Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00397 ATGTTTAACGTAGATTTTCAAGGGTCTGGCAATTTAATTCCGCTGTCACCTCAGTGGCTACTGCCTAAGGCAGGAGAAGCTAAGGGAATAGAGGAAACCAATTGCAACCTCCAACCAGTGAATGGAAACCTCTCCGATACGCTAAAGGCATCAAGAATTGTGGAGGTGATGCATGATATGCCAATGAAAAAGAATGTTTTTAGGCCATCCGTCCTTGATGTGGAGGCTTATAAGCGTGACCGTTGGCGTGATGAGGAAAGAGACACCAATTCTTCATTGCGCAAAGATCATTGGAAGGATGGAGAAAAGGATTTTGGTGACAATCGCAGGGCAGATCGCCGGATAGAAAATTCTTCCAATAGAAATTTTGGGGAATCTCGCCGTGTTCCCTCTGACAGGCGGATGGACTCTAGTAACTTAGATGGTAATTTTGATCAACGGCGAGAAAGCAAATGGAATACCCGTTGGGGACCTGATGACAAAGAACCAGAAGGCTTGCGTGAGAAGTGGGTGGACTCTGAGAAAGATGGTGACTTACTCCATGATAATGGTTCCTCTCATGGTATCAGTCATGGAAAAGATGACAGGGAGGGAAATCAATATCGTCCATGGAGATCGGCTTCCTCTCAAAGCCGAGGAAGGGGAGGACCTCACCAGTCAATAACACCAAGTAAACAAGTTTCTACATTTTCATACGGACGTGGGCGTGGAGAAAATACACCTCCAACCTTTTCAGTCAGTCGTGGCAGGATGGGTTCCATTGGTGGCTCTAACTATTCTAATCTTATTCATTCTATTCCTTTTGGTTCTCTGGGGGATAAATTTGAAGGCGGCCAGGATGAGCCTTATACATTAAAGTATGCTAGGACAAAGTTACTTGATGTGTACAGAACAACTGAAGTGAGATCATGTCAAAGTGTACCTGATGGATTTGTTCCTGTGCCTTCTCTAACATTAGAAGAACCATTAGAACCTCTGGCACTTTGCGTACCAGATCGCGAGGAAATGGTTGTTCTGAATGGAATTGATATAGGTGATGTTATAAGTAGTGGTGCGCCTCAAATAGCAAAGGATGGGCGAAATTCATTAGATATGGGGCAGGCAAGACAAAACAAGCTAGTTGCTAGAGAAGATTTACCTCAGGATCTCAATGAAAACAAAGAGGAAGGTTCTGAGGGCACAAAAGTTAGTTCGATAAATTTCTCAGATGGGCCTTATGAAAGACAGATGCAATTTCACGGGTCTCAATTGAAAATGGAAGCCTCTCAAGATTGCAAGATTAGTGCTGGAAATAAGCTCAAAACAGAAGCTTCCAGGGAAGATGGTAATTACACACAGGCAGATGAGATTCAAAGTAGTAAGGAATTAAGTTTTCGAAAGAATATATCAGTTCATCCTGGTGCTTCATGGAAAACCTTGTCAATAGGAGAAAACAATCATCCATCTGTGCCTGATTGGATAGAAAATCCAAATGATGTCAGCTTTAGGACCCCTGAGAGATTATTACAATCATCGAAGCATCTTATTAATGAATTGGGAAACAGTTTACCAAATCAATTGTACACCAAAGACAACATTAGATGTCAAATTGCTAATGATCCTATTATTAGAAGGCAGCTATCTGGAATTTTTGGTGAAGAACAGCGATTAAGGAAACCTATACAGTCTTCTCCTGAGGATCTTTCGCTTTATTATCAAGATCCATCTGGTGTAATTCAAGGGCCTTTCACTGGGATTGATATTATTGGGTGGTTTGAGGCTGGGTATTTTGGCCTGGATTTACTTGTTCGTCAGGAAAATGCTCCTAGTGATTCACCATTTTCTTCACTTGGTGATGTCATGCCCCACTTGCGAGCCAAAGCCAAGCCACCACCTGGTTTTGGTGGACCCAAGCAAATTGAAATCGTGGATGCATCAACTAACCTAAGCTCCAGTGGGTTTGCACAGTGCCACTCTGGTCTGAGCAATAAGGAGCTGGTAAGAAATGAGACCAGGCATAAACATGGCTCAGCGACAGAAGCCGAAAATAAGTTTTTGGAGTCGCTGATTTCTGCTAATTTAAGCAGTTCTTCTTTTGAGAATTCTTCTTTTTCAGAAGGAATGCCAATACAGTTTGGAAATACTTCTCATAATTTACCCGTGAGTGGAGTAGATGGAGGAAATGACCCGAGCCTTATTGCTAAAAGAATGGCAATGGACAGGCAGAAGTCGCTGCCTAATATATATCAGTATTGGCAAGGCAGAGATGCAGCATCAATGATCTCCAAGTCAGAACCTTTTCAAGATTCCCATCAACCGCTGTCAAAACTTCTAACCCCAATTTTGGACAATCCTCGCCAGACTCCTTATTCCCAGAATGTTGACATGATGTCTATGCTCCATGGCATACCAGATGGATCATCATCTGGAATTAATAATGTGGCCGGCACTTGGTCAAGTTTTACTGGCCAATGTGTGTCTGATGCACTCCAGGGTAAGATTGACATGCAACATGATCAGAATTTACCTACTTCGGCAGCATTTGGGCTTCAGCAACAAAGGTTTCAACTTCAGAACCCGCCATCTTTCACTAATCAACTTCCTCGAGCTATTGAAAATCCATCTGTGGTTGCAGCACCAGAAAAGATAATTTCTTCAAATTTATCTCAAGAACAACAGCTGTTAAATATTTTGCACCAGCAACAGTTACTTCCATCCAATTTACCGCAAGATCCACAGGTGTTAAATATGTTGCAACAGCAATACTTATTGCAGCTGTATTCACAGGCACCTGCTCCTACTCAACAGATTTCATTGTTGGATAAACTGTTGTTACTTACTCAGCAACAGAAACAGGAGCAGCAGCTACAGCTATTACGTCAACAACAGTTGCTCTCTCATGTTCTGTCAGCGCAACAATCCCACCAACGCATTGCGGATCCATCTTATGGTCAGGTAAACGCCTCCTCTTTGCAAATACAGAATGCATTTACCGATCCGTCTCGGATTCAGTCATCACCAGAGATGCTTCATGATAGTTCCCAACTTCCTATTTTGAGTGTGCAAGGGGAGCATGTTACTAACTTTGGGGATAGGCTGTTGCAAGTTACCCTGGATGTCACTGCTAATGTTAGTGTGGAAGGTTCCTCCGTTGCACTTCCCCATCAAATATTTGGTACACAGCAGGGAAGTATGAATGTCGTCTTTTCAGAACAGGCAAATGATATCCTCTTAAAGGAGTTGTTGGCTGTACCGAAAATGTGTGAGAGTTCATCTTTGCCAAATATTATGAGCAGGTCAATGGAACACGCTGATCTTATTGACAAGGATGTTTCTGCCTGTGAAATTAATACTCCTAAAAGTATAGATCACAGTACAACACTAACTTTAGATGTGGATGGAGCTCTCACGCGTTTGGCAGCGGAGGCTGGTATAGATTCTGAACTTTTTGAGAGTGATAAAGCCTTTGTTGGGTTATCATCAGGAGCAAAGGGTGGAATTTCTGTGACTAATCCTGCCTGTGAGGTGAAGATGAATCTGGAAAGTGCGTATGGAAAGCTAGAGGTGGAGAGGGATGTATGCAGTCATGGATCTTCTAATCAAGAAGTGGAAAATGTTGAAATTTGCGAACCAGGAAAAGTTTCTGAAAAGAAATCTAAAAAACAAAAATCTTTGAAGTTACAACCCAACTCTGATCAAGGGAAGGGGATAGCCAAAAGTATACAGGATTGCAAGCTGCCTGAAAGCAGCAAGCCAGAGTCTGGTCAGTTAAATTTGGTCTCAGACAAAGGCGCAGAACAGTCGCTGCTTCGACAGGAATCAGGAAATGAAAGCAAGAAAATTATTTCTTCAGAGGCTGTGGATCCCCCACCAATTCAAAGTTCAATGCCTGGAAACTTTTCCGGAAATGGTGTTGAAACAGTTGGAATCAAGAGTGACACGAGAAGCAGCCAATTACAGACTGGACAAAGAGCTTGGAACGCAGCTCCTGGTTTCAAAGCAAGGTCGTTATTGGAGATTCAGGAGGAAGAACAGAAAAAAGCACAGACTGAACTGGTGGTATCTGAGATTGCTACTTCTGTAAAGTCCATCAGTTTGTCAACTTCTTGGACTGGGATTGTTGGCAATATTGGAGAAACTAAAAAAAGTTCTGGGAGACAAGAAGCTTCTATAAATTCAAAGGTTAAGAAAAGTCAGTTACATGACCTTTTGGATGAAGAAGTTTTCCCCAAGTTTAGTGAAGGGGATAGTCAAGTTTCTGACTCCATGTACAGTTCATCTTCTATGGTAGCAATGAGCAAGAATTCAGAATCTATGGATGATGACAAATTTATCGAGGCTAAAGAAACTAGAAAGAGCCGGAAGAAGGCTGCAAAAGCAAAGGGGGTTGGAACCAAGGCCTCGTTACCTGTCACTTCTGTTGATATACCTACTGGTTCAAGTCCCATAGAGAAAGTGAAAAGTTCGCATCATCTTCCACAGGAAAAGGAAGTTACACCCACAATCCCATCCGGACCTTCTTTGAGTGATTTTGTTTTTTGGAAGGGGGAAGAGTCAGCAAACTCATCCCTTACCCCAGTCTGGTCTACTGACTCTGGGAAGGTGTCTAAGCCCACATCTTTAAGAGACATACAAAAGGAACAGGAACGAAGGATCTCCTCTCAGCATCCATCCCAAATGCCTACTCCCCAAAAATCCCAGCCAACTCAAATTTCCCGTAGTAATGTTCCTTCGTGGTCAGTTTCTGCATCATCTCCATCGAAGGTTGCTTCCCCGATTTCAATTTATTCTCGCCCATCCTCTCAGTCAAAAAATAAAGGGGACGAAGACTTGTTTTGGGGACCAGCTGATAATTTGAAGCAAGAAACGCAGCAGGCCAACTTCCCGCAACTCACGACTCAGATTAGCTGGGAAACAATACCTACTACGGGAAAAGTAACTTCAGTTGGATCACTAGGCAGACAAAAATCATTGATTGGCAAAGCTTCTGAGATCACTCTGTCTACCTCAACCTCTGTTCGGTCATCTTTTAGAGGAAAGAGAGATGCTAGGACCAACCATTCAGAAGCCATCGATTTCAGAGATTGGTGTGAGAGTGAATGCATTCGACTCATTGGGTCAAAAGATACTAGTTTTCTAGAGTTCTGCTTGAAGCAATCCAGATCAGAGGCGGAGCTGCTTTTGACAGAGAACCTGGGGTCGTATGATCCTGATCACAAATTCATTGATAAATTCCTCAACTACAAGGAGCTGCTATCAGCTGACGTCCTGGAAACTGCATTTCAAACTCGGAATGATCTGAAGGCAAGTGGCTTCGGTGCCAAAGATGGGAATTCTAAGTATGCAAATTCAGGCGATGTTGATGGAAACTCCACCATCACACCAGACGGAACATCCAAGGGAGGAAGTAAAAAGAAAGGGAAGAAAGGGAAGAAGGTTAGTGCATCGATTTTGGGATTTAATGTTGTCAGTAACAGAATCATGATGGGTGAGATTCAGAGCGTGGAAGATTAG 5493 42.82 MFNVDFQGSGNLIPLSPQWLLPKAGEAKGIEETNCNLQPVNGNLSDTLKASRIVEVMHDMPMKKNVFRPSVLDVEAYKRDRWRDEERDTNSSLRKDHWKDGEKDFGDNRRADRRIENSSNRNFGESRRVPSDRRMDSSNLDGNFDQRRESKWNTRWGPDDKEPEGLREKWVDSEKDGDLLHDNGSSHGISHGKDDREGNQYRPWRSASSQSRGRGGPHQSITPSKQVSTFSYGRGRGENTPPTFSVSRGRMGSIGGSNYSNLIHSIPFGSLGDKFEGGQDEPYTLKYARTKLLDVYRTTEVRSCQSVPDGFVPVPSLTLEEPLEPLALCVPDREEMVVLNGIDIGDVISSGAPQIAKDGRNSLDMGQARQNKLVAREDLPQDLNENKEEGSEGTKVSSINFSDGPYERQMQFHGSQLKMEASQDCKISAGNKLKTEASREDGNYTQADEIQSSKELSFRKNISVHPGASWKTLSIGENNHPSVPDWIENPNDVSFRTPERLLQSSKHLINELGNSLPNQLYTKDNIRCQIANDPIIRRQLSGIFGEEQRLRKPIQSSPEDLSLYYQDPSGVIQGPFTGIDIIGWFEAGYFGLDLLVRQENAPSDSPFSSLGDVMPHLRAKAKPPPGFGGPKQIEIVDASTNLSSSGFAQCHSGLSNKELVRNETRHKHGSATEAENKFLESLISANLSSSSFENSSFSEGMPIQFGNTSHNLPVSGVDGGNDPSLIAKRMAMDRQKSLPNIYQYWQGRDAASMISKSEPFQDSHQPLSKLLTPILDNPRQTPYSQNVDMMSMLHGIPDGSSSGINNVAGTWSSFTGQCVSDALQGKIDMQHDQNLPTSAAFGLQQQRFQLQNPPSFTNQLPRAIENPSVVAAPEKIISSNLSQEQQLLNILHQQQLLPSNLPQDPQVLNMLQQQYLLQLYSQAPAPTQQISLLDKLLLLTQQQKQEQQLQLLRQQQLLSHVLSAQQSHQRIADPSYGQVNASSLQIQNAFTDPSRIQSSPEMLHDSSQLPILSVQGEHVTNFGDRLLQVTLDVTANVSVEGSSVALPHQIFGTQQGSMNVVFSEQANDILLKELLAVPKMCESSSLPNIMSRSMEHADLIDKDVSACEINTPKSIDHSTTLTLDVDGALTRLAAEAGIDSELFESDKAFVGLSSGAKGGISVTNPACEVKMNLESAYGKLEVERDVCSHGSSNQEVENVEICEPGKVSEKKSKKQKSLKLQPNSDQGKGIAKSIQDCKLPESSKPESGQLNLVSDKGAEQSLLRQESGNESKKIISSEAVDPPPIQSSMPGNFSGNGVETVGIKSDTRSSQLQTGQRAWNAAPGFKARSLLEIQEEEQKKAQTELVVSEIATSVKSISLSTSWTGIVGNIGETKKSSGRQEASINSKVKKSQLHDLLDEEVFPKFSEGDSQVSDSMYSSSSMVAMSKNSESMDDDKFIEAKETRKSRKKAAKAKGVGTKASLPVTSVDIPTGSSPIEKVKSSHHLPQEKEVTPTIPSGPSLSDFVFWKGEESANSSLTPVWSTDSGKVSKPTSLRDIQKEQERRISSQHPSQMPTPQKSQPTQISRSNVPSWSVSASSPSKVASPISIYSRPSSQSKNKGDEDLFWGPADNLKQETQQANFPQLTTQISWETIPTTGKVTSVGSLGRQKSLIGKASEITLSTSTSVRSSFRGKRDARTNHSEAIDFRDWCESECIRLIGSKDTSFLEFCLKQSRSEAELLLTENLGSYDPDHKFIDKFLNYKELLSADVLETAFQTRNDLKASGFGAKDGNSKYANSGDVDGNSTITPDGTSKGGSKKKGKKGKKVSASILGFNVVSNRIMMGEIQSVED 1830
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2574903 2581723 + Bpe008238.1 Bpe02g00397 98546

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00397 1830 MobiDBLite consensus disorder prediction 1773 1806 - -
Bpe02g00397 1830 MobiDBLite consensus disorder prediction 1206 1232 - -
Bpe02g00397 1830 MobiDBLite consensus disorder prediction 202 248 - -
Bpe02g00397 1830 MobiDBLite consensus disorder prediction 1262 1293 - -
Bpe02g00397 1830 MobiDBLite consensus disorder prediction 1547 1595 - -
Bpe02g00397 1830 SUPERFAMILY GYF domain 554 617 IPR035445 -
Bpe02g00397 1830 MobiDBLite consensus disorder prediction 1466 1607 - -
Bpe02g00397 1830 SMART gyf_5 561 619 IPR003169 GO:0005515
Bpe02g00397 1830 MobiDBLite consensus disorder prediction 378 392 - -
Bpe02g00397 1830 PANTHER GYF DOMAIN-CONTAINING PROTEIN 5 897 - -
Bpe02g00397 1830 CDD GYF 560 617 IPR003169 GO:0005515
Bpe02g00397 1830 MobiDBLite consensus disorder prediction 1509 1532 - -
Bpe02g00397 1830 PANTHER GYF DOMAIN-CONTAINING PROTEIN 896 1830 - -
Bpe02g00397 1830 MobiDBLite consensus disorder prediction 378 405 - -
Bpe02g00397 1830 Pfam GYF domain 564 610 IPR003169 GO:0005515
Bpe02g00397 1830 Gene3D - 548 627 IPR035445 -
Bpe02g00397 1830 ProSiteProfiles GYF domain profile. 560 611 IPR003169 GO:0005515
Bpe02g00397 1830 MobiDBLite consensus disorder prediction 83 248 - -
Bpe02g00397 1830 PANTHER GYF DOMAIN-CONTAINING PROTEIN 5 897 - -
Bpe02g00397 1830 MobiDBLite consensus disorder prediction 1466 1480 - -
Bpe02g00397 1830 MobiDBLite consensus disorder prediction 83 201 - -
Bpe02g00397 1830 MobiDBLite consensus disorder prediction 1776 1792 - -
Bpe02g00397 1830 PANTHER GYF DOMAIN-CONTAINING PROTEIN 896 1830 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00397 - - - qsu:112038346 1581.62
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe02g00397 Bpe04g00211 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00397 Bpe-Chr2:2574903 Bpe13g00818 Bpe-Chr13:14481327 1.72E-19 dispersed
Bpe02g00397 Bpe-Chr2:2574903 Bpe04g00211 Bpe-Chr4:1443441 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g930 Blo01g01558 . Bda01g00536 Bda03g00257 Bpe02g00397 Bpe04g00211 Bma04g00206 Bma01g02315 Cmo05g00241 Cmo12g00428 . . . Car12g00452 Sed11g1026 . Cpe07g00430 Bhi04g00258 Tan02g1949 Cmetu03g2269 . . . Lcy13g1995 Cla08g01498 Cam08g1988 Cec08g1563 Cco08g1700 Clacu08g1678 . Cre08g1461 Cone4ag1904 Cone7ag1818 . . . . . Cme03g01966 . . . . . . . . . . . Cma12g00478 Cma05g00232 Car05g00194 . Cpe11g00193 . . . . . . . . . . . . . . . Lsi08g01403 Csa02g02043 Chy03g01470 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004078 3 2 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 3 1 44
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe02g00397 Bpe_Chr02 FPKM 0.0 0.0 0.0 0.33814 1.40272 0.723996 0.338208 0.0 0.0 0.0