Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g00331 | ATGTCCCCGCCGGCGAGGAGCAAAGGCTGGAATGGGTCGCCGGAGAAGCATTATCCTCCGCCATATGCCACCCATGAAGAGGTCTCAGTAGACCCCATTATCTTCTGGGACACTCTCCGGCGCTTCCATTTCACTATGAACACAAAGTTCATGATTCCTGTGATTGGGGGGAAGGAGCTAGACCTGCATGTATTATATTTGGAGGTCACCAGAAGGGGCGGTTTTGAAAAGGTAGTTGCAGAGAAAAAATGGAGGGAAGTGGGCAATATATTTAGATTCTCCCCTACAACAACAAGTGCTTCTTTTGTGTTGAGGAAACACTACTTCAGTCTTCTCTACCATTATGAACAGGTTTACTTCTTCGAGAGACAAGGCGTTCTCACTACTCCAAGAGGTTCCTCTTTCCTCCCTAATGCTCTTTTTTTTTCGTCAGAATCTCTCTATCTCTCTCTCTCTCTAGCAGCTGCATTTACTATTAGTGACCCTTCATGTATAAATGAGTTGGCTATTGTGGAGTACACTCCAAAGAAGACGAATTCGCCTGAACCAACTGCAGAAGTTATTGGAACAATTGAAGCGAAGTTCGACTGTGGTTATTTTGTGTCTGCAAAAGTGGGTTCAGAGATTCTCAGGGGAGTGCTTTACCATCCAGAAGAGCCAGCTTTATTATCACCGCCCTCATTTCCACATTTCAACAATGTGCAAGCACTTGTTCCCTACAAACATGGCGGACAGTACCATTCCAGTGGCCGGAGAAGGAGGAGGAGCCGGAGAAAGGGAGACCCGAACTACCCAAAACCTAACAGAAGTGGGTATAACTTCTTTTTCGCAGAAAAACATTACAAACTCAAGTCTCTGTATCCAAATAGAGAGAGGGAGTTTACAAAGATGATAGGAGAGTCTTGGAGCAATCTCAGCCCTGATGAGAGGATGGTTTACCAAAACATAGGATTGAAAGATAAGGAAAGATACAAGAGGGAATTGAAAGAGTACAAAGACAGGCAGACACTGGGAGTTAATGAATGA | 1026 | 44.74 | MSPPARSKGWNGSPEKHYPPPYATHEEVSVDPIIFWDTLRRFHFTMNTKFMIPVIGGKELDLHVLYLEVTRRGGFEKVVAEKKWREVGNIFRFSPTTTSASFVLRKHYFSLLYHYEQVYFFERQGVLTTPRGSSFLPNALFFSSESLYLSLSLAAAFTISDPSCINELAIVEYTPKKTNSPEPTAEVIGTIEAKFDCGYFVSAKVGSEILRGVLYHPEEPALLSPPSFPHFNNVQALVPYKHGGQYHSSGRRRRRSRRKGDPNYPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWSNLSPDERMVYQNIGLKDKERYKRELKEYKDRQTLGVNE | 341 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2162620 | 2164178 | + | Bpe008172.2 | Bpe02g00331 | 98480 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g00331 | 341 | CDD | ARID_HMGB9-like | 31 | 116 | IPR045303 | GO:0003677 | |
Bpe02g00331 | 341 | SMART | ARID_2 | 26 | 116 | - | - | |
Bpe02g00331 | 341 | Pfam | HMG (high mobility group) box | 265 | 332 | IPR009071 | - | |
Bpe02g00331 | 341 | Gene3D | - | 23 | 127 | IPR036431 | GO:0003677 | |
Bpe02g00331 | 341 | SUPERFAMILY | HMG-box | 262 | 333 | IPR036910 | - | |
Bpe02g00331 | 341 | Pfam | ARID/BRIGHT DNA binding domain | 35 | 116 | IPR001606 | GO:0003677 | |
Bpe02g00331 | 341 | MobiDBLite | consensus disorder prediction | 246 | 260 | - | - | |
Bpe02g00331 | 341 | PANTHER | HIGH MOBILITY GROUP B PROTEIN 9 | 13 | 337 | - | - | |
Bpe02g00331 | 341 | SUPERFAMILY | ARID-like | 24 | 129 | IPR036431 | GO:0003677 | |
Bpe02g00331 | 341 | ProSiteProfiles | ARID domain profile. | 29 | 120 | IPR001606 | GO:0003677 | |
Bpe02g00331 | 341 | SMART | bright_3 | 30 | 121 | IPR001606 | GO:0003677 | |
Bpe02g00331 | 341 | Gene3D | High mobility group box domain | 249 | 338 | IPR036910 | - | |
Bpe02g00331 | 341 | ProSiteProfiles | HMG boxes A and B DNA-binding domains profile. | 265 | 332 | IPR009071 | - | |
Bpe02g00331 | 341 | SMART | hmgende2 | 264 | 333 | IPR009071 | - | |
Bpe02g00331 | 341 | PANTHER | HIGH MOBILITY GROUP B PROTEIN 9 | 13 | 337 | - | - | |
Bpe02g00331 | 341 | CDD | HMGB-UBF_HMG-box | 265 | 329 | - | - | |
Bpe02g00331 | 341 | MobiDBLite | consensus disorder prediction | 242 | 269 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g00331 | Bpe-Chr2:2162620 | Bpe04g01069 | Bpe-Chr4:8141966 | 1.54E-67 | dispersed | |
Bpe02g00331 | Bpe-Chr2:2162620 | Bpe05g01140 | Bpe-Chr5:23684783 | 3.15E-75 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
20862 | PF01388 | ARID | 2.90E-18 | CL0123 | Bpe | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g00331 | - | - | csv:101219101 | 457.603 |