Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00231 ATGGGGTGTGTGCAATCCAGAATAGACAATGAAGAATCAGTGTCTCGCTGCAAGGACCGCCGGAACTTAATGAAAGATGCAGTTCTCGCTCGAAATGCTTTCGCCGCCGGCCATTCTGGATTTGCTGTCGCCTTGAAAAACACAGGCGCTGCTTTGAGTGACTATGGAGAAACCGAAGAGAATCACCCTCTCCACCCTCCGCCTTCGTTAGATCCTGCTTCTGAACCACTACTTCCCCCGCCTCCGCTTCCACCCATGGACAGCCTCCCTCCTCCGCCACCGCCACTCCCTATCTTCTCTCCGAGCCCTCTCAAGCGTGCCACTAGTCTTCCTGCCATCCCAACGAAGCTTCGAAAGTCCAGTGGTCTAAAGGGTTCCATCTCCATTGCCGAGGAAGATGAAGAGGAAGAGCTGCCCGAAATGGATGAAAGAACTGGGAAGGATAACTCCCAAAGGGGGAGGTTACATAGGCAAAATGGCGTGGCGGATTCGGAAGAGGTGCCCAGGACTCCGATGCCGGAGTCGAAGGGCATGGCTTGGGATTACTTTTTTGTTGTAGATAGTATGGCGGGTCCTTCTGTGGACGACACCGGGGATGAAAATGGTGAGAATGAGAGAATGGAGTTCAGTGAAGCCGAGAACTCAAGTATCGGTGCCGGAGATTTCGATACTGGAGTTGATGGATTCGAGCCAAAAACACCAGAAAAAGTTGTTGAGAAAGCAGAAGAGATCGTCGTTAAGAAGGCGAAGCAGATGGAGCACGCGAATACTGCGCCTCCAGAGTTGAAGAGAGCGGTGAATGCGGCCATCCCTACCGTAAGCTTGATTCAGATTCTGACCACCATAGATGATCATTTTCTGAAGGCTTCAGAGAGTGCCCAGGAGGTTTCGAAGATGATGGAGGCCACTCGATTGCACTATCACTCTAATTTTGCTGATAATCGAGGACACATTGATCATTCGGCAAGGGTTATGCGTGTAATTACTTGGAACAGATCGTTCAGAGGTATGCCTAATGCCGATGTTGGGAAGGATGATTTCGATTCAGAAGAATATGAAACCCTTGCCACTGTTTTGGATAAATTGCTGGCCTGGGAGAAGAAACTTTACGACGAAGTGAAGCAAGGTGAACTTATGAAGTTGGAGTACCAGAGGAAGGTTGCTTTGCTTAATAAGCAGAAAAAGCGGAATGTTAGTTCTGAATCTTTAGAGAAAACAAAGGCTGCCGTGAGTCATTTACATACTAGATACATAGTCGATATGCAGTCTATGGATTCAACAGTTTCAGAAGTTACTCGAATTCGAGAGGAGCAATTGTACCCAAAACTTGTTGCTCTCGTTGAGGGATTGGCTAAAATGTGGGGAAGCATGTGCATGCACCACAACAGCCAGTTGAAAAGTGTTCTCGACCTCAAATCTCTTGACATTTCTCACGCACCTAAGGACATTTCTCACACACCTAAGGAAACAAGCAAGCATCACCATGAGAGAACTATCCAACTCTGGAATGCCGTCCAAGACTGGCATTCGCAATTCGAAAAGCTTGTTACTCATCAGAAACATTACATCCAAGCACTGAATAGTTGGCTGAAATTGAATCTCATCCCCATCGAAAGCAGCTTGAAAGAAAAAATCTCGTCCCCGCCGAGAGTTCAGAGCCCTCCAATCCAAACTCTCCTCCATTCGTGGAATGATTGTCTAGAAAAGCATCCTGACGAGCTTGGCAAATCTGCAATATCATCCTTTGCGGCTGTGATAAAGACCATAATTATTCATCAGGAAGAAGAAATGAAGCTGAAGGACAAGTGTGAGGAAACAAGAAAAGAATATCTGCGGAAGAAACAGATATTCGAGGATTGGCATCAGAAGTACATGCAGCGAAGAATGCACGACGAAACAGATACAGAGAGAGGGGATGATTCAAATGCAAAAGACCCGGTTTCTGAAAAGCAATTCGTAGTTGAGAGTTTGAGGAAGAGACTGGAGGAGGAAATTGAAGCTCATGAGAGACATGGCATTCAGGTGAGGGACAAGTCACTGGGTAGTCTGAAAACTCGATTGCCTGAGCTTTTCCGAGCCATGTTGGACTATGCCCACGCCTGTGCCGACACTTATGGTAGATTGAGGGCCATCGCAATGTCACAGAAATCAAACTAA 2157 47.06 MGCVQSRIDNEESVSRCKDRRNLMKDAVLARNAFAAGHSGFAVALKNTGAALSDYGETEENHPLHPPPSLDPASEPLLPPPPLPPMDSLPPPPPPLPIFSPSPLKRATSLPAIPTKLRKSSGLKGSISIAEEDEEEELPEMDERTGKDNSQRGRLHRQNGVADSEEVPRTPMPESKGMAWDYFFVVDSMAGPSVDDTGDENGENERMEFSEAENSSIGAGDFDTGVDGFEPKTPEKVVEKAEEIVVKKAKQMEHANTAPPELKRAVNAAIPTVSLIQILTTIDDHFLKASESAQEVSKMMEATRLHYHSNFADNRGHIDHSARVMRVITWNRSFRGMPNADVGKDDFDSEEYETLATVLDKLLAWEKKLYDEVKQGELMKLEYQRKVALLNKQKKRNVSSESLEKTKAAVSHLHTRYIVDMQSMDSTVSEVTRIREEQLYPKLVALVEGLAKMWGSMCMHHNSQLKSVLDLKSLDISHAPKDISHTPKETSKHHHERTIQLWNAVQDWHSQFEKLVTHQKHYIQALNSWLKLNLIPIESSLKEKISSPPRVQSPPIQTLLHSWNDCLEKHPDELGKSAISSFAAVIKTIIIHQEEEMKLKDKCEETRKEYLRKKQIFEDWHQKYMQRRMHDETDTERGDDSNAKDPVSEKQFVVESLRKRLEEEIEAHERHGIQVRDKSLGSLKTRLPELFRAMLDYAHACADTYGRLRAIAMSQKSN 718
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1581852 1585105 - Bpe008075.1 Bpe02g00231 98380

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00231 718 MobiDBLite consensus disorder prediction 209 231 - -
Bpe02g00231 718 MobiDBLite consensus disorder prediction 628 648 - -
Bpe02g00231 718 MobiDBLite consensus disorder prediction 142 163 - -
Bpe02g00231 718 MobiDBLite consensus disorder prediction 65 101 - -
Bpe02g00231 718 PANTHER DNA LIGASE (DUF630 AND DUF632) 1 716 - -
Bpe02g00231 718 PANTHER UNCHARACTERIZED 1 716 - -
Bpe02g00231 718 MobiDBLite consensus disorder prediction 56 174 - -
Bpe02g00231 718 Pfam Protein of unknown function (DUF632) 275 587 IPR006867 -
Bpe02g00231 718 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Bpe02g00231 718 Coils Coil 658 678 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00231 - - - zju:107420703 918.302
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe02g00231 Bpe04g00008 CCT
Bpe02g00231 Bpe04g00008 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00231 Bpe-Chr2:1581852 Bpe03g00629 Bpe-Chr3:26539691 0 dispersed
Bpe02g00231 Bpe-Chr2:1581852 Bpe10g00641 Bpe-Chr10:13129998 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g362 Blo01g01712 . . . . Bpe02g00231 . Bma01g02491 . . . . . . . . . . . . . . . . . . . . . . . . Cone7ag1410 Cone17ag1105 . . . . . . . . . . Bpe04g00008 . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000636 2 3 3 3 3 3 6 3 3 3 3 3 6 3 4 6 3 4 4 3 3 2 3 3 3 3 4 4 3 3 102
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe02g00231 Bpe_Chr02 FPKM 0.0 1.134042 11.058148 13.535443 44.56765 38.346512 46.543606 1.20962 1.410249 0.551925