Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00294 ATGGATCAGGGAGCGATTAGTGTTTCAGCTATGGATGCTTTCCAGAAGCTAGAAAAGGTGGGAGAAGGAACATATGGGAAGGTGTATAGGGCTGTAGAAAAGGCCACCGGAAAGATCGTAGCCCTCAAGAAAACTCGTCTTCATGAGGACGAGGAAGGTGTCCCACCCACCACTCTCCGGGAGGTCTCCATTCTGCGAATGCTTTCTAGGGATCCTCACGTCGTCAAGTTGCTGGATGTCAAACAAGGGCAGAATAAGGAAGGAAAAACAGTTCTATACTTAGTCTTTGAGTACATGGAAACTGATCTCAAGAAATTTATCAAAAGCTTCCGTCAAACGGGAGAGAACATTCCTGAAAAAACTGTCAAGAGTCTCATGTTTCAACTTTGCAAAGGTGTTGCTTTCTGTCATGGTCATGGAATCCTTCACAGGGATTTGAAACCTCACAATCTCTTGATGGACCGAACGACAACGACTCTAAAAATTGCAGACCTTGGGCTGGCTCGAGCATTTACTGTGCCAATTAAAAAGTACACTCATGAGATATTGACTCTTTGGTACAGAGCACCTGAAGTCCTTTTGGGGACCACCCACTATTCCACCGCAGTTGATATGTGGTCTGTCGCCTGTATATTTGCTGAGCTTGTGACAAAGCAAGCACTTTTCCCCGGAGATTCTGAGCTGCAGCAACTCCTACATATTTTCAGGTTGCTAGGTACCCCAAATGAAGAAATGTGGCCCGGTGTAAGCAAACTAATGAACTGGCACGAGTACCCCCAGTGGAAAACTCAACGCCTAGCAACTGCTGTTCCCAGCTTGGACGAAACGGGGCTGGATTTACTATCACAAATGTTGCATTACGATCCCTCCAAGAGGATTTCAGCTAAGAAAGCCATGGATCATCCTTATTTTGATGATGTTAACAAGGCTGCTCTC 936 45.73 MDQGAISVSAMDAFQKLEKVGEGTYGKVYRAVEKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHVVKLLDVKQGQNKEGKTVLYLVFEYMETDLKKFIKSFRQTGENIPEKTVKSLMFQLCKGVAFCHGHGILHRDLKPHNLLMDRTTTTLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGTTHYSTAVDMWSVACIFAELVTKQALFPGDSELQQLLHIFRLLGTPNEEMWPGVSKLMNWHEYPQWKTQRLATAVPSLDETGLDLLSQMLHYDPSKRISAKKAMDHPYFDDVNKAAL 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1938496 1940462 - Bpe025070 Bpe02g00294 98443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00294 312 ProSiteProfiles Protein kinase domain profile. 14 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g00294 312 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Bpe02g00294 312 SMART serkin_6 14 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g00294 312 Gene3D Phosphorylase Kinase; domain 1 2 100 - -
Bpe02g00294 312 Gene3D Transferase(Phosphotransferase) domain 1 102 311 - -
Bpe02g00294 312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Bpe02g00294 312 PANTHER - 7 310 - -
Bpe02g00294 312 SUPERFAMILY Protein kinase-like (PK-like) 9 307 IPR011009 -
Bpe02g00294 312 PANTHER CELL DIVISION PROTEIN KINASE 7 310 - -
Bpe02g00294 312 Pfam Protein kinase domain 14 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00294 Bpe-Chr2:1938496 Bpe07g00306 Bpe-Chr7:2228421 1.71E-151 dispersed
Bpe14g01305 Bpe-Chr14:10047068 Bpe02g00294 Bpe-Chr2:1938496 1.31E-43 dispersed
Bpe02g00294 Bpe-Chr2:1938496 Bpe04g01919 Bpe-Chr4:24144143 2.30E-117 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63156 PF00069 Pkinase 9.60E-73 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00294 K07760 - csv:101208001 564.303