Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00274 TCGGCCATGGCGGAGCTGAGGATGGTTTGGTTGTCTGTTCTGTTGATGGTGTCTCTGGGTGCAGTTTCTGGGCAGAATGGAGATCCGTTTCCGCAAGGTGGAGGGAGGAGAGAGATGGTTCCTGCTATGTTTATATTCGGAGACTCGCTCATTGACAATGGAAATAACAATAACCTTCCTTCCTTTGCAAAAGCTAACTACTTTCCTTATGGCATCGACTTCAATGGCGGACCCACTGGTCGTTTTTCCAATGGCTACACCATCGTTGATGAAATAGCTGAGCTGTTGGGACTTCCATTAATTCCTCCATTTTCTGAAGCTTCTGGGAACCAAGTTCTTCACGGTGTCAACTACGCTTCTGCTGCAGCTGGAATTCTCGACGAGACCGGGAGAAACTTTGTGAGTCGGATTCCGTTCAATCAGCAAATAAGCAACTTTCAGAACACCCTCGACCAGATTACCAACAGTCTTGGAGGTCCAGATAATATCGCAAGAGCTATCGGACGGAGCATATTCTTTGTCGGAATGGGTAGTAATGACTACTTAAACAACTACCTGATGCCTAATTACAACACGAAAAACCAGTATAATGGTCCACAGTTCGCCAATCTTTTGGTTCAGCAGTACTCCCAGCAGCTAAGTAGACTCTATAATCTTGGAGCAAGGAAATTTGTTGTAGCTGGTGCGGGGCAGATGGGTTGCATTCCGAGCATATTAGCTCAGAGCCCAGTTGGAAGCTGCTCGGAAGAAGTAAACCAGCTCATTCTAACTTTCAATTCTAATGTCAAGGCAATGGTCAACAATCTCAACGCCAATCTCCCCGGCTCTCGATTTACTTACGTTGACATTGCTCGAATGTTCCAAGATATCCTCACCAACTCCCGATCTTACGGTACGTTTAATTATTCAGCTCTCTTATTCTACATCGGAGTACTCAGAAGTCGGAATATCGAATGTACACGTGCAGGATTCAGCGTGATAAACAGAGGATGCTGTGGAATTGGAAGGAACAGAGGGCAAATAACTTGTCTGCCATTTCAGACGCCATGTCCAAACAGAGATCAATACGTCTTTTGGGACGCGTTTCATCCGACAGAAGCTGTCAACATTATAATGGGGAGGAAGGCTTTTAATGGAGACACTAGCGTGATTTATCCTATCAACATAGAGCAGCTTTCCAATCTTTGA 1188 45.29 SAMAELRMVWLSVLLMVSLGAVSGQNGDPFPQGGGRREMVPAMFIFGDSLIDNGNNNNLPSFAKANYFPYGIDFNGGPTGRFSNGYTIVDEIAELLGLPLIPPFSEASGNQVLHGVNYASAAAGILDETGRNFVSRIPFNQQISNFQNTLDQITNSLGGPDNIARAIGRSIFFVGMGSNDYLNNYLMPNYNTKNQYNGPQFANLLVQQYSQQLSRLYNLGARKFVVAGAGQMGCIPSILAQSPVGSCSEEVNQLILTFNSNVKAMVNNLNANLPGSRFTYVDIARMFQDILTNSRSYGTFNYSALLFYIGVLRSRNIECTRAGFSVINRGCCGIGRNRGQITCLPFQTPCPNRDQYVFWDAFHPTEAVNIIMGRKAFNGDTSVIYPINIEQLSNL 395
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1842290 1843798 + Bpe008118.1 Bpe02g00274 98423

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00274 395 Gene3D SGNH hydrolase 36 380 IPR036514 -
Bpe02g00274 395 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 6 395 - -
Bpe02g00274 395 SUPERFAMILY SGNH hydrolase 163 375 - -
Bpe02g00274 395 CDD SGNH_plant_lipase_like 41 380 IPR035669 -
Bpe02g00274 395 Pfam GDSL-like Lipase/Acylhydrolase 44 374 IPR001087 GO:0016788
Bpe02g00274 395 PANTHER OS05G0419800 PROTEIN 6 395 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00274 - - - rcu:8263240 585.104
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe02g00274 Bpe04g00304 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00274 Bpe-Chr2:1842290 Bpe14g00306 Bpe-Chr14:3056965 3.75E-180 dispersed
Bpe05g00701 Bpe-Chr5:20604374 Bpe02g00274 Bpe-Chr2:1842290 8.27E-72 dispersed
Bpe07g00872 Bpe-Chr7:14792941 Bpe02g00274 Bpe-Chr2:1842290 1.60E-58 dispersed
Bpe12g00683 Bpe-Chr12:12429653 Bpe02g00274 Bpe-Chr2:1842290 1.05E-31 dispersed
Bpe01g00348 Bpe-Chr1:2193488 Bpe02g00274 Bpe-Chr2:1842290 4.65E-47 transposed
Bpe02g00252 Bpe-Chr2:1716456 Bpe02g00274 Bpe-Chr2:1842290 4.17E-120 transposed
Bpe10g00903 Bpe-Chr10:14696423 Bpe02g00274 Bpe-Chr2:1842290 5.04E-44 transposed
Bpe02g00274 Bpe-Chr2:1842290 Bpe04g00304 Bpe-Chr4:1954608 1.31E-83 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1660 Blo01g01668 Blo12g00832 . . Bpe02g00274 Bpe04g00304 . . . . Cma01g00840 . . . . . . Bhi04g02590 . . . . . . . . . . . . . . . . . . . . Cme09g00036 . . Bda11g00935 . . . . . . Cmo01g00880 Cmo09g01300 . . . Car09g01143 . . . . . . . . . . . . . . . . Lsi08g00047 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002428 2 2 3 2 3 2 2 1 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1 2 3 2 3 61
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe02g00274 Bpe_Chr02 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0