Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00277 ATGGTGAAGGACACCGACTACTACGACGTTCTTGGAGTCAGCCCCGCCGCCTCCGAGGCCGAGATCAAGAAAGCATATTATTTGAAGGCAAGACAGGTCCATCCAGATAAAAATCCAAACGACCCTCTAGCAGCACGAAATTTTCAGGTGTTGGGAGAGGCTTACCAGGTATTAAGTAATGCAGGACAACGACAATCATATGATGCTTATGGAAAATCTGGTATCTCGACGGATGCAATTATTGACCCAGCAGCCATCTTTGCCATGCTTTTTGGTAGTGAGCTTTTTGAAGAATATATTGGGCAACTTGCAATGGCATCAATAGCTTCACAAGACATTTTTACGGAAGGGGAACAGTTTGATGCCAAAAAGTTGCAGGAGAAAATGAGGATCGTTCAAAAAGAAAGAGAGGAAAAGCTTTCTCAAATACTTAAAGATCGACTACACCAATATGTGCAAGGTAGTAAAGAAGAATTTATCAATCATGCCGAAGCTGAAGTGGCAAGACTCTCCAATGCAGCCTACGGTGTGGACATGTTAAATACAATTGGCTACATATACGCCAGACAGGCAGCTAAGGAGCTGGGGAAGAAGGCAATATATTTGGGTGTGCCATTTGTTGCTGAGTGGTTCAGGAACAAAGGTCACTTTATAAAATCCCAAGTCACAGCTGCAACAGGGGCAATTGCTCTGATTCAGCTGCAGGAGGATATGAAAAAGCAACTTAGTGGAGAAGGAAACTACACTGAGGAAGAGCTTGAAATATATGTTCAATCTCATAAGAAATTAATGATCGATTCTCTTTGGAAGCTTAATGTTGCTGATATTGAGGCTACGCTCTCCCGTGTTTGTCAAATGGTACTCCAAGATAATAATGTCAAGAAGGAAGAGCTCCGTGCACGAGCAAAAGGGTTAAAGAATCTTGGTAAAATCTTTCAGAGGGTAAAATCCAACGTGAATGAGAACGAGGCTGTGGCAAATAGTTCTGTTCCAAAGCTGAATGGAAGTGAATCAAGAAACGATACGTGTTCTTCAATTTCATCTCGTAAATCTTCAGACAATGAAGAACCTTCTGACTATTCATATGCATCACGGAGTCCCTATGTAGATGCCCCCAACTTGCCAGGTGCACAAATAAATGAATACTTTCCCAGACCAACACCTCCACCAGGCGCACATAGGCATACAGATAAGAATTGA 1200 42.42 MVKDTDYYDVLGVSPAASEAEIKKAYYLKARQVHPDKNPNDPLAARNFQVLGEAYQVLSNAGQRQSYDAYGKSGISTDAIIDPAAIFAMLFGSELFEEYIGQLAMASIASQDIFTEGEQFDAKKLQEKMRIVQKEREEKLSQILKDRLHQYVQGSKEEFINHAEAEVARLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFVAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSGEGNYTEEELEIYVQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNVKKEELRARAKGLKNLGKIFQRVKSNVNENEAVANSSVPKLNGSESRNDTCSSISSRKSSDNEEPSDYSYASRSPYVDAPNLPGAQINEYFPRPTPPPGAHRHTDKN 399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1856804 1866075 + Bpe008121.1 Bpe02g00277 98426

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00277 399 MobiDBLite consensus disorder prediction 323 399 - -
Bpe02g00277 399 Gene3D DnaJ domain 1 83 IPR036869 -
Bpe02g00277 399 CDD DnaJ 6 60 IPR001623 -
Bpe02g00277 399 PRINTS DnaJ domain signature 8 26 IPR001623 -
Bpe02g00277 399 PRINTS DnaJ domain signature 63 82 IPR001623 -
Bpe02g00277 399 PRINTS DnaJ domain signature 26 41 IPR001623 -
Bpe02g00277 399 PRINTS DnaJ domain signature 43 63 IPR001623 -
Bpe02g00277 399 SMART dnaj_3 5 63 IPR001623 -
Bpe02g00277 399 Coils Coil 122 142 - -
Bpe02g00277 399 Pfam DnaJ domain 6 68 IPR001623 -
Bpe02g00277 399 PANTHER CHAPERONE PROTEIN DNAJ 10-LIKE ISOFORM X1 1 373 - -
Bpe02g00277 399 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 373 - -
Bpe02g00277 399 MobiDBLite consensus disorder prediction 323 361 - -
Bpe02g00277 399 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Bpe02g00277 399 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Bpe02g00277 399 Pfam X-domain of DnaJ-containing 133 324 IPR026894 -
Bpe02g00277 399 SUPERFAMILY Chaperone J-domain 2 101 IPR036869 -
Bpe02g00277 399 Coils Coil 288 308 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00277 - - - csv:101221160 653.284
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe02g00277 Bpe02g01770 CCT
Bpe02g01770 Bpe02g00277 ECH
Bpe02g00277 Bpe02g01770 ECH
Bpe02g00277 Bpe04g00302 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00277 Bpe-Chr2:1856804 Bpe05g00328 Bpe-Chr5:17086588 9.88E-125 dispersed
Bpe07g00710 Bpe-Chr7:13679500 Bpe02g00277 Bpe-Chr2:1856804 4.61E-11 dispersed
Bpe12g00259 Bpe-Chr12:2446896 Bpe02g00277 Bpe-Chr2:1856804 8.65E-11 dispersed
Bpe09g00295 Bpe-Chr9:2365818 Bpe02g00277 Bpe-Chr2:1856804 3.69E-07 transposed
Bpe02g00277 Bpe-Chr2:1856804 Bpe04g00302 Bpe-Chr4:1934256 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g3 Blo01g01664 . . Bda03g00342 Bpe02g00277 Bpe04g00302 Bma04g00311 Bma01g02435 . . . . . . . . . . . . . . . . . . . . . . . . . Cone17ag1483 . Lsi04g02441 Csa04g02758 . . . . . Bda01g01580 Bpe02g01770 . . . . . . . . . . . . . . . . . . . Cla11g01868 Cam11g1938 Cec11g1964 . Clacu11g2104 Cmu11g1905 Cre11g2313 . . Chy07g00444 .
Vvi18g1612 . . . . Bpe02g00277 . . . . . . . . . . . . Bhi04g02592 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002184 1 3 2 3 3 1 3 1 0 2 1 2 2 1 2 3 0 3 2 1 2 2 2 2 1 3 2 4 2 2 58
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe02g00277 Bpe_Chr02 FPKM 5.090625 4.41617 6.826396 6.611875 2.100896 2.674325 2.383084 3.7873 3.390316 4.682935