Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00314 ATGGAAAAACAGAGAGCGGAGGAGATTGCGATCATCGGCGCCGGAGTCAGCGGCCTCTTAGCCTGCAAATGTGCGGTGGAAAAAGGGTTCAGCCCCGTCGTCTTCGAAGCCACAAGCATCATAGGAGGGGTTTGGTCCAAAACTATAGAGTCCACCAAACTTCAAACGCCCAAAAGCTTTTACCAGTTCTCAGATTTTCCATGGCCTTCTTCCACGAAAGACACATTCCCTCGCCATGATCAAGTGGTGGAGTACCTTCAAGCTTACGCTACCCACTTTAACATTTACCCCAACATCAAATTCAACTCTAAAGTCGTCACTATCGACTTTTATGGACCGTCCGAGGAGACCATGGTTTGCTGGGATTTATGGGGTGGAACAGGTGGCCCTTTCTCTCCTGCTGGCAAGTGGAATCTCACTGTAAATGAAGCCGATGTCGTTTGCGGGGAGGTAATGCAGTTCCTTTTGGCTTTGGAAGCGCTAAAATGGTGTATTTTCAGTTCTAAAGCGATATTTTCATTGCAGAAAGTGAAGGTTTATGAGTTTGATTTTGTGATTCTCTGCATTGGAAAGTACAGTGATCTTCCAAACTACCCAGAGTTTCCTCTAAACAGAGGGCCAGAAATTTTTGGAGGTAAAATCTTGCATTCAATGGACTATGCTGCTATGGATGAGCAAAGTGCTGCAGAATTAATCAAAGATAAGCTCGTCACCGTCGTGGGTTTTCATAAATCAGCGTTGGATATTGCAGCAGAAGTCGCAAAAAAGAATGAGGAAAGACACCCTTGTACGTTGCTATTCAGAGCAGCTCACTGGACTGTTCCTGAAAAATTTGTCTCTCTTTTTTCACGAGGGTTCAATCGCTTTACAGAGATGATGATTCACAAGCCCGACGAAGGATTCTTCCTCTGTCTCTTAGTTTTCATTCTAACCCCATTGATGCACATATTTGGGAAACTGGTGGAATTGCATCTTACGTTGATTTATCCATTGAAGAAGTACGACGTGGTTCCTGGCCATAGCTTCCTTCACCAGATTTCTTCGTGCATGTTCATGGTTTTGCCCTCTAATTTCTATAACCTCGTGAAGAAAAGGAAACTCATTCTTAAAAGATCAGAGTTTTTAGACTTCTGTGAAGAGGGTCTGATCGTTAACGGCGAAACCACGCCTGTTTCATCAGATATCGTCATTTTCGCTACTGGGTACAAAAGCGACGAAAAGCTTAACAACATTTTCTCGTCGTCTTACTTCCAGAAATGCATGACTTCTTTGACTGCTCCACTCTACAGAGAATGCATCCATCCTCGAATTCCAAGCTTGGGAATACTTGGATATGCAGACAGTGCGTCGGTTCTGTTCACGACGGAGATGAGAGCCAAGTGGATGTGCCACTTTCTGGCAGGAAAATTGCGATTACCTTCCATTAGAGAGATGGAAAGCTACGGTATTCGATCGGAGAAATGTATGAGAAAGTATTCGAGAGGAGAGTATAACAGATTCTGTGCAACGGCTCTGCTTCAAATTCACTGCAACGACCAACTCTGCAGGGACATTGGCTGCAACCCCAGACGGAAAAAGTGGTTTCTCCCTAATCTCTTTGCTTCCCACAGTTCAGTGGATTACAGAAACATGGACTCTTAA 1641 44.42 MEKQRAEEIAIIGAGVSGLLACKCAVEKGFSPVVFEATSIIGGVWSKTIESTKLQTPKSFYQFSDFPWPSSTKDTFPRHDQVVEYLQAYATHFNIYPNIKFNSKVVTIDFYGPSEETMVCWDLWGGTGGPFSPAGKWNLTVNEADVVCGEVMQFLLALEALKWCIFSSKAIFSLQKVKVYEFDFVILCIGKYSDLPNYPEFPLNRGPEIFGGKILHSMDYAAMDEQSAAELIKDKLVTVVGFHKSALDIAAEVAKKNEERHPCTLLFRAAHWTVPEKFVSLFSRGFNRFTEMMIHKPDEGFFLCLLVFILTPLMHIFGKLVELHLTLIYPLKKYDVVPGHSFLHQISSCMFMVLPSNFYNLVKKRKLILKRSEFLDFCEEGLIVNGETTPVSSDIVIFATGYKSDEKLNNIFSSSYFQKCMTSLTAPLYRECIHPRIPSLGILGYADSASVLFTTEMRAKWMCHFLAGKLRLPSIREMESYGIRSEKCMRKYSRGEYNRFCATALLQIHCNDQLCRDIGCNPRRKKWFLPNLFASHSSVDYRNMDS 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2060986 2062972 - Bpe008155.1 Bpe02g00314 98463

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00314 546 PIRSF FMO 162 533 IPR000960 GO:0050660|GO:0050661
Bpe02g00314 546 PIRSF FMO 5 125 IPR000960 GO:0050660|GO:0050661
Bpe02g00314 546 Gene3D - 380 532 IPR036188 -
Bpe02g00314 546 Pfam Flavin-binding monooxygenase-like 7 123 IPR020946 GO:0004499|GO:0050660|GO:0050661
Bpe02g00314 546 Pfam Flavin-binding monooxygenase-like 176 522 IPR020946 GO:0004499|GO:0050660|GO:0050661
Bpe02g00314 546 PANTHER FLAVIN-CONTAINING MONOOXYGENASE 156 544 - -
Bpe02g00314 546 PANTHER DIMETHYLANILINE MONOOXYGENASE 7 149 - -
Bpe02g00314 546 SUPERFAMILY FAD/NAD(P)-binding domain 385 543 IPR036188 -
Bpe02g00314 546 SUPERFAMILY FAD/NAD(P)-binding domain 9 260 IPR036188 -
Bpe02g00314 546 Gene3D - 3 150 IPR036188 -
Bpe02g00314 546 Gene3D - 166 300 IPR036188 -
Bpe02g00314 546 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Bpe02g00314 546 PANTHER DIMETHYLANILINE MONOOXYGENASE 156 544 - -
Bpe02g00314 546 PANTHER FLAVIN-CONTAINING MONOOXYGENASE 7 149 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00314 K00485 FMO; dimethylaniline monooxygenase (N-oxide forming) / hypotaurine monooxygenase [EC:1.14.13.8 1.8.1.-] - pop:7494692 672.93
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe02g00314 Bpe14g00290 CCT
Bpe02g00314 Bpe14g00290 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00314 Bpe-Chr2:2060986 Bpe14g00290 Bpe-Chr14:2871363 7.77E-106 dispersed
Bpe02g00314 Bpe-Chr2:2060986 Bpe02g02167 Bpe-Chr2:22943152 1.32E-109 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g187 . . . . . Bpe02g00314 . . . . . . . . . . . Bhi04g01538 Tan02g1562 Cmetu03g0531 . Hepe08g1457 . Lcy13g2236 . . . . . . . Cone4ag1711 Cone7ag1629 . . . . . . Blo17g00265 . . . Bpe14g00290 . . Bma02g00330 . . . . . . . . . . . . . . . . Cla08g00973 Cam08g1422 Cec08g1001 Cco08g1124 Clacu08g1126 . Cre08g0910 Lsi08g00821 . Chy03g00644 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000621 2 8 2 2 1 4 2 5 5 4 3 5 4 3 4 4 4 1 1 3 4 3 2 4 4 3 1 4 3 7 102
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe02g00314 Bpe_Chr02 FPKM 43.675934 44.342129 58.791485 55.870174 68.093803 80.744072 71.947754 88.878311 93.562996 86.320709