Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g00439 | ATGGCTGTGGAGCTCATGGTGGGTTTTGGGTGCAACGGTTTCTCCGCAAAAATGGAGGAGGTTTCGGCCGTCTCCGCGGTACAAGAAGCGGCCTCTGCTGGTATTCAGGGGGTTGAGAATTTTCTCAGATTGATATCTAATGGATCCGATTCTCAGTTTCAAGAGCCATCTTCCAGTTTGAGCGTCGACGAAGTTGCGGACACGGTGGTCGATAAGTTCAAGAAGGTTATTTCCTTACTGGATCGTAATAGAACCGGCCACGCTCGCTTCAGGAAGGCTCCAACGGTTCCTCCACCGCAACAGCCGCAGAAGACGGACCAAGTTTCCGCTTTCAAGGCCTATTCTCGGACACCGGTGGCGCGTTTACCTCCTCTGCCTCACAATCCACCCACCTTCCAACCCCAGATCATCTCCTCTCACGTGGCGGTGAAGAAAGGGTCTGCAGAGATGAAGGAGGCGACTGCTACCACTATTACTTTTGCCTCTTCGACTCCCATTTCTGCTGCCAATTCGTATATTTCGTCGCTAACAGGGGATTCCGAGGGTTTCCAACCTTCGTTATCTTCTGGTTTTCAAATTACCTCGTCTTCTGGAAAGCCTCCACTATCTTCGTCTTTGCTGAAGAGGAAGTGTAACTCCATGGATGATGCTGCTGTCAAATGTGGCTCACCTTCTTCCCGATGCCACTGTTCAAAGAAAAGCAGAAAAAATAGAATAAAGAAAGTGGTCAGAATTCCGGCAGTGAGCCAGAAAATGGCCGATATTCCGGCGGACGACTATTCGTGGAGAAAGTATGGCCAAAAACCCATCAAAGGCTCTCCTCATCCAAGGGGATACTACAAGTGCAGTAGTGTGAGAGGCTGCCCGGCAAGGAAACACGTAGAGCGTGCCGTAGACGATCCAGGGATGCTGATTGTAACTTACGAGAACGATCACAATCATGCCCACTCGATCACGGAAGCAGCAACGGCTGTTGAATCGCGATGA | 987 | 50.46 | MAVELMVGFGCNGFSAKMEEVSAVSAVQEAASAGIQGVENFLRLISNGSDSQFQEPSSSLSVDEVADTVVDKFKKVISLLDRNRTGHARFRKAPTVPPPQQPQKTDQVSAFKAYSRTPVARLPPLPHNPPTFQPQIISSHVAVKKGSAEMKEATATTITFASSTPISAANSYISSLTGDSEGFQPSLSSGFQITSSSGKPPLSSSLLKRKCNSMDDAAVKCGSPSSRCHCSKKSRKNRIKKVVRIPAVSQKMADIPADDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERAVDDPGMLIVTYENDHNHAHSITEAATAVESR | 328 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2866867 | 2868051 | - | Bpe008280.1 | Bpe02g00439 | 98588 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g00439 | 328 | Pfam | WRKY DNA -binding domain | 258 | 314 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe02g00439 | 328 | SMART | WRKY_cls | 256 | 316 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe02g00439 | 328 | SUPERFAMILY | WRKY DNA-binding domain | 254 | 315 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe02g00439 | 328 | PANTHER | WRKY TRANSCRIPTION FACTOR NTEIG-D48 | 19 | 325 | - | - | |
Bpe02g00439 | 328 | ProSiteProfiles | WRKY domain profile. | 251 | 317 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe02g00439 | 328 | Gene3D | WRKY domain | 244 | 317 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe02g00439 | 328 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 19 | 325 | IPR044810 | GO:0003700 | |
Bpe02g00439 | 328 | Pfam | Plant zinc cluster domain | 208 | 254 | IPR018872 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe02g00439 | Bpe04g00173 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g00439 | Bpe-Chr2:2866867 | Bpe02g00606 | Bpe-Chr2:3946555 | 1.22E-74 | dispersed | |
Bpe02g00439 | Bpe-Chr2:2866867 | Bpe04g00173 | Bpe-Chr4:1125445 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
20877 | PF03106 | WRKY | 5.10E-25 | CL0274 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g00439 | - | - | mcha:111013012 | 419.468 |