Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00365 ATGAAGATCCAGTGCGATGTCTGCCAAAAGGAGGAGGCCTTACTTTTCTGCACCGCCGACGAGGCCGCCCTCTGCGACGCCTGCGACCACGTCGTCCACCACGCCAATAAACTCGTTTCTAAACACCAACGCTTCTCTCTTCTCCACCCTTCTTCTAACTTTCTACCCATCTGCGATGTCTGTCAGGAAAGAAGAGCTTTCTTGTTTTGTCGACAGGACAGAGCGATTTTATGCAGAGAGTGTGATTTTCCTCTTCACATGGCCAACGAGCATACGCAGAAACACTCTAGATTTCTTCTATCTGGTGTTAAGCTTTCTGCAACTTCCTCCTTCTACTCGTTGCCTTCTTCGTCTAACTCTTCTGCAACCATTGATGATACCGATTCAATGCAAAAGACTCTCGCTCCTCCTCCACCGACAACCTTGCAAAACATGGCCATGGGGTATGATAATTGGGAATACTTGACAGAGACCGTTCCTGGTTGGCAATTCGAAGACCTTCTCCATCCTGTTTATTCTCCTCCTTATGGTCTTTGGAAGGTCATATTTCTGGTTCCACCATTAAGGGGCATTCCAATTTTTTTTTTTTTTTTTGTTCGTTTCCTTGAAGTTAGATTTAAGATCTGCAATTTTAATTACCTTTGA 645 44.96 MKIQCDVCQKEEALLFCTADEAALCDACDHVVHHANKLVSKHQRFSLLHPSSNFLPICDVCQERRAFLFCRQDRAILCRECDFPLHMANEHTQKHSRFLLSGVKLSATSSFYSLPSSSNSSATIDDTDSMQKTLAPPPPTTLQNMAMGYDNWEYLTETVPGWQFEDLLHPVYSPPYGLWKVIFLVPPLRGIPIFFFFFVRFLEVRFKICNFNYL 214
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 2405816 2406544 - Bpe008206.1 Bpe02g00365 98514
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00365 214 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bpe02g00365 214 SMART bboxneu5 53 100 IPR000315 GO:0008270
Bpe02g00365 214 ProSiteProfiles Zinc finger B-box type profile. 57 100 IPR000315 GO:0008270
Bpe02g00365 214 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
Bpe02g00365 214 Pfam B-box zinc finger 56 96 IPR000315 GO:0008270
Bpe02g00365 214 CDD Bbox1_BBX-like 57 100 - -
Bpe02g00365 214 MobiDBLite consensus disorder prediction 118 137 - -
Bpe02g00365 214 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 169 - -
Bpe02g00365 214 CDD Bbox1_BBX-like 5 47 - -
Bpe02g00365 214 Gene3D Classic Zinc Finger 1 99 - -
Bpe02g00365 214 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bpe02g00365 214 PANTHER B-BOX ZINC FINGER PROTEIN 21 1 169 - -
       

Event-related genes


       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00365 Bpe-Chr2:2405816 Bpe07g00449 Bpe-Chr7:6308688 4.48E-58 dispersed
Bpe13g00423 Bpe-Chr13:11855165 Bpe02g00365 Bpe-Chr2:2405816 4.54E-22 wgd
Bpe15g00849 Bpe-Chr15:18497243 Bpe02g00365 Bpe-Chr2:2405816 2.86E-60 wgd
Bpe02g00365 Bpe-Chr2:2405816 Bpe02g01717 Bpe-Chr2:19653960 8.09E-61 wgd
Bpe02g00365 Bpe-Chr2:2405816 Bpe05g00323 Bpe-Chr5:16885232 1.37E-60 wgd
Bpe02g00365 Bpe-Chr2:2405816 Bpe05g00126 Bpe-Chr5:2779190 5.12E-57 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20864 PF00643 zf-B_box 6.50E-06 No_clan Bpe TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00365 - - jre:108991312 214.927