Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00337 ATGAAATGTCGTTGTTCTTTGCTATTTGTTACTTCATTATGGGTCGCAATGTGCATGGCCGTAGAAGGGCTGATTAAGCTGCCAAGAAATGAAACAGTCCCTGCTGTTATCGTGTTTGGAGACTCCATTGTTGATACAGGCAACAACAACAATCTTCTCTCTCTCTCTAAGTGCAATTTCCCTCCCTATGGCAGAGATTTCTTTGGTGGAATACCCACTGGAAGATTTTCCAATGGAAAGGTTCCCTCAGACCTCATAGTTGAAGAACTCGGAATCAAAGAGCTATTACCACCGTACATGGATCCAAATCTGCGATCTATTGATCTTCTTACTGGTGTAAGCTTTGCTTCAGGTGGTTCAGGCTATGATCCTTTGACCCCAGCATTGTCGGTCACGTCATTATCTGAGCAGTTGACAGAGTTCAAGGAATACATTGGGCGATTGAAAGGAATAGTTGGAGAAGAGAGAACAGGTTTCATACTGGCCAAAAGTATAGTTGCTATTATTTCAGGCAGTAATGATATTGGAAACACGTATTTTGCTATGGGAATTAGAAGATTGGAGTACGATATCCCTTCTTACACTGATCTTATGCTCAACTCCGCCGCTTCTTTCCTCAAGGAACTATATAAACTCGGGGCGAGAAGAATAGGAGTGTTCAGTACTCCACCAATAGGATGTGTTCCAGCTTTAAGAACTCTAGGCGGAGGCCTTCTGAGACAATGTTCAGAAGAAGCAAACGAAGCCGCAAAGCTCTTCAACTCCAAGCTTTCTTCTCAAATCCATTTGCTGAGACAAAATCTCCCCCTCGCCAAGATCGTCTATGTCGACATTTATAACCCATTTCTGGATATCATAAAAAACCCGAGAAGATTCGCAGGGTTCGAAATTGCAAATAAAGGGTGCTGTGGAACTGGGACATTGGAGGCATCAGTCCTGTGCAACGGGCTTGAACCAGAAACTTGCAGAGACGACAGCAAGTATGTGTTTTGGGATAGCTTTCATCCTACTGAAAGAGTCTACAAAATCCTCGTCTCTCAGCTCCTGAATAAATACGTCTACAGCTTCTTATGA 1074 43.2 MKCRCSLLFVTSLWVAMCMAVEGLIKLPRNETVPAVIVFGDSIVDTGNNNNLLSLSKCNFPPYGRDFFGGIPTGRFSNGKVPSDLIVEELGIKELLPPYMDPNLRSIDLLTGVSFASGGSGYDPLTPALSVTSLSEQLTEFKEYIGRLKGIVGEERTGFILAKSIVAIISGSNDIGNTYFAMGIRRLEYDIPSYTDLMLNSAASFLKELYKLGARRIGVFSTPPIGCVPALRTLGGGLLRQCSEEANEAAKLFNSKLSSQIHLLRQNLPLAKIVYVDIYNPFLDIIKNPRRFAGFEIANKGCCGTGTLEASVLCNGLEPETCRDDSKYVFWDSFHPTERVYKILVSQLLNKYVYSFL 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2197541 2199276 - Bpe008178.1 Bpe02g00337 98486

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00337 357 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 36 47 IPR008265 GO:0006629|GO:0016298
Bpe02g00337 357 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 15 352 - -
Bpe02g00337 357 Gene3D SGNH hydrolase 25 353 IPR036514 -
Bpe02g00337 357 PANTHER GDSL ESTERASE/LIPASE EXL3 15 352 - -
Bpe02g00337 357 Pfam GDSL-like Lipase/Acylhydrolase 36 346 IPR001087 GO:0016788
Bpe02g00337 357 CDD SGNH_plant_lipase_like 34 352 IPR035669 -
Bpe02g00337 357 SUPERFAMILY SGNH hydrolase 164 350 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00337 - - - qsu:111991232 482.256
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00337 Bpe-Chr2:2197541 Bpe11g00515 Bpe-Chr11:3985819 8.96E-120 dispersed
Bpe13g01029 Bpe-Chr13:15996563 Bpe02g00337 Bpe-Chr2:2197541 2.90E-45 dispersed
Bpe02g00337 Bpe-Chr2:2197541 Bpe09g00008 Bpe-Chr9:79002 6.46E-81 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1160 . . . . Bpe02g00337 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cma12g00389 . . . Cpe11g00272 . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001408 2 2 3 2 2 2 3 1 2 2 1 3 2 2 2 2 2 5 3 1 2 4 4 2 3 1 2 2 2 7 73
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe02g00337 Bpe_Chr02 FPKM 0.0 0.0 0.0 1.142334 0.0 0.0 0.0 0.0 0.0 0.0