Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00385 ATGCCATTCAAAAGTGTAGTTCGTGAAATAAGAGAGAGTATTGGAAACCTAAGAAGAAAAAGGGAAGAAGGAAGACCTTTACGCCATCCAGGAAAATCACATATAGCACCGGAGCAGCCTCCATGTTCATCATCGCCTTCTTTGATTCCACAGAGCCGATGGGCGAGTTTGCCTGCCGAGTTGATTCTGGACATAATTCAAAGAGTCGAATCAAGCGAAACCTCCTGGCCTGGCCGGAGAGATGTTGTTGCTTGTGCTTCAGTTTGTAAATCATGGAGGGAGATTGCTAAAGGAGTTGTTAAAACCCCCGAGAAGTGTGGCTTACTGACCTTTCCTATCTCCCTCAAACAGCCGGGACCAAGAGAGACGCCAATCCAGTGCTTTATAAGGAGGGACAGATCAACCTCAACATATCGACTCTATCTCGGTCTAAGTCCGGATTGTAAATTGTCGGCTACTTATGGTCTCGATGGTTATAGATTTTCAATTGACACTTTATTTATGATTAGATCCAATTTCATGGGAACAAAGTTTTCAATATACGACAGTCAACCTCCACTGGATCCGCCTATGCAAACAACTTCTAGTTCGCAACGAAGAGGCCATTTAAAGCGGGTGTCACCGAGAGTAACCATTGGAGACTATAATGTTTCATCCATATCTTACGAGCTCAATGTCCTTCGAACCAGAGGTCCGAGGAGAATGCAGTGCACCATGAATTCAATACCAGTTTCATCCATTCAAGAAGGCGGCACAGCCCCTACTCCAACTGAATTTATCAAATGTCTCAACGAGAAACAAGATCCTCCACTGGCAGTAGCCAAGAAAAAGAAGCATCAAGTCGATATTAGTTTCAGTGGTCTATCCGAGCCTCTCATCCCTGTTCATTCTGCACTTGTTCTGAAAAATAAATCTCCGAGATGGCATGAGCAGCTCCAGTGTTGGTGCCTAAACTTCAGAGGACGGGTAACAGTCGCTTCCGTAAAAAATTTCCAGCTTGTGGCATCTGCTGATGATGTGCGCCAAAATATTTCTGCTGCTGAGCAGGAAAAAGTGATTCTTCAATTTGGTAAAATCGGGAAAAACATATTCACCATGGATTACCGATATCCTCTATCCACATTCCAAGCCTTTGCAATCTGCTTGAGCAGCTTCGACACTAAACCTGCCTGTGAATGA 1179 44.27 MPFKSVVREIRESIGNLRRKREEGRPLRHPGKSHIAPEQPPCSSSPSLIPQSRWASLPAELILDIIQRVESSETSWPGRRDVVACASVCKSWREIAKGVVKTPEKCGLLTFPISLKQPGPRETPIQCFIRRDRSTSTYRLYLGLSPDCKLSATYGLDGYRFSIDTLFMIRSNFMGTKFSIYDSQPPLDPPMQTTSSSQRRGHLKRVSPRVTIGDYNVSSISYELNVLRTRGPRRMQCTMNSIPVSSIQEGGTAPTPTEFIKCLNEKQDPPLAVAKKKKHQVDISFSGLSEPLIPVHSALVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQLVASADDVRQNISAAEQEKVILQFGKIGKNIFTMDYRYPLSTFQAFAICLSSFDTKPACE 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2514648 2516231 + Bpe008226.1 Bpe02g00385 98534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00385 392 SUPERFAMILY F-box domain 49 97 IPR036047 GO:0005515
Bpe02g00385 392 PANTHER TUBBY-LIKE F-BOX PROTEIN 167 392 - -
Bpe02g00385 392 PANTHER TUBBY-RELATED 167 392 - -
Bpe02g00385 392 PANTHER TUBBY-RELATED 1 149 - -
Bpe02g00385 392 MobiDBLite consensus disorder prediction 184 204 - -
Bpe02g00385 392 Pfam Tub family 168 387 IPR000007 -
Bpe02g00385 392 Pfam Tub family 115 146 IPR000007 -
Bpe02g00385 392 ProSitePatterns Tub family signature 2. 377 392 IPR018066 -
Bpe02g00385 392 ProSitePatterns Tub family signature 1. 319 332 IPR018066 -
Bpe02g00385 392 Gene3D - 49 99 - -
Bpe02g00385 392 Pfam F-box domain 54 100 IPR001810 GO:0005515
Bpe02g00385 392 PRINTS Tubby superfamily signature 319 335 IPR000007 -
Bpe02g00385 392 PRINTS Tubby superfamily signature 165 189 IPR000007 -
Bpe02g00385 392 PRINTS Tubby superfamily signature 214 241 IPR000007 -
Bpe02g00385 392 PRINTS Tubby superfamily signature 370 392 IPR000007 -
Bpe02g00385 392 PRINTS Tubby superfamily signature 349 368 IPR000007 -
Bpe02g00385 392 PRINTS Tubby superfamily signature 301 318 IPR000007 -
Bpe02g00385 392 Gene3D Tubby Protein; Chain A 112 392 IPR025659 -
Bpe02g00385 392 MobiDBLite consensus disorder prediction 186 201 - -
Bpe02g00385 392 MobiDBLite consensus disorder prediction 18 47 - -
Bpe02g00385 392 MobiDBLite consensus disorder prediction 18 32 - -
Bpe02g00385 392 PANTHER TUBBY-LIKE F-BOX PROTEIN 1 149 - -
Bpe02g00385 392 SUPERFAMILY Tubby C-terminal domain-like 103 392 IPR025659 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00385 Bpe04g00217 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00385 Bpe-Chr2:2514648 Bpe04g00353 Bpe-Chr4:2239597 7.12E-130 dispersed
Bpe02g00385 Bpe-Chr2:2514648 Bpe04g00217 Bpe-Chr4:1476882 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20869 PF01167 Tub 6.80E-76 CL0395 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00385 K19600 - csv:101222500 508.064