Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bpe02g00439	ATGGCTGTGGAGCTCATGGTGGGTTTTGGGTGCAACGGTTTCTCCGCAAAAATGGAGGAGGTTTCGGCCGTCTCCGCGGTACAAGAAGCGGCCTCTGCTGGTATTCAGGGGGTTGAGAATTTTCTCAGATTGATATCTAATGGATCCGATTCTCAGTTTCAAGAGCCATCTTCCAGTTTGAGCGTCGACGAAGTTGCGGACACGGTGGTCGATAAGTTCAAGAAGGTTATTTCCTTACTGGATCGTAATAGAACCGGCCACGCTCGCTTCAGGAAGGCTCCAACGGTTCCTCCACCGCAACAGCCGCAGAAGACGGACCAAGTTTCCGCTTTCAAGGCCTATTCTCGGACACCGGTGGCGCGTTTACCTCCTCTGCCTCACAATCCACCCACCTTCCAACCCCAGATCATCTCCTCTCACGTGGCGGTGAAGAAAGGGTCTGCAGAGATGAAGGAGGCGACTGCTACCACTATTACTTTTGCCTCTTCGACTCCCATTTCTGCTGCCAATTCGTATATTTCGTCGCTAACAGGGGATTCCGAGGGTTTCCAACCTTCGTTATCTTCTGGTTTTCAAATTACCTCGTCTTCTGGAAAGCCTCCACTATCTTCGTCTTTGCTGAAGAGGAAGTGTAACTCCATGGATGATGCTGCTGTCAAATGTGGCTCACCTTCTTCCCGATGCCACTGTTCAAAGAAAAGCAGAAAAAATAGAATAAAGAAAGTGGTCAGAATTCCGGCAGTGAGCCAGAAAATGGCCGATATTCCGGCGGACGACTATTCGTGGAGAAAGTATGGCCAAAAACCCATCAAAGGCTCTCCTCATCCAAGGGGATACTACAAGTGCAGTAGTGTGAGAGGCTGCCCGGCAAGGAAACACGTAGAGCGTGCCGTAGACGATCCAGGGATGCTGATTGTAACTTACGAGAACGATCACAATCATGCCCACTCGATCACGGAAGCAGCAACGGCTGTTGAATCGCGATGA	987	50.46	MAVELMVGFGCNGFSAKMEEVSAVSAVQEAASAGIQGVENFLRLISNGSDSQFQEPSSSLSVDEVADTVVDKFKKVISLLDRNRTGHARFRKAPTVPPPQQPQKTDQVSAFKAYSRTPVARLPPLPHNPPTFQPQIISSHVAVKKGSAEMKEATATTITFASSTPISAANSYISSLTGDSEGFQPSLSSGFQITSSSGKPPLSSSLLKRKCNSMDDAAVKCGSPSSRCHCSKKSRKNRIKKVVRIPAVSQKMADIPADDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERAVDDPGMLIVTYENDHNHAHSITEAATAVESR	328

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
2	2866867	2868051	-	Bpe008280.1	Bpe02g00439	98588

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bpe02g00439	328	Pfam	WRKY DNA -binding domain	258	314	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bpe02g00439	328	SMART	WRKY_cls	256	316	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bpe02g00439	328	SUPERFAMILY	WRKY DNA-binding domain	254	315	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bpe02g00439	328	PANTHER	WRKY TRANSCRIPTION FACTOR NTEIG-D48	19	325	-	-
	Bpe02g00439	328	ProSiteProfiles	WRKY domain profile.	251	317	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bpe02g00439	328	Gene3D	WRKY domain	244	317	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bpe02g00439	328	PANTHER	WRKY TRANSCRIPTION FACTOR 21-RELATED	19	325	IPR044810	GO:0003700
	Bpe02g00439	328	Pfam	Plant zinc cluster domain	208	254	IPR018872	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	Bpe02g00439	Bpe04g00173	BCT

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	Bpe02g00439	Bpe-Chr2:2866867	Bpe02g00606	Bpe-Chr2:3946555	1.22E-74	dispersed
	Bpe02g00439	Bpe-Chr2:2866867	Bpe04g00173	Bpe-Chr4:1125445	0	wgd

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	20877	PF03106	WRKY	5.10E-25	CL0274	Bpe	TF

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bpe02g00439	-		-	mcha:111013012	419.468