Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00276 ATGAGTCTCGTTGCTGGTCGTGCTCTCTCTCCAGGGCACCCCTACGCTTCGATTCTCAGGCAGAATGACCGTTCTTATGCTACTAGGACGACCGATGGAGCTAGACCAAGGCTGCGAAGACCGCTGCTACACTCGCCTCGCGCCGCTCTCGTGAGTGCTAGACCAAGTGCCTTGCCTGTGCTGAGAGATGGTGGCAATGGATCCCTTCCCACCCAACTGGTCTTGGGAGTTGACCGAACCGATGATCTGCAGGCCGAGGCTAGGGCCATGTCTCGTGCCGCCGGCGCCCCCATCTTCAGTCCAGAAATTCTTGCCGCCAAGTACGGTTCCAACCCCGCCAAGGCGTTGCGGAGGACTCTTCAAATTTTCATTGCACTGATTTCATTTGGCCTTAAACTTTGGTTGGACCAACGAAACGGCGTTCTTGATCGAAATAAAAGGCGGCGAGCTGTCGAGCTGAGAGGAGTTTTAACTCGATTAGGTCCTACATTTGTCAAACTAGGTCAGGCCTTATCGACTAGGCCAGACATTTGCCCTCCAGAGTACCTTGATGAGCTCTCTGAACTTCAAGACGCTTTGCCTACCTTTCCTGATGTGGATGCATTCTTGTGCATAGAGAAGGAACTGGGTGCATCGCTTGTGTCAATTTTCTCATCTATATCTCCATCTCCTATTGCAGCGGCTAGTTTGGGTCAAGTTTACAAAGCTCAACTAAAGTCTTCCGGTCAGATTGTTGCTGTTAAGGTGCAGCGCCCTGGTATTGAAGAAGCTATTGGACTGGACTTTTACCTGATACGTGGTTTAGGTTTTCTCATTAATAAGTATGTTAACTTCATCACTAGTGATGTTGTTGCCCTTATTGATGAATTTGCCCGTAGAGTTTATCAAGAGCTCAACTATGTACAGGAGGGGCAGAATGCACGAAAGTTCAAAAAATTGTATGCTGACAAAGAAGATGTTGTTGTACCAGATATATTTTGGGATTATACAAGTGGCAAAGTGCTGACGATGGAGTGGGTTGATGGAGTCAAATTAAATCAGCAAGATGCTATTGAGAGACAAGGCTTAAAGGTTTTAGATCTGGTAAACACGGGTATACAGTGTAGCCTCAGGCAGCTTCTTGAGTATGGATTTTTTCATGCAGATCCTCATCCCGGCAATCTCTTGGCAACACCGGAAGGAAAGCTTGCATTTCTTGATTTTGGAATGATGAGCGAAACTCCAGAAGAAGCAAGGTTTGCAATTATTAGTCATGTTGTTCACATGGTTAATCGGGATTATGTAGCTATGGCACGTGACTATTACACCCTAGATTTTTTATCATCAGATGTAGATGTTACTCCAATAGTGCCAGCTCTTAAAAACTTCTTTGACGATACACTAAATTCAACTGTGAGTGAATTGAACTTCAGAACAGTAGTTGATGGTCTTGGAGCTGTATTTTATCAATATCCATTTCATGTCCCAGCGTATTATGCACTGATATTGAGGTCGCTTACCGTGCTTGAAGGTTTAGCACTTTATGCAGATCCTAATTTCAAGGTGCTTGCGGCATCTTATCCTTATTTTGCGAAAAGGCTGCTGACAGATCCAAATCCATATCTGAGAGATGCTCTCGTTGACTTACTTTTCAAAGATGGAAAATGGAATAGACTTGAAAATTTATTGGTTCAAGGAAAAAAAGATAGAGATTTTTCTGCAAAGGATGCTCTGCAGCCTGTCCTGAAGTTATTATTGGGTCCAGATGGTGAAGCACTTCGAACATTAGTGACTAAAGAAGCTGTTCGGGTGACCGAAGCTTTTGTTCTAGGTGCTCTATTGGATTCATACAATTTTGTACCAGATTTTATGAGGACGCTTGTCTTTAGCTTCAATTTTCCTGGACCTCTTGTCATAAATAGTTCAGAGCGGGAAAGCCTGATAGAGCTTCGAGATCAGGTTCTCAGGATATGGAATCTTCTTCAATCCTCTGATAATTTTGATCCTGCCCTTTTCCAGCCAATTTTGCAGGTTCTTCAACTGCCAGAGGCTCGCAATTTAGGAAGCCGTGTGCTTGGTGGGATCACTCAACGCCTTGCTGCGCGGATGTTGCAACAAGTACTTCGTCCACCTGCATCAACTGTATGA 2127 44.71 MSLVAGRALSPGHPYASILRQNDRSYATRTTDGARPRLRRPLLHSPRAALVSARPSALPVLRDGGNGSLPTQLVLGVDRTDDLQAEARAMSRAAGAPIFSPEILAAKYGSNPAKALRRTLQIFIALISFGLKLWLDQRNGVLDRNKRRRAVELRGVLTRLGPTFVKLGQALSTRPDICPPEYLDELSELQDALPTFPDVDAFLCIEKELGASLVSIFSSISPSPIAAASLGQVYKAQLKSSGQIVAVKVQRPGIEEAIGLDFYLIRGLGFLINKYVNFITSDVVALIDEFARRVYQELNYVQEGQNARKFKKLYADKEDVVVPDIFWDYTSGKVLTMEWVDGVKLNQQDAIERQGLKVLDLVNTGIQCSLRQLLEYGFFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIISHVVHMVNRDYVAMARDYYTLDFLSSDVDVTPIVPALKNFFDDTLNSTVSELNFRTVVDGLGAVFYQYPFHVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALVDLLFKDGKWNRLENLLVQGKKDRDFSAKDALQPVLKLLLGPDGEALRTLVTKEAVRVTEAFVLGALLDSYNFVPDFMRTLVFSFNFPGPLVINSSERESLIELRDQVLRIWNLLQSSDNFDPALFQPILQVLQLPEARNLGSRVLGGITQRLAARMLQQVLRPPASTV 708
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1848346 1853173 + Bpe008120.1 Bpe02g00276 98425

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00276 708 ProSiteProfiles Protein kinase domain profile. 219 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g00276 708 CDD ABC1_ADCK3-like 189 432 - -
Bpe02g00276 708 SUPERFAMILY Protein kinase-like (PK-like) 190 405 IPR011009 -
Bpe02g00276 708 Pfam ABC1 atypical kinase-like domain 188 432 IPR004147 -
Bpe02g00276 708 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 26 706 - -
Bpe02g00276 708 MobiDBLite consensus disorder prediction 20 39 - -
Bpe02g00276 708 Gene3D Transferase(Phosphotransferase) domain 1 218 429 - -
Bpe02g00276 708 PANTHER CADMIUM-TRANSPORTING ATPASE-RELATED 26 706 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00276 K08869 ADCK, ABC1; aarF domain-containing kinase - cit:102629736 1051.97
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00276 Bpe-Chr2:1848346 Bpe02g00599 Bpe-Chr2:3886130 6.28E-116 dispersed
Bpe02g01201 Bpe-Chr2:15721160 Bpe02g00276 Bpe-Chr2:1848346 1.56E-30 transposed
Bpe02g01271 Bpe-Chr2:16121001 Bpe02g00276 Bpe-Chr2:1848346 6.84E-104 transposed
Bpe04g01062 Bpe-Chr4:7978690 Bpe02g00276 Bpe-Chr2:1848346 1.37E-119 transposed
Bpe04g01742 Bpe-Chr4:23142214 Bpe02g00276 Bpe-Chr2:1848346 1.85E-26 transposed
Bpe04g01878 Bpe-Chr4:23869778 Bpe02g00276 Bpe-Chr2:1848346 4.48E-59 transposed
Bpe06g00463 Bpe-Chr6:15963939 Bpe02g00276 Bpe-Chr2:1848346 5.49E-17 transposed
Bpe14g00064 Bpe-Chr14:1015450 Bpe02g00276 Bpe-Chr2:1848346 1.98E-29 transposed
Bpe14g00424 Bpe-Chr14:3907013 Bpe02g00276 Bpe-Chr2:1848346 2.40E-123 transposed
Bpe02g00276 Bpe-Chr2:1848346 Bpe04g00303 Bpe-Chr4:1948290 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g230 . . . . . Bpe02g00276 . . . . Cma01g01591 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo18g00003 . . . . . . . Cmo01g01639 . Cma09g00545 . . . . Cpe02g00386 . . . . . . . . . . . . . . . Csa02g02327 . Cme04g00310
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007525 2 1 2 2 2 1 1 1 0 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 2 2 1 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe02g00276 Bpe_Chr02 FPKM 3.274249 4.877469 6.903224 6.284008 27.258381 24.455379 27.085445 6.407819 6.340088 7.513594