Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00305 ATGGAGTGGCAGAATCAGCAGCAAAACCAAGCAGAGCAACTGCCAATGCAACTGCCGATTGATCAATTGCAGAACCCAGATGGGTTGTACGTCAAAGTGATGACGGACGAGCAAATGGAGCTTCTCCGGCGACAGATCTCCGTCTACGCTACCATTTGTGAGCAGCTTGTCGAGATGCACAAGGCGATGACTGCCCAACAGGACATAACAGGTATCTATCACTATATCAAATTAGTATGCATCTATGAGTTTTATTTAGCTGGAGTTCTTAATCTCGCAGGAATGAGGTTGGGGAATCTCTACTGTGATCCAATGATGGCATCTAGCGGACACAAGATTACTGCTCGACAAAGGTGGACTCCAACTCCTGTGCAGCTTCAGATGCTGGAGCGTATGTTTGACGAAGGAAATGGCACTCCAAGCAAGCAGAAGATTAGAGAGATAACTGTGGAGCTCTCACAACACGGCCAAATCTCCGAAGCAAATGTGTATAATTGGTTCCAAAACAGAAGAGCTCGTTCGAAAAGAAAGCAGTCGGTTTCGATCCAAAACAATAATGCAGATTCAGAAGTTGAAACTGAAGTCGAATCTCCAAAGGAAGAGAAGACGAAGCTGGTAGGCGCCCGATCGTTTGAGAATCTCGGACAGAGGACGGGGGATGTTTATAACCAGAAATCAGAGTTAAATGCCGAAAATCAGTACTTGGATGAACAATCGAATAAAGGGGAACCCGTTTTTCACTTCAGATCTTGTAATTCAGGCCATATGAGTGCCATGCCGAGTCAAAGTATGTGGATGGATCTGACTATCAACAAATTGGAAATTCCGGGTTACAGCTCCTACAATCCTTGTGACGGTTATGACTTGATTGAGTGA 876 45.09 MEWQNQQQNQAEQLPMQLPIDQLQNPDGLYVKVMTDEQMELLRRQISVYATICEQLVEMHKAMTAQQDITGIYHYIKLVCIYEFYLAGVLNLAGMRLGNLYCDPMMASSGHKITARQRWTPTPVQLQMLERMFDEGNGTPSKQKIREITVELSQHGQISEANVYNWFQNRRARSKRKQSVSIQNNNADSEVETEVESPKEEKTKLVGARSFENLGQRTGDVYNQKSELNAENQYLDEQSNKGEPVFHFRSCNSGHMSAMPSQSMWMDLTINKLEIPGYSSYNPCDGYDLIE 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2008735 2010532 - Bpe008147.1 Bpe02g00305 98454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00305 291 PANTHER WUSCHEL-RELATED HOMEOBOX 13 91 289 IPR044559 GO:0003700
Bpe02g00305 291 SUPERFAMILY Homeodomain-like 115 180 IPR009057 -
Bpe02g00305 291 Pfam Homeodomain 116 176 IPR001356 GO:0003677
Bpe02g00305 291 ProSiteProfiles 'Homeobox' domain profile. 112 177 IPR001356 GO:0003677
Bpe02g00305 291 PANTHER WUSCHEL-RELATED HOMEOBOX 13 1 72 IPR044559 GO:0003700
Bpe02g00305 291 CDD homeodomain 116 178 IPR001356 GO:0003677
Bpe02g00305 291 MobiDBLite consensus disorder prediction 175 197 - -
Bpe02g00305 291 Gene3D - 118 182 - -
Bpe02g00305 291 PANTHER - 1 72 - -
Bpe02g00305 291 SMART HOX_1 114 181 IPR001356 GO:0003677
Bpe02g00305 291 PANTHER - 91 289 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00305 Bpe-Chr2:2008735 Bpe08g00132 Bpe-Chr8:690428 4.80E-14 dispersed
Bpe01g00455 Bpe-Chr1:2778456 Bpe02g00305 Bpe-Chr2:2008735 1.90E-15 transposed
Bpe13g00389 Bpe-Chr13:11643208 Bpe02g00305 Bpe-Chr2:2008735 3.14E-79 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20858 PF00046 Homeodomain 4.70E-18 CL0123 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00305 - - bhj:120085747 335.88