Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00363 GAAAGACGAACTTGCCCAGAGCATGCGGCACTTGCTCCTGATTTTGTAAAAGATGATAACCTGTCAGTTGGTCTTCGTGCAGCACGGAAAACTAAGAAGCCCAAGCATGGAGATATGGCTTATGAAGGGGATGTTGATTGGGAGAACTTGACAGATGAGTCTGACTTTCTTGAAAATCATCGTGCAATGGAAAATGATTATTGTTCTAGAGAAGGAAGGGATTCTGGTCTAAATATTGATATGGACATTGACAATGGCGGGGCGGCTGCAATATCAGTAGGACTGAAAGCTCATGCAGTTGGTCTGATTGAAAAAATTAGATTTAAAGAGGTCTTAAAACGAAAGGGTGGGCTTCAAGAGTATGTGGAAATGAGGAACCTGATCTTAGACCAATGGTTTAAAGATGTTACTCGTATTCTGCCCCTTTCTGATTGTGGGATCTCAGATACTATCTCAACAGATGGAAAATTGCGTGCTTCCCTTGTCAGAGAGATCTATTCGTTTCTCGATCAGAGTGGTTATATTAATTTTGGTATCGCTTCAGAGAGGGATATATCTGATCCAAGTCACAATAATATGGTTCTCGAAGAAAGAAATAACAAACACGTTACTGATTCTCTAGCTGCTGATGCAGACGATGGGGTTTCATTTATTATCGGGCACATTGAAAGTTCTGAAAAGAATGGTGTGACATTTGATGTGGAAGAGCCACTGGAAGCTACCAGAGGAAGTGAACTCAATTCAGAGATTCCACATGTGAATGAGCTTCATGAACGTAGTCTTGTTGATTGTCCGGAAGGCAGCAGTGTTATTGTAAAAGAATCCAGGACATTAATTAGTGAGAATGTGCTGTGTAGTAATATATCTTGTGATACAATAGATTCCCCCAATCATTACCATCAGTCTGAAACAGAAATTGGAAAGAAAATCATTGTCATAGGAGCTGGTCCTGCCGGATTAACTGCTGCACGACATTTGCAACGTCAGGGCTTTAATGTCACAGTACTTGAAGCCAGGAGCAGATTAGGAGGTCGTGTTCACACTGATCGCAGTACATTTTCAGTTCCTGTCGATCTTGGCGCAAGCATTATTACTGGTGTTGAGGCTGATGTTGCAACTGAAAGAAGACCTGATCCTTCTTCATTGATTTGTGCTCAGTTGGGCCTTGAGTTAACTGTGTTAAACAGTGACTGCCCTCTCTATGATATAGTAACTCGGCAAAAGGTTCCTGCAGATCTGGATGAAGCATTGGAAGCTGAATACAACAGTCTTCTTGATGATATGGTATTACTTGTTGCTCAAAAGGGGGAACATTCTACGAGAATGTCCCTTGAAGAGGGATTAGAATATGCTCTTGAGCAGCGGCGTATGGCACAATTGGGCAGGAATATTGAAGAAGACATGCTTAAAAGTTCTACAGACACCTTATCTACTTGTAAAAATATTTCTGTGAGTAAGTCTGCTAAGGAAGAGATTTTGAGTCCCCTCGAGAGGAGGGTTATGGACTGGCATTTGGCTAACTTGGAGTATGGTTGTGCTACTTTACTCAAGCAAGTATCTCTTCCGCATTGGAATCAGGATGATGTTTATGGAGGTTTTGGAGGAGCTCATTGCATGATCAAAGGGGGCTATAGCACTGTTATTGAGTCTCTTGGAGAAGGACTTAGCATTCGTCTGAACCATTTAGTGACAGATATTTCTTATGATATGGAGAATACTTGCCCAAATGATGATTCTAGTGGGAAAGTGAAGGTTTGCACCTCAAATGGTAGTGTCTTTATCGGAGATGCTGTCTTGGTCACAGTTCCTCTTGGGTGCTTAAAAGCAGAAACCATAAAGTTTTCTCCACCATTACCCCAATGGAAGCAATCTTCCGTTCAACGCCTTGGTTTTGGAGTTCTTAATAAAGTTGTTTTGGAATTTCCCGAAGTTTTCTGGGATGACTCGGTTGATTACTTTGGAGCAACTGCTGTGGAAACAAACTGGAGAGGTCAGTGCTTTATGTTCTGGAATGTTAGGAAAACTGTCGGTGCTCCTGTTCTTATTGCATTAGTTGTCGGTAAGGCTGCTGTAGATGGGCAAAATCTAAGTTCTTCAGTTCACGTAAACCATGCATTAATGGTTCTTCGTAAACTTTTTGGAGAAACTTTGGTGCCTGATCCAGTTGCATCTGTAGTAACTGAGTGGGGGAAGGATCCGTTTAGCTATGGTGCTTATTCATTTGTTGCTGTTGGAGCATCTGGAGAGGATTATGATATTTTGGCCAGGCCTATCGGGAACTGTTTATTTTTTGCTGGTGAAGCTACTTGCAAGGAGCATCCTGACACTGTTGGTGGTGCGATGATGAGTGGTCTTCGGGAGGCAGTGAGGATTATCAATGTACTAAGTAATGGTTATGATTACATTGCAGAAGTTGATGCAATGGAGGCCGCTCAAAGACAATTTAATGGCGAAAAGGATGAATACAAGGACATATTAAGGAGACTTGATGCAGTAGAGCTTTCTAATGACCTGTATCATAATTCGCTTGGCACTGCCACAATCATGTCGAGGGAAGATTTACTAAAGAATATGTTCTTTAATGCTAAAACCATGGCAGGGAGATTGTATCTGGCAAAAGAGTTATTGAATCTTTCTGTTGAAACACTGAAGTCATTTGCCGGGACCAAAGAAGGGCTTACTGTGCTCAATTTGTGGATTCTGGATTCAATGGGGAAAGATGGGACCCAACTCTTGAGGCACTGTGTTCGACTGCTCGTGCTTGTTTCCACTGATCTATTTGCTGTGCGTATATCTGGCATTGGGAAAACTGTCAAAGAAAAGGTTTGTGTACATACAAGCCGTGATATACGTGCCATTGCAAGTCAGTTGGTTAGTGTTTGGCTTGAAGTCTTCCGTAAAGAAAAAGCTTCAAATGGTGGAACAAAATTAAGGCCACCAATGGCGGTTGATTCATCAAAACGAAAGTATCTTAAAGATTCTTCTGGAAAGCCCCCTTTGCATGCCAACTCTGGTGGCCCTGAAGGTAAAGGTGTGTTACAGACGGCTTATTGCAAACCGTTGAAACCAGACGTGGTGAGCAAACCAGAGATCAGCTCATCAAGGTCCAGAGGATCTCTGAGTGATGTGGATGCCGAGGAGGAAGGTGATAATGTTGCCATGTCTGAAGAAGAACAGGCTGCATTTGCTGCTGCTGTAGCAGCCCAGGCTGCACTTGCAGCTGCAGAGGCACGTGCATTTTCAGAAGGCAAGTGCAATACAACGGTGCAACTACCGAAGATACCCTCTTTTCATAAATTTGCCAGACGGGAGCAATACGCTCAGAGAGGTGAATGTGATATTCAGATGAGGTTCTCTGGCAATATTTTGGGAAAACAAGATAGTATATCTGAAATAGACTCAAGAAACTGCAAAGTAAGAAACTGGTCGGTTGATTTCTCGGCTGCTTGTATCAACCAATATAATTCAAGATTATCTGGCGAAAATCTCTCTCCGCAAAGCCATTCCAATGAAATCGTTAGTCAGTTAAACTGTAGGGAACACTCGGGAGAAAGCATGGCTGTGGATAGTAGCATTTATACGAAAGCCTGGGTTGATACATCTGGTAGGGAGGGGATGAAGGATTATCATGATATCGAGAGATGGCAATCTCAAGCAGCTGCAGCCAGTAATAATTTATTCTGGCCCCTTAGGCGTATAAAGGACGAGGAGGAATCAAACACTACTTTAAAGGAAGCACTGTGGAGTGATAAAGTAGCAAATGAAAGCTTAGTTTCACAAGTTACGATGAGTAAGGAGTATGTCAAAGATTATCCCCGTGGAGAAGAGAAAATTAAACAGGCAGTTGTTGATTATGTTGCAACGTTGTTAATGCCTCTTTATAAAACAAAGAAAATTGACAAGGAGGGCTACAAGTCAATAATGAAGAAAAGCGCCACTAAGGTTATGGAGCGGGCTACAGATGCAGAAAAAGCTATGGCTGTTCATGAGTTTCTTGATTTGAAACGTAGGAACAAGATTCGTCCCTTTGTTGACAAATTAATAGAGAGGCACATGGCAATGAATACAGTTGGGAAATAA 4080 42.13 ERRTCPEHAALAPDFVKDDNLSVGLRAARKTKKPKHGDMAYEGDVDWENLTDESDFLENHRAMENDYCSREGRDSGLNIDMDIDNGGAAAISVGLKAHAVGLIEKIRFKEVLKRKGGLQEYVEMRNLILDQWFKDVTRILPLSDCGISDTISTDGKLRASLVREIYSFLDQSGYINFGIASERDISDPSHNNMVLEERNNKHVTDSLAADADDGVSFIIGHIESSEKNGVTFDVEEPLEATRGSELNSEIPHVNELHERSLVDCPEGSSVIVKESRTLISENVLCSNISCDTIDSPNHYHQSETEIGKKIIVIGAGPAGLTAARHLQRQGFNVTVLEARSRLGGRVHTDRSTFSVPVDLGASIITGVEADVATERRPDPSSLICAQLGLELTVLNSDCPLYDIVTRQKVPADLDEALEAEYNSLLDDMVLLVAQKGEHSTRMSLEEGLEYALEQRRMAQLGRNIEEDMLKSSTDTLSTCKNISVSKSAKEEILSPLERRVMDWHLANLEYGCATLLKQVSLPHWNQDDVYGGFGGAHCMIKGGYSTVIESLGEGLSIRLNHLVTDISYDMENTCPNDDSSGKVKVCTSNGSVFIGDAVLVTVPLGCLKAETIKFSPPLPQWKQSSVQRLGFGVLNKVVLEFPEVFWDDSVDYFGATAVETNWRGQCFMFWNVRKTVGAPVLIALVVGKAAVDGQNLSSSVHVNHALMVLRKLFGETLVPDPVASVVTEWGKDPFSYGAYSFVAVGASGEDYDILARPIGNCLFFAGEATCKEHPDTVGGAMMSGLREAVRIINVLSNGYDYIAEVDAMEAAQRQFNGEKDEYKDILRRLDAVELSNDLYHNSLGTATIMSREDLLKNMFFNAKTMAGRLYLAKELLNLSVETLKSFAGTKEGLTVLNLWILDSMGKDGTQLLRHCVRLLVLVSTDLFAVRISGIGKTVKEKVCVHTSRDIRAIASQLVSVWLEVFRKEKASNGGTKLRPPMAVDSSKRKYLKDSSGKPPLHANSGGPEGKGVLQTAYCKPLKPDVVSKPEISSSRSRGSLSDVDAEEEGDNVAMSEEEQAAFAAAVAAQAALAAAEARAFSEGKCNTTVQLPKIPSFHKFARREQYAQRGECDIQMRFSGNILGKQDSISEIDSRNCKVRNWSVDFSAACINQYNSRLSGENLSPQSHSNEIVSQLNCREHSGESMAVDSSIYTKAWVDTSGREGMKDYHDIERWQSQAAAASNNLFWPLRRIKDEEESNTTLKEALWSDKVANESLVSQVTMSKEYVKDYPRGEEKIKQAVVDYVATLLMPLYKTKKIDKEGYKSIMKKSATKVMERATDAEKAMAVHEFLDLKRRNKIRPFVDKLIERHMAMNTVGK 1359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2378671 2384913 + Bpe008204.1 Bpe02g00363 98512

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00363 1359 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 44 1356 - -
Bpe02g00363 1359 Pfam Flavin containing amine oxidoreductase 318 792 IPR002937 GO:0016491
Bpe02g00363 1359 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 889 975 IPR035441 -
Bpe02g00363 1359 Coils Coil 808 828 - -
Bpe02g00363 1359 Pfam SWIRM domain 98 177 IPR007526 GO:0005515
Bpe02g00363 1359 Gene3D - 420 747 - -
Bpe02g00363 1359 ProSiteProfiles SWIRM domain profile. 86 186 IPR007526 GO:0005515
Bpe02g00363 1359 Gene3D - 86 187 IPR036388 -
Bpe02g00363 1359 Gene3D - 310 790 IPR036188 -
Bpe02g00363 1359 SUPERFAMILY FAD/NAD(P)-binding domain 307 795 IPR036188 -
Bpe02g00363 1359 SUPERFAMILY FAD-linked reductases, C-terminal domain 630 741 - -
Bpe02g00363 1359 PANTHER FLAVIN MONOAMINE OXIDASE 44 1356 - -
Bpe02g00363 1359 PRINTS Adrenodoxin reductase family signature 332 345 - -
Bpe02g00363 1359 PRINTS Adrenodoxin reductase family signature 309 331 - -
Bpe02g00363 1359 SUPERFAMILY Homeodomain-like 88 181 IPR009057 -
Bpe02g00363 1359 MobiDBLite consensus disorder prediction 1024 1050 - -
Bpe02g00363 1359 MobiDBLite consensus disorder prediction 972 1010 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00363 - - - zju:107420385 1743.4
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00363 Bpe-Chr2:2378671 Bpe13g01254 Bpe-Chr13:17780257 1.42E-29 dispersed
Bpe05g00169 Bpe-Chr5:5505727 Bpe02g00363 Bpe-Chr2:2378671 4.05E-96 transposed
Bpe05g00298 Bpe-Chr5:16282019 Bpe02g00363 Bpe-Chr2:2378671 1.31E-06 transposed
Bpe14g00054 Bpe-Chr14:881585 Bpe02g00363 Bpe-Chr2:2378671 2.69E-60 transposed
Bpe02g00363 Bpe-Chr2:2378671 Bpe04g00232 Bpe-Chr4:1566093 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1052 Blo01g01586 . . . Bpe02g00363 . Bma04g00234 . Cmo05g00295 Cmo12g00373 . . . Car12g00399 . . Cpe07g00378 Bhi04g00235 . . . Hepe10g0131 . . . . . . . . . Cone4ag1951 Cone7ag1863 . . . . . . . . . . . . . . . . . Cma12g00423 Cma05g00288 Car05g00239 . Cpe11g00239 . . . . . . . . . . . . . . . Lsi08g01341 Csa02g02114 Chy03g01402 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004381 1 2 2 3 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 4 1 1 43
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20863 PF01593 Amino_oxidase 6.70E-108 CL0063 Bpe TR
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe02g00363 Bpe_Chr02 FPKM 17.778017 15.314036 21.530172 23.544851 16.397369 15.090573 18.993618 45.798679 41.68166 41.653671