Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00302 ATGAGCTTGATTTGGTTTCTGTTGTCATTGTCCCTCAACTTCAAAATGTGGCCTTGCGGATGTAGTGAAAATATTTCTGGCTCTGTACCATCTGTTGTGAACATTGGAGCTATCTTCTCGTTTGAATCTACCATTGGTAAAGTTGCTAAAATTGCCATGGAGGAAGCTGTAAAAGATGTCAACTCCAACTCCACCATTCTCCATGGCATAAAACTTTCTCTAAAAATGAAAAATTCCAATTGCAGTGGGTTTCTTGGAATGGTTGAAGTTCTTCAATTCATGGAGACGGACAATGTTGCCATTATAGGTCCACAATCTTCTGTGGTTGCTCACATTGTATCCCACGTGGCAAATGAACTTCAAGTTCCTCTTCTTTCATTTGCAGCCACAGACCCAACACTTTCTTCTCTTCAATTTCCATACTTTGTTAGAACTACCCAGAGTGACTTGTTCCAAATGACTGCGGTTGCTGAGATTGTTGATCATTATAATTGGAAAGAAATTATTGCTATTTTTATTGATGATGATTTTGGACGGAATGGGATCGCTGCTTTAGATGATCAACTTGCAGAGAGGCGATGTAGAATATCCTATAAAAAGGGAATCAGCCCTGGTTCTAAAGTTAGTCGAGATGAAATTATTGATCTACTAATTAAAGTTGCAATGATGGAATCCCGAGTTGTTGTTCTCCATGTAAATCCTAGTTCAGGTTTCATAATCTTTTCAGTGGCGCAATACCTTGGAATGATGGGTAATGGATATGTCTGGATAGCTACTGATTGGCTCTCATCTGTTTTAGATTCTGCATCTCCTCTGCCTTCTGACACCATGGATTCAATGCAAGGAGTTCTTGCTTTACGCCTACATACTGCAGATTCTGATAGAAAAAGAGAATTTTTGTCCCGGTGGCGCAAGTTAACAGGTGGTTCGTTGGGACTAAATTCTTATGCACTCTATGCTTATGATTCAGTTTGGCTGGCGGCTCATGCTATCGATAACTTTTTGAAGCAGGATGGAGTTATTTCATTTTCCAATGATTCCAGGATACATTCCGGAATCAGTGGCAATCTTAACCTTGAAGCAATGACCATTTTTGATGGTGGACCTGTCCTATTGAAGAACATACTCGAAAGCAATTTCATTGGTTTGACTGGTCCAGTTAAATTCAAGTCTGATAGATCACTCGTTTTTCCGGCGTATGACATCATTAATGTCATTGGGACCGGATATCGCCGAATTGGTTACTGGTCAAACTACACTGGTTTGTCAACAGTTCCTCCTGAGACGCTTTATAATAAGCCACCAAATCGCTCAAGTGCAACGCAGCAGCTCTATGGCGTTCTCTGGCCAGGAGAGACAGTGGCAAAACCCCGTGGATGGGTCTTTCCAAATAATGGGAAGGAACTAAAAATTGGCGTGCCAAATCGGTATAGTTACAGAGAATTTGTGTCACAAGTGCGAGGGACTGATGTGTTCAAGGGTTTTTGCATAGATGTCTTTGTAGCTGCTGTAAACCTCCTGCCATATGCCGTTCCATACCGCTTTGTTTCATTCGGGGATGGTAAAAAGAACCCAAGCTACACAGACCTTGTGAGATTGATAACGACAGGCTATTTTGATGCGGCTGTTGGTGACATTGCGATAGTTACTAACCGAACAAAGATTGTGGATTTTACTCAGCCGTATGCAGCATCTGGGCTTCTTGTTGTTGCCCCATTCAAAAAACTCAATACTGGTCCCTGGGCTTTTTTGCGTCCATTTTCTGCACCTCTGTGGATTGTCACTGCTAGTTTCTTCCTTTTCATTGGAATAGTTGTTTGGATCATGGAGCATAGGATAAATGATGAGTTCAGGGGCCCACCTAAAAGACAAATAATAACCATTTTGTGGTTTAGCTTCTCTACCTTGTTTTTTGCCCACAAGGAGAACACTGTGAGCACGCTAGGCCGAATAGTGTTGCTTATTTGGCTCTTTGTTGTTTTGATAATCAATTCCAGCTACACTGCAAGTCTAACGTCAATTCTCACAGTCCAGCAGCTCTCTTCCCCCATTAGAGGAATTGAAAGCTTAAAGGAGGGTGATGACCCAATAGGATACCAAGTGGGATCTTTTGCCGAGTATTATTTGACCCAGGAGCTCAATATATCTCAATCCAGGCTTATTGCTCTTGGATCACCCGAAGAAAATGCCAAGGCTCTGCAGCTTGGCCCTGCCAAGGGAGGAGTTGCTGCCATTGTCGACGAGCGCCCATATTTAGAACTATTCCTTTCAAGCCAATGTAAATACAGAGTTGTTGGTCAAGAGTTCACAAAAAGTGGCTGGGGCTTTGCCTTTCCTCGTGACTCTCCATTGGCTGCGGATATGTCAACTGCAATTTTGCAATTGTCTGAGAATGGTGATCTACAGAGGATTCATGATAAATGGCTGAAGAAAAGCACTTGCAGCTTAGATACAACTGAAATCGATTCAGACCAGCTTCATCTTCGGAGCTTCTTGGGACTCTTTCTTATTTGTGGTATAGCCTGTTTCATTGCCATCATCATATATTTCATTCAGATTATCAAACAGATGTGCCATGCTCCACCCACCGAATCTATTTCTAGCGGTCGGGGTAGTTCACTTTCTGGCCGTCTCGGACGGCTTTGGTCAAAATTGGATGAGAAGGAAAGTGATTCCAACAGTCGTAGCAAAAGAAGGAAACTGGAAGGATCTTTACATCAGCATGATAATGATGATTTATTTGCCGAAAATTCCGCTAGGAGACAGACGCAATCAATTAGCGAGAGTAACTTGTAA 2796 42.2 MSLIWFLLSLSLNFKMWPCGCSENISGSVPSVVNIGAIFSFESTIGKVAKIAMEEAVKDVNSNSTILHGIKLSLKMKNSNCSGFLGMVEVLQFMETDNVAIIGPQSSVVAHIVSHVANELQVPLLSFAATDPTLSSLQFPYFVRTTQSDLFQMTAVAEIVDHYNWKEIIAIFIDDDFGRNGIAALDDQLAERRCRISYKKGISPGSKVSRDEIIDLLIKVAMMESRVVVLHVNPSSGFIIFSVAQYLGMMGNGYVWIATDWLSSVLDSASPLPSDTMDSMQGVLALRLHTADSDRKREFLSRWRKLTGGSLGLNSYALYAYDSVWLAAHAIDNFLKQDGVISFSNDSRIHSGISGNLNLEAMTIFDGGPVLLKNILESNFIGLTGPVKFKSDRSLVFPAYDIINVIGTGYRRIGYWSNYTGLSTVPPETLYNKPPNRSSATQQLYGVLWPGETVAKPRGWVFPNNGKELKIGVPNRYSYREFVSQVRGTDVFKGFCIDVFVAAVNLLPYAVPYRFVSFGDGKKNPSYTDLVRLITTGYFDAAVGDIAIVTNRTKIVDFTQPYAASGLLVVAPFKKLNTGPWAFLRPFSAPLWIVTASFFLFIGIVVWIMEHRINDEFRGPPKRQIITILWFSFSTLFFAHKENTVSTLGRIVLLIWLFVVLIINSSYTASLTSILTVQQLSSPIRGIESLKEGDDPIGYQVGSFAEYYLTQELNISQSRLIALGSPEENAKALQLGPAKGGVAAIVDERPYLELFLSSQCKYRVVGQEFTKSGWGFAFPRDSPLAADMSTAILQLSENGDLQRIHDKWLKKSTCSLDTTEIDSDQLHLRSFLGLFLICGIACFIAIIIYFIQIIKQMCHAPPTESISSGRGSSLSGRLGRLWSKLDEKESDSNSRSKRRKLEGSLHQHDNDDLFAENSARRQTQSISESNL 931
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1988917 1992348 - Bpe008144.2 Bpe02g00302 98451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00302 931 Pfam Receptor family ligand binding region 51 407 IPR001828 -
Bpe02g00302 931 Gene3D - 464 577 - -
Bpe02g00302 931 PANTHER GLUTAMATE RECEPTOR 3.3 23 925 - -
Bpe02g00302 931 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 320 332 - -
Bpe02g00302 931 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 106 134 - -
Bpe02g00302 931 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 46 62 - -
Bpe02g00302 931 CDD PBP1_GABAb_receptor_plant 34 426 IPR044440 -
Bpe02g00302 931 CDD GluR_Plant 467 809 - -
Bpe02g00302 931 Gene3D - 759 816 - -
Bpe02g00302 931 Pfam Ligand-gated ion channel 811 842 IPR001320 GO:0015276|GO:0016020
Bpe02g00302 931 MobiDBLite consensus disorder prediction 886 916 - -
Bpe02g00302 931 SMART GluR_14 470 811 IPR001320 GO:0015276|GO:0016020
Bpe02g00302 931 MobiDBLite consensus disorder prediction 886 931 - -
Bpe02g00302 931 Pfam Bacterial extracellular solute-binding proteins, family 3 490 810 IPR001638 -
Bpe02g00302 931 Gene3D - 578 720 - -
Bpe02g00302 931 Gene3D - 148 422 - -
Bpe02g00302 931 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 23 925 - -
Bpe02g00302 931 Gene3D - 51 397 - -
Bpe02g00302 931 SUPERFAMILY Periplasmic binding protein-like I 28 460 IPR028082 -
Bpe02g00302 931 SUPERFAMILY Periplasmic binding protein-like II 445 812 - -
Bpe02g00302 931 PIRSF IGluLR_plant 1 930 IPR017103 -
Bpe02g00302 931 MobiDBLite consensus disorder prediction 917 931 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00302 Bpe-Chr2:1988917 Bpe06g00162 Bpe-Chr6:3173812 0 dispersed
Bpe02g00302 Bpe-Chr2:1988917 Bpe14g00707 Bpe-Chr14:5512767 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00302 K05387 - jre:109011487 1402.11