Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00445 ATGTCTTTGTTCTTGTGTTTCTTGCTGTTTTTTGCTTTTCATGGCGTCTTCAACCACCTGCTGCGGAGAGCACGACACTACCCACCGACCGTTTTCCCTTCTCTTCCTTTCATTGGCCATCTCTACCTCCTCAGAAAACCTCTTCACAGAACCCTCTCCGCTATCTCAGCCCGATACGGTCCGTTACTCTATCTCCATTTCGGCACTCGTCATGTCCTCCTTGTTTCGTCTCCTTCTGCTGCAGAGGAATGTCTCAGTAACAACGACGTCGTTTTCGCAAACCGCCCTCGCCTCCTTGCTGGGAAATACATGGGTTATAACTACACTACCCTCGCTTGGGCTCCTTACGGCAACCACTGGCGGAATCTCCGACGAATCTCCTCCCTCCAACTTCTGTCATCTGCCAATCTCCAGACTCTTTCTCATATACGAGCTGATGAGGTCCGCTCGTTGATCTTCTGGCTGTCGCAATATCCAAATCAATTGGTGGATATGAGATCAGCACTCTTTGGATTACTACTGAATATCATAACTCGAATGATTGGGGGAAAACGATACTATGGAGATGAAGTGGCGGACATAGAAAAAGCTGGAAGGTTCAAAGCTATTATTGAAGAATCATTTCTGTTGCAGTCCGTGTCGAATGTGGCAGATTTTCTGCCATATTTGGGGTGGTTTGCAGGCAGACGGATGGAGAAGAAGTTGCAGGCGCTGCAGAAGAAGAGAGATAGCTTCATGCAAAGCTTGATAGAAGAGCGTAGGAATTTGAGACCTTCTTCGGAAGAGAAGAAGAACACCATGATTGACGTTTTGCTGTCTCTGCAAGAATCTGAGCCGGAATATTACCCTGATCATGTTATTATCGGCCTCATGATGGTTCTCCTAGCAGCAGGAACAGATACCTCAGTTGGAACCCTAGAGTGGGCGATGTCGTTTTTGCTTAACAACCCAGAAGTTCTGAAGAAAACAATGGCGGAAATAGACGATCGAGTGGGCCAAGAACGCCTGATCAATGAATCAGATTTAGCCAACCTTCCTTACTTGCATTGCGTGATAAAGGAAACTCTGCGAATCAGCCCACCCGGGCCGCTACTGCCACACGAGTCATCCGCCGACTGCATCGTGGGTGGCTTCAAGGTTCCACGTGGCACGCTTCTGATGGTGAACGTATGGGGCATACAAAATGATCCAAGGTATTGGGAGGACCCCACAAGATTCGACCCGGATAGGTTCGTCGGATCAGAAGGGTTAAGAGATGGGTTCAAGTTTATACCATTTGGGTCGGGTAGAAGGGCTTGTCCAGGCGAAGGGTTAGCCATGCGAGTGGTTGGGTTAGCCTTGGGCTCCCTCGTTCAGTGCTTTGAGTGGGAGAGAGCGAGCAAGGAAATGGTGGATTTGAGGGAAGGAAATGGTCTAAGCATGCCTAAGGCCATTCCTCTCAAAGCTAAGTGCCACCCTCGCTCAATTACGCTTCAACTTCTCTCTCAAAAATAA 1494 48.59 MSLFLCFLLFFAFHGVFNHLLRRARHYPPTVFPSLPFIGHLYLLRKPLHRTLSAISARYGPLLYLHFGTRHVLLVSSPSAAEECLSNNDVVFANRPRLLAGKYMGYNYTTLAWAPYGNHWRNLRRISSLQLLSSANLQTLSHIRADEVRSLIFWLSQYPNQLVDMRSALFGLLLNIITRMIGGKRYYGDEVADIEKAGRFKAIIEESFLLQSVSNVADFLPYLGWFAGRRMEKKLQALQKKRDSFMQSLIEERRNLRPSSEEKKNTMIDVLLSLQESEPEYYPDHVIIGLMMVLLAAGTDTSVGTLEWAMSFLLNNPEVLKKTMAEIDDRVGQERLINESDLANLPYLHCVIKETLRISPPGPLLPHESSADCIVGGFKVPRGTLLMVNVWGIQNDPRYWEDPTRFDPDRFVGSEGLRDGFKFIPFGSGRRACPGEGLAMRVVGLALGSLVQCFEWERASKEMVDLREGNGLSMPKAIPLKAKCHPRSITLQLLSQK 497
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2909504 2911067 + Bpe008286.1 Bpe02g00445 98594

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00445 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Bpe02g00445 497 PANTHER CYTOCHROME P450 81E8 16 496 - -
Bpe02g00445 497 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe02g00445 497 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe02g00445 497 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe02g00445 497 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe02g00445 497 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe02g00445 497 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe02g00445 497 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe02g00445 497 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe02g00445 497 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe02g00445 497 PANTHER CYTOCHROME P450 82C3-RELATED 16 496 - -
Bpe02g00445 497 Gene3D Cytochrome P450 21 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe02g00445 497 Pfam Cytochrome P450 29 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe02g00445 497 Coils Coil 235 255 - -
Bpe02g00445 497 SUPERFAMILY Cytochrome P450 28 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe02g00445 497 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe02g00445 497 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe02g00445 497 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe02g00445 497 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00445 - - - vvi:100267741 627.091
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00445 Bpe-Chr2:2909504 Bpe06g00168 Bpe-Chr6:3542103 4.50E-160 dispersed
Bpe02g01348 Bpe-Chr2:17114431 Bpe02g00445 Bpe-Chr2:2909504 4.28E-57 transposed
Bpe13g00110 Bpe-Chr13:7186531 Bpe02g00445 Bpe-Chr2:2909504 4.42E-166 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g687 . . . . Bpe02g00445 . . . . . . . . . . . . . . . . . . . Cla08g01605 . . . . . . . . . . Lsi04g01506 Csa04g02458 . Cme03g02084 . . . . . . . . . . . . . . . . Cpe02g00207 . . . . . . . Cla05g02088 . . . . . . Lsi08g01509 . Chy07g00172 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000014 8 19 13 8 6 18 15 17 16 19 16 18 14 17 19 19 18 9 12 19 19 25 15 12 12 20 11 24 18 21 477
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe02g00445 Bpe_Chr02 FPKM 87.18679 96.885422 68.281097 62.295311 98.564888 99.580238 93.584297 106.707024 112.389076 101.879372