Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00439 ATGGCTGTGGAGCTCATGGTGGGTTTTGGGTGCAACGGTTTCTCCGCAAAAATGGAGGAGGTTTCGGCCGTCTCCGCGGTACAAGAAGCGGCCTCTGCTGGTATTCAGGGGGTTGAGAATTTTCTCAGATTGATATCTAATGGATCCGATTCTCAGTTTCAAGAGCCATCTTCCAGTTTGAGCGTCGACGAAGTTGCGGACACGGTGGTCGATAAGTTCAAGAAGGTTATTTCCTTACTGGATCGTAATAGAACCGGCCACGCTCGCTTCAGGAAGGCTCCAACGGTTCCTCCACCGCAACAGCCGCAGAAGACGGACCAAGTTTCCGCTTTCAAGGCCTATTCTCGGACACCGGTGGCGCGTTTACCTCCTCTGCCTCACAATCCACCCACCTTCCAACCCCAGATCATCTCCTCTCACGTGGCGGTGAAGAAAGGGTCTGCAGAGATGAAGGAGGCGACTGCTACCACTATTACTTTTGCCTCTTCGACTCCCATTTCTGCTGCCAATTCGTATATTTCGTCGCTAACAGGGGATTCCGAGGGTTTCCAACCTTCGTTATCTTCTGGTTTTCAAATTACCTCGTCTTCTGGAAAGCCTCCACTATCTTCGTCTTTGCTGAAGAGGAAGTGTAACTCCATGGATGATGCTGCTGTCAAATGTGGCTCACCTTCTTCCCGATGCCACTGTTCAAAGAAAAGCAGAAAAAATAGAATAAAGAAAGTGGTCAGAATTCCGGCAGTGAGCCAGAAAATGGCCGATATTCCGGCGGACGACTATTCGTGGAGAAAGTATGGCCAAAAACCCATCAAAGGCTCTCCTCATCCAAGGGGATACTACAAGTGCAGTAGTGTGAGAGGCTGCCCGGCAAGGAAACACGTAGAGCGTGCCGTAGACGATCCAGGGATGCTGATTGTAACTTACGAGAACGATCACAATCATGCCCACTCGATCACGGAAGCAGCAACGGCTGTTGAATCGCGATGA 987 50.46 MAVELMVGFGCNGFSAKMEEVSAVSAVQEAASAGIQGVENFLRLISNGSDSQFQEPSSSLSVDEVADTVVDKFKKVISLLDRNRTGHARFRKAPTVPPPQQPQKTDQVSAFKAYSRTPVARLPPLPHNPPTFQPQIISSHVAVKKGSAEMKEATATTITFASSTPISAANSYISSLTGDSEGFQPSLSSGFQITSSSGKPPLSSSLLKRKCNSMDDAAVKCGSPSSRCHCSKKSRKNRIKKVVRIPAVSQKMADIPADDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERAVDDPGMLIVTYENDHNHAHSITEAATAVESR 328
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 2866867 2868051 - Bpe008280.1 Bpe02g00439 98588
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00439 328 Pfam WRKY DNA -binding domain 258 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe02g00439 328 SMART WRKY_cls 256 316 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe02g00439 328 SUPERFAMILY WRKY DNA-binding domain 254 315 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe02g00439 328 PANTHER WRKY TRANSCRIPTION FACTOR NTEIG-D48 19 325 - -
Bpe02g00439 328 ProSiteProfiles WRKY domain profile. 251 317 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe02g00439 328 Gene3D WRKY domain 244 317 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe02g00439 328 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 19 325 IPR044810 GO:0003700
Bpe02g00439 328 Pfam Plant zinc cluster domain 208 254 IPR018872 -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Bpe02g00439 Bpe04g00173 BCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00439 Bpe-Chr2:2866867 Bpe02g00606 Bpe-Chr2:3946555 1.22E-74 dispersed
Bpe02g00439 Bpe-Chr2:2866867 Bpe04g00173 Bpe-Chr4:1125445 0 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20877 PF03106 WRKY 5.10E-25 CL0274 Bpe TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00439 - - mcha:111013012 419.468