Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00292 ATGGGTATGGCCGGCTATAACGAAGCGGGAGCACCAGGTACTTGCATCGTTCATCAACTTTTCCGGCCAGAACAGAATTTTCAGAGACAGTCGATTCCGCCGCCGCAAACCGCTCATTCTGATTCGAAACAATCAATTCATGCCCATCAAAAGATCGCCAACACCAACACCGACGCCGTGGCGGACTCCGGAGCCCACAGCTACATACGCCGGCCGAGAGGCCGTCCTCCTGGCTCCCGAAACAAACCCAAGGCTCCGATTATCGTGACGCGTGACATCTCCGGCTCACTCGGCTCACACGTGCTCGAAATCTCTGCAGGCTCAGATATCGTGGAAAGCCTTTCGAACTATGCCAGACGACAGGGGAGAGGAGTCTGCGTGATGAGCGGCAGCGGGACAATCTCAAACTTCAGCCTGCGTCAGCCTGCTGGAAACGCCGTCTCTCTTCCCGGACGGTTCGAGATTCTGTCGCTCACGGGAACCGTGCTTCCTCCTCCAGCTCCACCGAGTGCAGGCGGTTTATCCTTATTCTTAGCTGGTGGACAAGGACATGTAGTGGGAGGCAGCGTGGTCGGCCCTTTAATGGCTTCCAGCCCAGTGGTTTTAATGGCGGCCTCGTTTTCCAATGCCGTGTTTGAACGTTTGCCACTGGAGGAAGACGATCAGGAGGAGCCATTAGTTCAAGCATCCGGGTCGCAGTCGTCCGGAATAACAGGAGGTGGCGCTGCTGCACAGGTATCCGACGGTGGAAGGGGAAACGTCGGGAATGCAGTTTTAGGCGGTATGGGAGGAAACATCGCCGGTGGATATCCTCATTTACCGGCAGATATCTTTGGGTTGAGTGCAAGTGTTTCAAGGCCTCCATTTTAG 870 55.52 MGMAGYNEAGAPGTCIVHQLFRPEQNFQRQSIPPPQTAHSDSKQSIHAHQKIANTNTDAVADSGAHSYIRRPRGRPPGSRNKPKAPIIVTRDISGSLGSHVLEISAGSDIVESLSNYARRQGRGVCVMSGSGTISNFSLRQPAGNAVSLPGRFEILSLTGTVLPPPAPPSAGGLSLFLAGGQGHVVGGSVVGPLMASSPVVLMAASFSNAVFERLPLEEDDQEEPLVQASGSQSSGITGGGAAAQVSDGGRGNVGNAVLGGMGGNIAGGYPHLPADIFGLSASVSRPPF 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1926632 1927501 + Bpe008136.1 Bpe02g00292 98441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00292 289 MobiDBLite consensus disorder prediction 28 86 - -
Bpe02g00292 289 SUPERFAMILY AF0104/ALDC/Ptd012-like 96 222 - -
Bpe02g00292 289 CDD DUF296 100 179 IPR005175 -
Bpe02g00292 289 ProSiteProfiles PPC domain profile profile. 94 228 IPR005175 -
Bpe02g00292 289 Gene3D - 99 230 - -
Bpe02g00292 289 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 17 251 IPR014476 GO:0003680
Bpe02g00292 289 MobiDBLite consensus disorder prediction 28 62 - -
Bpe02g00292 289 Pfam Plants and Prokaryotes Conserved (PCC) domain 100 209 IPR005175 -
Bpe02g00292 289 MobiDBLite consensus disorder prediction 226 241 - -
Bpe02g00292 289 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 29 17 251 - -
Bpe02g00292 289 MobiDBLite consensus disorder prediction 220 248 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00292 Bpe-Chr2:1926632 Bpe04g00800 Bpe-Chr4:5254590 5.61E-57 dispersed
Bpe02g00292 Bpe-Chr2:1926632 Bpe11g00699 Bpe-Chr11:5379086 3.44E-59 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00292 - - rcu:8273670 258.455