Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g00365 | ATGAAGATCCAGTGCGATGTCTGCCAAAAGGAGGAGGCCTTACTTTTCTGCACCGCCGACGAGGCCGCCCTCTGCGACGCCTGCGACCACGTCGTCCACCACGCCAATAAACTCGTTTCTAAACACCAACGCTTCTCTCTTCTCCACCCTTCTTCTAACTTTCTACCCATCTGCGATGTCTGTCAGGAAAGAAGAGCTTTCTTGTTTTGTCGACAGGACAGAGCGATTTTATGCAGAGAGTGTGATTTTCCTCTTCACATGGCCAACGAGCATACGCAGAAACACTCTAGATTTCTTCTATCTGGTGTTAAGCTTTCTGCAACTTCCTCCTTCTACTCGTTGCCTTCTTCGTCTAACTCTTCTGCAACCATTGATGATACCGATTCAATGCAAAAGACTCTCGCTCCTCCTCCACCGACAACCTTGCAAAACATGGCCATGGGGTATGATAATTGGGAATACTTGACAGAGACCGTTCCTGGTTGGCAATTCGAAGACCTTCTCCATCCTGTTTATTCTCCTCCTTATGGTCTTTGGAAGGTCATATTTCTGGTTCCACCATTAAGGGGCATTCCAATTTTTTTTTTTTTTTTTGTTCGTTTCCTTGAAGTTAGATTTAAGATCTGCAATTTTAATTACCTTTGA | 645 | 44.96 | MKIQCDVCQKEEALLFCTADEAALCDACDHVVHHANKLVSKHQRFSLLHPSSNFLPICDVCQERRAFLFCRQDRAILCRECDFPLHMANEHTQKHSRFLLSGVKLSATSSFYSLPSSSNSSATIDDTDSMQKTLAPPPPTTLQNMAMGYDNWEYLTETVPGWQFEDLLHPVYSPPYGLWKVIFLVPPLRGIPIFFFFFVRFLEVRFKICNFNYL | 214 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2405816 | 2406544 | - | Bpe008206.1 | Bpe02g00365 | 98514 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g00365 | 214 | SMART | bboxneu5 | 4 | 47 | IPR000315 | GO:0008270 | |
Bpe02g00365 | 214 | SMART | bboxneu5 | 53 | 100 | IPR000315 | GO:0008270 | |
Bpe02g00365 | 214 | ProSiteProfiles | Zinc finger B-box type profile. | 57 | 100 | IPR000315 | GO:0008270 | |
Bpe02g00365 | 214 | Pfam | B-box zinc finger | 4 | 44 | IPR000315 | GO:0008270 | |
Bpe02g00365 | 214 | Pfam | B-box zinc finger | 56 | 96 | IPR000315 | GO:0008270 | |
Bpe02g00365 | 214 | CDD | Bbox1_BBX-like | 57 | 100 | - | - | |
Bpe02g00365 | 214 | MobiDBLite | consensus disorder prediction | 118 | 137 | - | - | |
Bpe02g00365 | 214 | PANTHER | B-BOX ZINC FINGER PROTEIN 22 | 1 | 169 | - | - | |
Bpe02g00365 | 214 | CDD | Bbox1_BBX-like | 5 | 47 | - | - | |
Bpe02g00365 | 214 | Gene3D | Classic Zinc Finger | 1 | 99 | - | - | |
Bpe02g00365 | 214 | ProSiteProfiles | Zinc finger B-box type profile. | 1 | 47 | IPR000315 | GO:0008270 | |
Bpe02g00365 | 214 | PANTHER | B-BOX ZINC FINGER PROTEIN 21 | 1 | 169 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe02g00365 | Bpe05g00126 | CCT | |
Bpe02g00365 | Bpe02g01717 | CCT | |
Bpe02g00365 | Bpe05g00126 | ECH | |
Bpe02g00365 | Bpe02g01717 | ECH | |
Bpe02g01717 | Bpe02g00365 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g00365 | Bpe-Chr2:2405816 | Bpe07g00449 | Bpe-Chr7:6308688 | 4.48E-58 | dispersed | |
Bpe13g00423 | Bpe-Chr13:11855165 | Bpe02g00365 | Bpe-Chr2:2405816 | 4.54E-22 | wgd | |
Bpe15g00849 | Bpe-Chr15:18497243 | Bpe02g00365 | Bpe-Chr2:2405816 | 2.86E-60 | wgd | |
Bpe02g00365 | Bpe-Chr2:2405816 | Bpe02g01717 | Bpe-Chr2:19653960 | 8.09E-61 | wgd | |
Bpe02g00365 | Bpe-Chr2:2405816 | Bpe05g00323 | Bpe-Chr5:16885232 | 1.37E-60 | wgd | |
Bpe02g00365 | Bpe-Chr2:2405816 | Bpe05g00126 | Bpe-Chr5:2779190 | 5.12E-57 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
20864 | PF00643 | zf-B_box | 6.50E-06 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g00365 | - | - | jre:108991312 | 214.927 |