Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00270 ATGGAGGAATATGGTGGTAATGGCGGTGGACGTTCTCCTCCCACTTACAAAGGAGTCAGGAAGAGAAAATGGGGCAAATGGGTATCCGAAATTCGAGAGCCTGGAAAGAAGACCCGAATATGGCTCGGGAGTTATGAGGCGCCGGAAATGGCCGCCGCAGCCTACGACGTGGCGGCTTTACACCTAAAAGGATCAGGGACTCACCTCAATTTCCCTGAGTTGGCGGAGAGCCTACCTCGCCCGGCGAGTTCCAGGCCTGAAGATATTCAACTTGCAGCTCAGGAAGCAGCATTGCGGTTCAGAAAACCGGCGAGCATTTCCACGTTGTCGCCAATGGATGAGTCGGGCGGAGAGAGAAACGTTCCGGCTGTGAGAGTGGGTCTGTCGGCAAGCCAAATTCAGGCGATCAACGACTGGCCGTTGCATTCTCCGACTATGTGGATGCAAATGTGTGAAAACGAGTGTAGTAATACCAAACTGTGGAATACGGAGTGGGAAGAAGAGACGAGGCAGAATCAATACGATCAGCCTCAGTCAATATGGGATTATTAA 552 51.99 MEEYGGNGGGRSPPTYKGVRKRKWGKWVSEIREPGKKTRIWLGSYEAPEMAAAAYDVAALHLKGSGTHLNFPELAESLPRPASSRPEDIQLAAQEAALRFRKPASISTLSPMDESGGERNVPAVRVGLSASQIQAINDWPLHSPTMWMQMCENECSNTKLWNTEWEEETRQNQYDQPQSIWDY 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1826101 1826652 - Bpe008114.1 Bpe02g00270 98419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00270 183 PRINTS Ethylene responsive element binding protein signature 38 54 IPR001471 GO:0003700|GO:0006355
Bpe02g00270 183 PRINTS Ethylene responsive element binding protein signature 16 27 IPR001471 GO:0003700|GO:0006355
Bpe02g00270 183 Gene3D AP2/ERF domain 15 73 IPR036955 GO:0003700|GO:0006355
Bpe02g00270 183 ProSiteProfiles AP2/ERF domain profile. 15 72 IPR001471 GO:0003700|GO:0006355
Bpe02g00270 183 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 15 181 - -
Bpe02g00270 183 MobiDBLite consensus disorder prediction 1 21 - -
Bpe02g00270 183 Pfam AP2 domain 14 64 IPR001471 GO:0003700|GO:0006355
Bpe02g00270 183 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF022 15 181 - -
Bpe02g00270 183 CDD AP2 16 74 IPR001471 GO:0003700|GO:0006355
Bpe02g00270 183 SMART rav1_2 15 78 IPR001471 GO:0003700|GO:0006355
Bpe02g00270 183 SUPERFAMILY DNA-binding domain 15 73 IPR016177 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00270 Bpe-Chr2:1826101 Bpe08g00494 Bpe-Chr8:3241344 8.12E-37 dispersed
Bpe02g00270 Bpe-Chr2:1826101 Bpe04g00311 Bpe-Chr4:1991813 2.66E-92 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20855 PF00847 AP2 7.90E-13 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00270 - - twl:120007866 195.667