Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00367 ATGGCGAGGGGGAAGATTCAGATCAAGAGGATAGAGAATCCAACCAACATGCAGGTCACCTTCTCTAAAAGACGAAAAGGATTGTTCAAGAAGGCAGAGGAGCTCTCTGTTCTCTGCGATGCTCAGGTTTCCATTATTATGTTTTCTGGCACCGGCAGACTCCATGAATATTCCAGCTCCACCACCACGACGAAGGAGTTACTCGATCGTTACCAGAGGGCATTAAATGTTGATATTTGGAACTCGCATTATGAGAGAATGCAAGAGAGTCTGAAGAAGCTGAAAGAAGTCAACTGGACTCTCCGAACGCAGATAAGGCAAAGGGTTGGCCAATGTCTCAACGATCTGAACTTCGAAGAACTGCTTCGTCTTGAACAAGATATGGAAGATGGTGTCAAGTCTATTCGGGAGCGCAAGTTCAAGGTGCTGGACACTGAGTGCAATAAACACAGGAAAAAGTTCAAGAACGAGGGAGATGTACACAGAAGCATTCTCCAGGAATTTGAGGTGGCAATGGAGGAAGATCCACAGTATGGAGGGGTTGAGGTCGACGGCGGAGGAGGTTACGGCTCCATTGTTGGATTCTCAAACGGAGGTCCACATTTATTTGCACTCCGGCTGCAACACAACCAGCTTCATCTGGCCGGAGCCGGATCGGATCGGAGAACTTATCCCTTGCTCGAGTAG 687 48.03 MARGKIQIKRIENPTNMQVTFSKRRKGLFKKAEELSVLCDAQVSIIMFSGTGRLHEYSSSTTTTKELLDRYQRALNVDIWNSHYERMQESLKKLKEVNWTLRTQIRQRVGQCLNDLNFEELLRLEQDMEDGVKSIRERKFKVLDTECNKHRKKFKNEGDVHRSILQEFEVAMEEDPQYGGVEVDGGGGYGSIVGFSNGGPHLFALRLQHNQLHLAGAGSDRRTYPLLE 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2414262 2415975 - Bpe008208.1 Bpe02g00367 98516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00367 228 CDD MADS_MEF2_like 2 80 IPR033896 GO:0000977|GO:0045944
Bpe02g00367 228 SUPERFAMILY SRF-like 3 95 IPR036879 GO:0003677|GO:0046983
Bpe02g00367 228 Pfam K-box region 82 166 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bpe02g00367 228 PANTHER APETALA3 1 225 - -
Bpe02g00367 228 Gene3D - 13 83 IPR036879 GO:0003677|GO:0046983
Bpe02g00367 228 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bpe02g00367 228 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bpe02g00367 228 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bpe02g00367 228 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bpe02g00367 228 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bpe02g00367 228 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bpe02g00367 228 ProSiteProfiles K-box domain profile. 84 174 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bpe02g00367 228 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 225 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00367 Bpe04g00229 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00367 Bpe-Chr2:2414262 Bpe02g00630 Bpe-Chr2:4110782 4.62E-40 dispersed
Bpe10g00142 Bpe-Chr10:2896564 Bpe02g00367 Bpe-Chr2:2414262 1.31E-70 wgd
Bpe02g00367 Bpe-Chr2:2414262 Bpe04g00229 Bpe-Chr4:1552256 7.04E-120 wgd
Bpe02g00367 Bpe-Chr2:2414262 Bpe06g00030 Bpe-Chr6:367437 1.82E-60 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20865 PF01486 K-box 2.30E-16 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00367 K09264 - csv:101218008 272.707