Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00372 ATGATGGATACGTATTTTCCGAGCATGAACAATCAAAGAAATGCTGTAATAACTCCATATATGGAAGACCCAAAAATCAATTCTTTTTCAGAAATGCCTTTCTGCTCTAATACTTTGGTGATGGGCCTGAATCAAGGTCCTGCCCATGGATTTTACTCGAGCTCTTCCAACTGTGTAGATAGTATGGAGGGCAGATATGAAATGGCCTTTCTTCCACAATTTGGACATTCATTAGGCATCCAAGACTTTGCTTCAGAGCTAGAAACTGAAAAAATTGATCAGCTGGGAATTCCAAATGGTGGAAAGAATAGTCAGTGTGGGGGATTATCGCTCAGCCTCGGCTCGAAGATATCATTTTCTGGTGGAAATCGAAGTGCTGCAGAAATGGAGACTTTTCCAAATTCTTCTGGCTTGGTCACCCTCGGCAGAATGAACTCCCATGTTTATGATCCATATGAAGCTTCGGTTCTGGCTAACACTGGCTTAAACTCAAAATATGTCAAGGCAACTCAACAATTGCTTGATGAAGTGGTGAATATAAGAGCGGCCTTGAATGGGATCAGATCTAATAAACATAAAAGCTTCGTTAATAGCTTGAACAATAACAATGGCGGATCTAGTGGTCGATCTTTGGATATGTCTTCTAGTTATGGCGCATCGACAACCAACCCCTCTTTTGAACTCTCGTCTGTAGAGCGGCAGGACTTGAAGAACAGAAGTGCTAAGCTTTTGTCCATGGTTGAAGAGGTCGATGAAAGATATAGGCAATACTATCATCAGATGCAAATAATGGTGTCATCTTTTGATATGATAGCTGGTTGTGGGGCTGCAGAATTATATACAGCACTAGCTCATCAAACCATTTCACGCCATTTTCGACGTTTACGAGACGGAATCAGTGACCAGATTCAGGTAATGAGGAGAAATTTGGGAGAAGAAGATTGTTCATCAGCTGGTCAGAGGGGAATTCCTCGCCTACGCTATGTCGATCAGCAGCTCAGACAACACAGAGCTCTTCAACAACTTGGTCTCACCCGACATTCTTGGAGGCCTCAAAGGGGGCTTCCAGAGAGCTCTGTCTCGATCCTTCGTGCTTGGCTGTTCGAACATTTCCTTCATCCCTATCCGAAAGATACTGAGAAACTCATGCTCGCAAGGCAGACGGGATTGACACGAAATCAGGTGGCAAACTGGTTCATAAATGCACGTGTGCGCCTTTGGAAGCCCATGGTGGAGGAGATGTACAAAGAGGAGTTTGGTGATCCGACGATGGACTTCAACTTTTCACCAGAAAACACTTCCGCAGCTCCCAGAAATTGTTCGTTCCCGTTCGAAGACGGGGACGAAGATTTGCAGGGCAGTGTAATATCATCAAATGCGGATGGCGAGCAAATTCAAGAGTCGAATTCAAATGAAATTTCTGGTATGGAAATGAAGGAAAACGCAAGCAAAATAGGAGTTGAAAGCCTTGGAAATGCAGAGAATATTCCCAATCACCCTCTTTATCCGCACAATATGATCTTATCGAACCGAGTCTCGCTTGCGTTGGAGCTTGGAGCTGAGGCATTGCGAAAAAAATGA 1581 43.9 MMDTYFPSMNNQRNAVITPYMEDPKINSFSEMPFCSNTLVMGLNQGPAHGFYSSSSNCVDSMEGRYEMAFLPQFGHSLGIQDFASELETEKIDQLGIPNGGKNSQCGGLSLSLGSKISFSGGNRSAAEMETFPNSSGLVTLGRMNSHVYDPYEASVLANTGLNSKYVKATQQLLDEVVNIRAALNGIRSNKHKSFVNSLNNNNGGSSGRSLDMSSSYGASTTNPSFELSSVERQDLKNRSAKLLSMVEEVDERYRQYYHQMQIMVSSFDMIAGCGAAELYTALAHQTISRHFRRLRDGISDQIQVMRRNLGEEDCSSAGQRGIPRLRYVDQQLRQHRALQQLGLTRHSWRPQRGLPESSVSILRAWLFEHFLHPYPKDTEKLMLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEEFGDPTMDFNFSPENTSAAPRNCSFPFEDGDEDLQGSVISSNADGEQIQESNSNEISGMEMKENASKIGVESLGNAENIPNHPLYPHNMILSNRVSLALELGAEALRKK 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2450902 2453134 + Bpe008213.1 Bpe02g00372 98521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00372 526 SMART prehox3 155 301 IPR006563 -
Bpe02g00372 526 CDD homeodomain 349 410 IPR001356 GO:0003677
Bpe02g00372 526 SUPERFAMILY Homeodomain-like 350 417 IPR009057 -
Bpe02g00372 526 Pfam Homeobox KN domain 366 405 IPR008422 GO:0003677|GO:0006355
Bpe02g00372 526 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 10 132 519 - -
Bpe02g00372 526 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 132 519 - -
Bpe02g00372 526 SMART HOX_1 349 413 IPR001356 GO:0003677
Bpe02g00372 526 Coils Coil 233 253 - -
Bpe02g00372 526 Pfam Associated with HOX 163 300 IPR006563 -
Bpe02g00372 526 Gene3D - 345 422 - -
Bpe02g00372 526 MobiDBLite consensus disorder prediction 198 225 - -
Bpe02g00372 526 ProSiteProfiles 'Homeobox' domain profile. 346 409 IPR001356 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00372 Bpe-Chr2:2450902 Bpe04g00620 Bpe-Chr4:3964303 5.25E-91 dispersed
Bpe02g00372 Bpe-Chr2:2450902 Bpe02g01709 Bpe-Chr2:19581890 1.05E-66 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20868 PF07526 POX 3.40E-44 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00372 - - qlo:115974406 461.07