Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00368 ATGGCAGGCTTCTTCTATCTAGGTGGAAGAGAAGGCCCACCAAGCAAACAAGAAGACGATCAAGCTGAGAGGGAGCAGAACTTGTTTTTATACAGAAACGAGGAGATCTATAACAAGGGTTTCGAGATATGGCCTCAGTACAGTCATCAACAACAACAAAACCAAAGCTTGAACAGCAACCTGTCGTTCGGAGTGGGTCCTGGCCACCGAAGAAGCTTCATCAACGTTTCCGATGATCCGTCCAGGTTGCGATTCACCGTGAGTAGACAAGGAGGGCCGGTTGGAGGAATGAATTGTCAAGACTGTGGAAATCAGGCTAAGAAAGATTGCTCCCATCTTAGGTGTAGAACTTGCTGTAAGAGTCGAGGGTTTCAGTGTCAAACCCACGTCAAGAGCACGTGGGTTCCGGCGTCCAAACGCCGCGAAAGACAGCAACAACTCTTGGCTTCGAATTCTCAGCAAGAACTACAATTTCCGAAAAGGCAGAGGGAAAATCAAGGACTCTCCTCTTCTCTTGCCTGGTTAGAGCTGGCACAATTTCCAGCGGAAGTGAATTCTGCAGCAGTTTTTCGGTGTGTGAAAGTGAGCGCTATGGATGATGTGGATGACCAGTTAGCTTATCAGACGGCTGTAAATATCGGAGGACATGTTTTTAAGGGAATTCTGTACGATCAAGGACCGGAAGGAAGCTATTCTGCAGGAGGGGACAGCTCTTCCGGCCACGGCGGAGAGGGAATCCAGCAACTCAATCTCATAACCGGAATGATCGGAAACACGTCCGCAGTTTCCGCCACTATAGCTGCCACTTCTAACCCATCTGCTTGTTTGGTCGATTCTTCAATATATCCTCCGTTCAATGCTTTCATGGCTGGTACGCAATTCTTCCCTTCTTCAAGGTCATAA 903 48.17 MAGFFYLGGREGPPSKQEDDQAEREQNLFLYRNEEIYNKGFEIWPQYSHQQQQNQSLNSNLSFGVGPGHRRSFINVSDDPSRLRFTVSRQGGPVGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPASKRRERQQQLLASNSQQELQFPKRQRENQGLSSSLAWLELAQFPAEVNSAAVFRCVKVSAMDDVDDQLAYQTAVNIGGHVFKGILYDQGPEGSYSAGGDSSSGHGGEGIQQLNLITGMIGNTSAVSATIAATSNPSACLVDSSIYPPFNAFMAGTQFFPSSRS 300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2420906 2422061 + Bpe008209.1 Bpe02g00368 98517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00368 300 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 297 IPR007818 GO:0003700|GO:0006355
Bpe02g00368 300 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 98 140 IPR006510 -
Bpe02g00368 300 Pfam Domain of unknown function (DUF702) 96 228 - -
Bpe02g00368 300 PANTHER PROTEIN SHI RELATED SEQUENCE 7 1 297 - -
Bpe02g00368 300 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 179 227 IPR006511 -
Bpe02g00368 300 MobiDBLite consensus disorder prediction 1 23 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00368 Bpe05g00123 CCT
Bpe02g00368 Bpe02g01715 CCT
Bpe02g01715 Bpe02g00368 ECH
Bpe02g00368 Bpe05g00123 ECH
Bpe02g00368 Bpe02g01715 ECH
Bpe02g00368 Bpe04g00228 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00368 Bpe-Chr2:2420906 Bpe11g00939 Bpe-Chr11:6952178 4.26E-46 dispersed
Bpe10g00138 Bpe-Chr10:2605842 Bpe02g00368 Bpe-Chr2:2420906 3.08E-78 wgd
Bpe02g00368 Bpe-Chr2:2420906 Bpe02g01715 Bpe-Chr2:19629997 2.50E-114 wgd
Bpe02g00368 Bpe-Chr2:2420906 Bpe04g00228 Bpe-Chr4:1542559 1.25E-168 wgd
Bpe02g00368 Bpe-Chr2:2420906 Bpe05g00123 Bpe-Chr5:2598777 2.53E-122 wgd
Bpe02g00368 Bpe-Chr2:2420906 Bpe06g00032 Bpe-Chr6:385485 8.89E-79 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20866 PF05142 DUF702 3.30E-62 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00368 - - cmo:103488016 369.777