Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00310 CAGGTTACCGAGATTCCAGCCCAGTTGGAGCAACCTTCAAAAGAGTCTGAAGATTGTACCATTGTAGATGCAGAAGATAGTGACTTTCCAGTCCCAATGTTTGTGCTGCACACAGAAGCAATGTTGGAGGAAATTGATAGGATGGAGGAAGTTGAAATGAAAGATATAAACGAGGATCCCGTCGAGGATATAGACAGCTGCGATAAGAACAATTCACTGGCTGTTGTCGAGTACTTAGAAGATTTATTTAGCCATTATAGGAATTCTGAGATTTCAAACTGTGTTTCACCAGATTACATGGTTCAGCAATCGGATATTAATGAAAGAATGAGAGGTATTCTCGTTGATTGGCTGATTGAGGTTCATTACAAGTTTGAGCTGATGGATGAGACCTTGTATCTTACCGTCAACCTCATTGATAGATTTTTAAGTCTTCAACCAGTGGTGAGGAAGAAACTCCAGTTGGTAGGGGTGACAGCCATGCTTCTTGCTTGCAAATATGAAGAAGTTTCAGTTCCAATCGTGGACGATCTTATTCTGATATCTGACAAGGCTTACTGCAGAAAAGAAGTGCTTGAAATGGAAAAATTAATGGTCAATACCTTACAGTTTCATATGTCTGTTCCTACTCCATATGTGTTTATGAAGAGATTTCTCAAAGCTTCTCAATCTCACCAAAAGCTTGAGCTACTTTCCTTCTTCATGGTCGAGCTTTGCCTAGTCGAGTATGAAATGCTCAAGTTCCATCCTTCTCTGTTATCTGCGGCTGCAATTTTCACCGCGCAGTGTGCTTTAAATGGGTTCCAAGAATGGAGCAAGACAAGTGAATGGTACACTGGCTATTCAGAAGAGCAGCTTCTGGAATGCTCAATGAAGATGGTTGCTTTCCATCAGAAAGCTGGAACAGGAAAGCTAACTGGAGTTCACCGGAAGTACAGTACAGCCAAGTTTGGATATGCTGCCAGAATTGAGCCGGCTAAGTTTCTATTAGAGGAAAGATTCTAA 1005 41.29 QVTEIPAQLEQPSKESEDCTIVDAEDSDFPVPMFVLHTEAMLEEIDRMEEVEMKDINEDPVEDIDSCDKNNSLAVVEYLEDLFSHYRNSEISNCVSPDYMVQQSDINERMRGILVDWLIEVHYKFELMDETLYLTVNLIDRFLSLQPVVRKKLQLVGVTAMLLACKYEEVSVPIVDDLILISDKAYCRKEVLEMEKLMVNTLQFHMSVPTPYVFMKRFLKASQSHQKLELLSFFMVELCLVEYEMLKFHPSLLSAAAIFTAQCALNGFQEWSKTSEWYTGYSEEQLLECSMKMVAFHQKAGTGKLTGVHRKYSTAKFGYAARIEPAKFLLEERF 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2043718 2045326 + Bpe008152.1 Bpe02g00310 98459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00310 334 SUPERFAMILY Cyclin-like 208 327 IPR036915 -
Bpe02g00310 334 SMART cyclin_7 116 200 IPR013763 -
Bpe02g00310 334 SMART cyclin_7 213 295 IPR013763 -
Bpe02g00310 334 Gene3D - 81 321 - -
Bpe02g00310 334 PIRSF Cyclin_A_B_D_E 2 334 IPR039361 -
Bpe02g00310 334 PANTHER CYCLINS 10 327 IPR039361 -
Bpe02g00310 334 SUPERFAMILY Cyclin-like 70 206 IPR036915 -
Bpe02g00310 334 SMART Cyclin_C_2 209 326 IPR004367 -
Bpe02g00310 334 ProSitePatterns Cyclins signature. 111 142 IPR006671 -
Bpe02g00310 334 PANTHER CYCLIN-B2-3-RELATED 10 327 - -
Bpe02g00310 334 CDD CYCLIN 110 199 IPR013763 -
Bpe02g00310 334 Gene3D - 95 207 - -
Bpe02g00310 334 CDD CYCLIN 207 294 IPR013763 -
Bpe02g00310 334 Pfam Cyclin, C-terminal domain 209 324 IPR004367 -
Bpe02g00310 334 Pfam Cyclin, N-terminal domain 81 206 IPR006671 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00310 Bpe-Chr2:2043718 Bpe04g00534 Bpe-Chr4:3391110 1.78E-72 dispersed
Bpe02g00310 Bpe-Chr2:2043718 Bpe02g00023 Bpe-Chr2:208686 1.75E-80 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00310 K21777 - tcc:18591703 516.153