 709 Pfam Ion transport protein 75 396 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bpe02g00224 709 Pfam Cyclic nucleotide-binding domain 492 579 IPR000595 -
Bpe02g00224 709 Gene3D - 85 395 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00671 Bpe-Chr1:4729042 Bpe02g00224 Bpe-Chr2:1549514 0 dispersed
Bpe02g00224 Bpe-Chr2:1549514 Bpe09g00487 Bpe-Chr9:13357648 0 dispersed
Bpe02g00224 Bpe-Chr2:1549514 Bpe12g00381 Bpe-Chr12:9134036 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00224 K05391 - vvi:100267557 1033.09