Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00406 ATGGTTAGTGGGTTTGGGGAGTCAACTAGCAGGCCATTCCAAAGCCCTTCTTTTTCTAATAACAACAGCAACAGCAACAACAATGATGCTGGCAATTTTGAGTGCAATATTTGCTTTGACTTGGCTCAAGATCCTATTGTAACCTTATGCGGCCATCTTTTCTGCTGGCCATGCCTTTACAAGTGGCTCAATATTCACTCGCATTCCCATGAATGCCCAGTTTGCAAGGCTCTCGTTGAAGAGGAGAAGTTGGTTCCCTTGTATGGTAGGGGAAAGACATCAACTGACCCAAGATCGAAATCAATTCCTGGCATTAATATTCCAAATCGCCCAGCCGGACAGAGACCAGAAACAGCTCCTCCTCCAGAGACAACTCACTTTCCCCAGCATGGGTTTGCACCCATGGGAGGTTTCGGTGGATTTGCACCCGCAGCAACTGCAAGATTTGGTAACTTCACATTTTCTGCAGCTTTTGGTGGTCTTATCCCATCTTTGTTCAACCTTCATTTGCATGGCTTCCCCGATCCTGCGATGTATGGTCCAGCTGCTAATTTTTCTTACGGCTTTTCTAATTTGTTTCATGGAGGCGTTGCAAATAGGCACGATAATCAAACACGTCAAGGGCAACAGGATTATTTTCTGAAGAGGCTACTTTTAGTTATAGGATTCTTTGCAACATGGGGGTTTAGATTTATTAACTTGAAAGAAACGCCTGTTGTTATCGTATTCAAATCATGCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCCATCCTTTTCTCATTCTCTCTCTTTCTCTTCCTCTCTCTTCCCTTTCCGCCTCAGCACGCTTCTTTTATTATGCCACCGCCACCTCCACATCTGGCCACTACAGGGAAGCCCCTCAGTTCTACAACTCCCCGGATTGCCCCTCCCTCGCCGATGACGACGTCGACCCCGACGAAGACGGCTCCCATCTGTGTTCTGATCGTGCCCTGCACGTGGCAATGACCTTGGACACTTCCTACATCAGAGGCTCTATGGCCGCTATCCTCTCCGTTCTCCAACACACCTCCTGCCCTGAAAACACCGTCTTCCACTTCATTGCCTCCGCCTCCTCCGGCGAGTCCCTCCTCCGCAACACCATTTCCTTTTCCTTTCCTTACCTCACCTTTCGAGTTTACCAGTTCGATGACTCCGCTATTTCAGACCTCATCTCAACGTCCATCCGGTCGGCGTTGGACTGCCCACTGAATTACGCTCGGAGCTACTTGGCTAACCTTCTTCCCCTTTGCGTTCCCCGAGTTATTTACCTCGATTCTGACGTTATTCTCGTCGACGACATCGCTAAACTCGCTAGCCATCCGAACGGTGCTGACTCAGTTCTGGCAGCACCGGAGTACTGTAATGCTAATTTTACAGCGTACTTTACGTCGGCGTTTTGGTCCAACCCTTCTCTCTCACTGACTTTTGCTAACCGAAAAGCCTGTTACTTCAACACTGGAGTTATGGTGATTGATCTACATCGATGGCGAGCTGGAGATTACACAGCCAAAATTGAAGAATGGATGCAGCTTCAGAAGAGGGTGAGAATCTACGAATTAGGTTCATTACCGCCGTTTTTACTCGTTTTCGCAGGAAACATTACTCCGGTGGATCACAGATGGAACCAACACGGGCTCGGAGGGGATAATTACCGGGGACTTTGCCGGGATCTGCACCCAGGTCCGGTGAGCCTCTTGCACTGGAGTGGAAAAGGAAAGCCATGGGTGAGATTAGACACCAACCGTCCTTGCCCTTTGGATGCTCTCTGGGCTCCTTATGATCTATTGCGAACTCCATTTTTGGATTCTTGA 1839 48.67 MVSGFGESTSRPFQSPSFSNNNSNSNNNDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLNIHSHSHECPVCKALVEEEKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPETAPPPETTHFPQHGFAPMGGFGGFAPAATARFGNFTFSAAFGGLIPSLFNLHLHGFPDPAMYGPAANFSYGFSNLFHGGVANRHDNQTRQGQQDYFLKRLLLVIGFFATWGFRFINLKETPVVIVFKSCISLSLSLSLSLLHPFLILSLSLPLSSLSASARFFYYATATSTSGHYREAPQFYNSPDCPSLADDDVDPDEDGSHLCSDRALHVAMTLDTSYIRGSMAAILSVLQHTSCPENTVFHFIASASSGESLLRNTISFSFPYLTFRVYQFDDSAISDLISTSIRSALDCPLNYARSYLANLLPLCVPRVIYLDSDVILVDDIAKLASHPNGADSVLAAPEYCNANFTAYFTSAFWSNPSLSLTFANRKACYFNTGVMVIDLHRWRAGDYTAKIEEWMQLQKRVRIYELGSLPPFLLVFAGNITPVDHRWNQHGLGGDNYRGLCRDLHPGPVSLLHWSGKGKPWVRLDTNRPCPLDALWAPYDLLRTPFLDS 612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2636777 2640393 + Bpe008247.1 Bpe02g00406 98555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00406 612 SMART ring_2 35 75 IPR001841 -
Bpe02g00406 612 MobiDBLite consensus disorder prediction 1 25 - -
Bpe02g00406 612 SUPERFAMILY RING/U-box 32 88 - -
Bpe02g00406 612 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 1-RELATED 272 609 - -
Bpe02g00406 612 Pfam Zinc finger, C3HC4 type (RING finger) 34 75 - -
Bpe02g00406 612 SUPERFAMILY Nucleotide-diphospho-sugar transferases 328 604 IPR029044 -
Bpe02g00406 612 ProSitePatterns Zinc finger RING-type signature. 50 59 IPR017907 -
Bpe02g00406 612 MobiDBLite consensus disorder prediction 89 121 - -
Bpe02g00406 612 ProSiteProfiles Zinc finger RING-type profile. 35 76 IPR001841 -
Bpe02g00406 612 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 17 89 IPR013083 -
Bpe02g00406 612 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 272 609 - -
Bpe02g00406 612 Pfam Glycosyl transferase family 8 328 586 IPR002495 GO:0016757
Bpe02g00406 612 CDD RING-HC_AtRMA_like 33 77 - -
Bpe02g00406 612 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 328 593 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00406 Bpe-Chr2:2636777 Bpe06g00246 Bpe-Chr6:12900598 1.66E-162 dispersed
Bpe10g00217 Bpe-Chr10:8334740 Bpe02g00406 Bpe-Chr2:2636777 1.27E-95 dispersed
Bpe14g00655 Bpe-Chr14:5284151 Bpe02g00406 Bpe-Chr2:2636777 3.22E-28 dispersed
Bpe03g00559 Bpe-Chr3:25874191 Bpe02g00406 Bpe-Chr2:2636777 2.21E-19 transposed
Bpe03g01151 Bpe-Chr3:30567731 Bpe02g00406 Bpe-Chr2:2636777 4.78E-24 transposed
Bpe07g00777 Bpe-Chr7:14243204 Bpe02g00406 Bpe-Chr2:2636777 4.13E-06 transposed
Bpe15g00363 Bpe-Chr15:15181409 Bpe02g00406 Bpe-Chr2:2636777 1.73E-91 wgd
Bpe02g00406 Bpe-Chr2:2636777 Bpe05g00076 Bpe-Chr5:1353467 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00406 K20893 - zju:107420284 568.155