Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00285 ATGAGTCTGCACAAGCATGGCCACCTTCTTGCAGCTTTATCGTTCTTGATTGCAGTGCAGATGGCTGCAGTAATGGCGGACGACGTCATATCGGGATGCCCGTCGAAATGCGGGAACGTAACGATTCCATATCCCTTCGGCGTCGGAGTGGGATGCCATTTGGGAGAAGGGTTCGACATAGCTTGCAATACTTCCTTCGATCCACCGAAACCATTCGTCGGAAATTTGGAAATCAAAGAAATATCTATGAATCAGCTGCGAATTAATAACTGGGTGGCTTTCAATTGCTACGCCGAAACCGGGGCTCGAATCGCATGGTCCCCTGCTTCTATCAATCTGGCCAATCGCCCTTTCGTCTTCTCCTCTGCAAATGCCTTCACTGTCGTTGGGTGCGACACCTTAGCCTTGATTCAGGGTTTGCCGGGGTTCGATTACACCAGTGGCTGCGTTTCCCTCTGCGCAAGCAAGGACGAAGTCACTAATGGCTCCTGCTCTGGTATTGGCTGCTGCCAGACTGCAATTCCCAGAGGGCTTAAGACCTTCCAAGCTGCCATAGGTAACCTCAACAATCACACCAAGACCTGGAAGTATAATCCTTGCAGCTACGCTTTTTTGGCCGACAGACAAGCTTACAACTTCGAGGTCTTCGATCTGGGCGATCCTAGTTTTTTAGCAACTGTTAAGAATGATATCCCAGTTGTTCTTGAATGGTCCGTGGGTGTCAGTACCTGCGAGGATGCCCGAAATGGGTTCGCCCCGTTTGTTTGCCAGAACAATTCTGAATGCTACGATTCAGAAAATGGTCCTGGCTATCTCTGCCGCTGCTCCCAAGGTTATCAAGGCAACCCCTATCTCTCACCGGGATGCCAAGATATCGACGAGTGCGATGGCCCAAACAATCCCTGCGAAGGAATCTGCGTCAATACGCCGGGAAGTTATTACTGCGCTTGCCCCAAGGGAAGCTATGGCGACGGTACAAAAAGCGGCAAGGGCTGCATAAAAAAGAATGTTCGATTTCCGCTGATCCAAGTTAGTCTCGGTAACTTCGGTTTCTTGTCTCTGATCATCGGATCTTCATTACTATACTTCAGCCTGAAAAAAAGGCACCTCGTTAAACTCAGAGAGAAGTTCTTCAAGGAGAATGGGGGATTGCTTTTGCAGTCGCAATTAGCAGGCCGTGAAGGTGGCGTAGATCAGTCAACCAGAATCTTTACAGCGGAGGAGCTTGAGAAGGCTACCGATCACTACTCGGAGAGCCGAGTGCTCGGCAGGGGAGGCAATGGAACAGTTTACAAAGGAATTTTGCCAGACAATAAGATCGTTGCCATAAAGAAGTCTAAAATTGCAGGGGAGAGCCAAATGGAGCAGTTCATAAACGAAGTGGTCATGCTTACTCAAATCAATCACCGGAACGTGGTGAAGCTCCTCGGCTGCTGTCTCGAGACGGAGGTCCCGCTTCTGGTTTATGAATACGTCTCGAACGGAACTCTATTTTACCATATCCACCACCGTAATAGCATTATCAACTCGATGTCGTGGGACAACCGCCTGAGAATAGCCACTGAAACTGCTTCGGCACTCTCCTACCTCCACTCTGCCGCTTCCATTCCGATCATTCACCGGGACGTCAAGTCGGCAAATATTTTGTTGGACTCCAAATGCACTGCCAAAGTAGCTGATTTTGGAGCTTCCAAGTTTATTCCGATCGATCAGTCTCAGATAAACACGCTGGTTCAAGGCACCTTCGGTTACTTGGATCCCGAATATTTCCAGACCAGTCAGTTAACGGAAAAGAGCGATGTCTACAGTTTCGGAGTAGTTCTAGCCGAACTTTTGACCGGAGAGACGGCGGTGTCGTTTGACAGACCCCAAGATCAAAGAAATCTGTCTGCCTACTTTGTTTCTTCCTTGCAACGGAATCGCATATTTCACATTTTCGAGGCTAGAGTTTTGAGAGAGGGGAATAGAGATCAACTCATAGCTGTGGCAGAGCTTACCAGACGATGCCTCAAGCTCAAGGGCGATGATAGGCCGACGATGAGGGAAGTGGTTGCAGAGTTAGAAGGGTTGAGCCGGCTGCAGAATCACCCTTGGGTTCGGCCAGACAACGAAGTCGATACTCATAGTTTGCTCGACACTACTGCCTGTGATCTCTATCCAGTCCCTCGTAGTCAGAATGGCATTTCTTCTGGGACCTACGGCAGCACAGAATCCGCAGGCATTTCCTCAGATAATCCCATGATTCCTCCCTTCCACCTCTCGAGATGA 2268 49.34 MSLHKHGHLLAALSFLIAVQMAAVMADDVISGCPSKCGNVTIPYPFGVGVGCHLGEGFDIACNTSFDPPKPFVGNLEIKEISMNQLRINNWVAFNCYAETGARIAWSPASINLANRPFVFSSANAFTVVGCDTLALIQGLPGFDYTSGCVSLCASKDEVTNGSCSGIGCCQTAIPRGLKTFQAAIGNLNNHTKTWKYNPCSYAFLADRQAYNFEVFDLGDPSFLATVKNDIPVVLEWSVGVSTCEDARNGFAPFVCQNNSECYDSENGPGYLCRCSQGYQGNPYLSPGCQDIDECDGPNNPCEGICVNTPGSYYCACPKGSYGDGTKSGKGCIKKNVRFPLIQVSLGNFGFLSLIIGSSLLYFSLKKRHLVKLREKFFKENGGLLLQSQLAGREGGVDQSTRIFTAEELEKATDHYSESRVLGRGGNGTVYKGILPDNKIVAIKKSKIAGESQMEQFINEVVMLTQINHRNVVKLLGCCLETEVPLLVYEYVSNGTLFYHIHHRNSIINSMSWDNRLRIATETASALSYLHSAASIPIIHRDVKSANILLDSKCTAKVADFGASKFIPIDQSQINTLVQGTFGYLDPEYFQTSQLTEKSDVYSFGVVLAELLTGETAVSFDRPQDQRNLSAYFVSSLQRNRIFHIFEARVLREGNRDQLIAVAELTRRCLKLKGDDRPTMREVVAELEGLSRLQNHPWVRPDNEVDTHSLLDTTACDLYPVPRSQNGISSGTYGSTESAGISSDNPMIPPFHLSR 755
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1894787 1897266 - Bpe008129.2 Bpe02g00285 98434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00285 755 Pfam Wall-associated kinase 162 276 IPR013695 GO:0004674|GO:0016021
Bpe02g00285 755 SMART serkin_6 416 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g00285 755 MobiDBLite consensus disorder prediction 727 743 - -
Bpe02g00285 755 Gene3D Phosphorylase Kinase; domain 1 392 491 - -
Bpe02g00285 755 Pfam Protein kinase domain 416 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g00285 755 CDD EGF_CA 291 324 - -
Bpe02g00285 755 CDD EGF 256 284 - -
Bpe02g00285 755 ProSiteProfiles EGF-like domain profile. 291 327 IPR000742 -
Bpe02g00285 755 SMART egf_5 294 333 IPR000742 -
Bpe02g00285 755 SMART egf_5 243 290 IPR000742 -
Bpe02g00285 755 ProSiteProfiles EGF-like domain profile. 240 290 IPR000742 -
Bpe02g00285 755 Pfam Wall-associated receptor kinase galacturonan-binding 33 85 IPR025287 GO:0030247
Bpe02g00285 755 ProSitePatterns Serine/Threonine protein kinases active-site signature. 538 550 IPR008271 GO:0004672|GO:0006468
Bpe02g00285 755 Gene3D Laminin 294 334 - -
Bpe02g00285 755 SUPERFAMILY Protein kinase-like (PK-like) 400 688 IPR011009 -
Bpe02g00285 755 ProSitePatterns Calcium-binding EGF-like domain signature. 291 315 IPR018097 GO:0005509
Bpe02g00285 755 ProSiteProfiles Protein kinase domain profile. 416 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g00285 755 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 26 704 IPR045274 GO:0007166
Bpe02g00285 755 ProSitePatterns Protein kinases ATP-binding region signature. 422 445 IPR017441 GO:0005524
Bpe02g00285 755 SMART egfca_6 291 333 IPR001881 GO:0005509
Bpe02g00285 755 MobiDBLite consensus disorder prediction 727 755 - -
Bpe02g00285 755 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE 26 704 - -
Bpe02g00285 755 SUPERFAMILY EGF/Laminin 289 334 - -
Bpe02g00285 755 CDD STKc_IRAK 422 690 - -
Bpe02g00285 755 Pfam Calcium-binding EGF domain 291 322 IPR001881 GO:0005509
Bpe02g00285 755 Gene3D Laminin 241 293 - -
Bpe02g00285 755 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 306 317 IPR000152 -
Bpe02g00285 755 Gene3D Transferase(Phosphotransferase) domain 1 492 709 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00285 Bpe-Chr2:1894787 Bpe14g00403 Bpe-Chr14:3774662 0 dispersed
Bpe08g00944 Bpe-Chr8:11859582 Bpe02g00285 Bpe-Chr2:1894787 1.68E-34 dispersed
Bpe02g00285 Bpe-Chr2:1894787 Bpe11g00405 Bpe-Chr11:3093826 4.67E-179 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63155 PF00069 Pkinase 1.40E-49 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00285 - - csv:101219978 983.786