Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00370 ATGGAAGTCGGGGAGAAAGGTAGACGGGCGAAGAAGATGGCCCAGGCCAGCTCCAGAAAGGGTTGCATGAGAGGTAAAGGCGGGCCTGAAAATTCTATGTGTACTTATAAAGGCGTTAGGCAGCGAACTTGGGGCAAATGGGTGGCCGAAATTCGCGAGCCTAACCGTGGTGCTCGCCTCTGGCTCGGCACCTTCGATACGTCTCACGAAGCAGCTATGGCCTACGACGCTGCTGCCAGAAAGCTCTACGGATCCGACGCTAAGCTGAACCTTCCTGCAGATTTTCGTAGCTCTAACCAAATAATTATTCAAACGGGAAACCAACCTATCACAGATGAATCCCAGCAAGTGCAAAAGAAAGAGGGAGAGAACAAAGAAGAGAGGCCGTGGGGGAGTTTTGATGAATCCATGTGGACAGAGGCAGCCATGTCTTTAGATTTTCCAGCCATTGAAGAGCATGGAGTTTTCTCTACCACCTGGATAGACGAAGCAAATGGATGGGAGACGTTTCAGTATTGCTTATAG 525 50.1 MEVGEKGRRAKKMAQASSRKGCMRGKGGPENSMCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHEAAMAYDAAARKLYGSDAKLNLPADFRSSNQIIIQTGNQPITDESQQVQKKEGENKEERPWGSFDESMWTEAAMSLDFPAIEEHGVFSTTWIDEANGWETFQYCL 174
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2433806 2434330 - Bpe008211.1 Bpe02g00370 98519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00370 174 MobiDBLite consensus disorder prediction 1 30 - -
Bpe02g00370 174 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2D 10 116 - -
Bpe02g00370 174 PRINTS Ethylene responsive element binding protein signature 36 47 IPR001471 GO:0003700|GO:0006355
Bpe02g00370 174 PRINTS Ethylene responsive element binding protein signature 58 74 IPR001471 GO:0003700|GO:0006355
Bpe02g00370 174 SUPERFAMILY DNA-binding domain 35 93 IPR016177 GO:0003677
Bpe02g00370 174 MobiDBLite consensus disorder prediction 107 130 - -
Bpe02g00370 174 ProSiteProfiles AP2/ERF domain profile. 35 92 IPR001471 GO:0003700|GO:0006355
Bpe02g00370 174 SMART rav1_2 35 98 IPR001471 GO:0003700|GO:0006355
Bpe02g00370 174 MobiDBLite consensus disorder prediction 116 130 - -
Bpe02g00370 174 Pfam AP2 domain 35 84 IPR001471 GO:0003700|GO:0006355
Bpe02g00370 174 CDD AP2 34 94 IPR001471 GO:0003700|GO:0006355
Bpe02g00370 174 Gene3D AP2/ERF domain 35 93 IPR036955 GO:0003700|GO:0006355
Bpe02g00370 174 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 10 116 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00370 Bpe05g00118 CCT
Bpe02g00370 Bpe04g00227 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00370 Bpe-Chr2:2433806 Bpe03g01125 Bpe-Chr3:30318381 7.40E-35 dispersed
Bpe02g00370 Bpe-Chr2:2433806 Bpe04g00227 Bpe-Chr4:1534337 1.40E-86 wgd
Bpe02g00370 Bpe-Chr2:2433806 Bpe05g00118 Bpe-Chr5:2391279 2.86E-50 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20867 PF00847 AP2 7.10E-16 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00370 - - cmos:111454192 202.601