Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00446 ATGACCGATCAATTCCGACTAGACGATTCGAAGGATGGGGACGGAGCGGAAGAGGCAAATAGTCTTTTGAAGCCCAAATCAGGGTCGCCCCCGTCGTTGTCGTTGTCTCCTTCTTTGGAAGACGACGACGAGGACGCAGCCTTCGAAGCAAGAGAGAAGATCGTGGTCGTAGATTTAGACTCAGACAACGGCGGCGATTCGACTATGGTACCTCCTTTCTCGTGGAAGAAGCTCTGGTTGTTTACAGGCCCGGGGTTTTTGATGAGCATAGCGTTCTTAGATCCGGGGAATTTGGAAGGGGATCTTCAGGCCGGAGCTATTGCAGGCTACTCATTGCTTTGGTTATTGATGTGGGCAACGGCCATGGGGCTGCTGATCCAGCTCTTATCGGCCAGAGTCGGCGTCGCTACTGGTCGGCACTTGGCCGAGCTGTGCAGGGAAGAGTATCCAAACTGGGCTAGATTAGTTTTGTGGTGCATGGCGGAGCTGGCCTTGATTGGTGCTGACATTCAGGAGGTCATCGGAAGTGCGATTGCTATCCAAATTCTCAGCAATGGACTTCTGCCTCTTTGGGCTGGCGTTATCATTACTGCATCCGATTGTTTCTTGTTTTTATTTCTCGAGAATTATGGCGTTCGGAAGTTAGAAGCTGTCTTTGCCGTCCTTATCGCAACCATGGCCGTATCCTTTGCGTGGATGTTCGGTGACACTAATCCAAACCAGAAAGAACTTTTAATGGGTATTCTAATTCCAAGACTTAGCTCCAAGACAATTCGACAAGCTGTTGGGGTCGTTGGCTGTGTCATAATGCCCCATAACGTATTCTTGCATTCTGCTTTAGTACAATCAAGGAACATCGATCCAAATAAAAAAGGGCGAGTGCAAGAAGCCCTAAACTACTACTCTATCGAGTCATCAATCGCCCTTCTCATCTCTTTCATGATCAATTTGTTCGTCACCACAGTGTTTGCCAAGGGATTTTACGGGTCTCCGCAGGCCAATAATATCGGGCTTGTAAATGCCGGGCAGTATCTCGAGCAGAAATACGGCGGAGGACTATTTCCAATACTTTACATTTGGGGTATTGGCTTGTTGGCTGCCGGACAGAGTAGCACCATTACCGGAACATATGCCGGACAGTTTATAATGGGTGGTTTTCTTAACCTGCGGTTGAAGAAATGGTTGAGAGCATTGATTACGCGCAGTTTTGCAATTGTTCCGACGATGGTTGTAGCTCTCATGTTCAATACGTCAGAAGCTTCATTAGATGTTTTAAATGAATGGCTTAATGTTCTTCAGTCCATACAAATTCCCTTTGCTCTCATTCCTCTTCTTACATTGGTGTCCAGAGAGCAGATCATGGGGGTTTTCAAAATTGGCCCCGTTCTTGAGAGGGCAGCGTGGACTGTCGCCGCATTGGTGATGATAATCAACGGGTATCTACTATTAGATTTCATCCTTTCTGAAGTTCGAGGAATTCTTTTCGGCTTTATGGTCTGCTCAGCCATAGTTGCATATGTATCCTTTATATTCTATCTCATTTCCCACGGCGGGACTCTTCCCTCTACTTGGTTCCATTCCCTGGTAAAGTCAATAGGAATACGCCGGAGCGGTGTCTGA 1620 47.28 MTDQFRLDDSKDGDGAEEANSLLKPKSGSPPSLSLSPSLEDDDEDAAFEAREKIVVVDLDSDNGGDSTMVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLLIQLLSARVGVATGRHLAELCREEYPNWARLVLWCMAELALIGADIQEVIGSAIAIQILSNGLLPLWAGVIITASDCFLFLFLENYGVRKLEAVFAVLIATMAVSFAWMFGDTNPNQKELLMGILIPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRNIDPNKKGRVQEALNYYSIESSIALLISFMINLFVTTVFAKGFYGSPQANNIGLVNAGQYLEQKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSFAIVPTMVVALMFNTSEASLDVLNEWLNVLQSIQIPFALIPLLTLVSREQIMGVFKIGPVLERAAWTVAALVMIINGYLLLDFILSEVRGILFGFMVCSAIVAYVSFIFYLISHGGTLPSTWFHSLVKSIGIRRSGV 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2912104 2914548 + Bpe008287.1 Bpe02g00446 98595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00446 539 PANTHER BNAC08G04640D PROTEIN 37 529 - -
Bpe02g00446 539 MobiDBLite consensus disorder prediction 1 19 - -
Bpe02g00446 539 Hamap Divalent metal cation transporter MntH [mntH]. 61 486 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe02g00446 539 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 37 529 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe02g00446 539 Pfam Natural resistance-associated macrophage protein 99 460 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe02g00446 539 MobiDBLite consensus disorder prediction 1 44 - -
Bpe02g00446 539 PRINTS Natural resistance-associated macrophage protein signature 368 387 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe02g00446 539 PRINTS Natural resistance-associated macrophage protein signature 430 449 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe02g00446 539 PRINTS Natural resistance-associated macrophage protein signature 396 413 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe02g00446 539 PRINTS Natural resistance-associated macrophage protein signature 157 183 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe02g00446 539 PRINTS Natural resistance-associated macrophage protein signature 187 206 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe02g00446 539 PRINTS Natural resistance-associated macrophage protein signature 261 284 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe02g00446 539 PRINTS Natural resistance-associated macrophage protein signature 212 233 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe02g00446 539 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 76 454 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00446 Bpe-Chr2:2912104 Bpe06g00677 Bpe-Chr6:17405797 7.98E-106 dispersed
Bpe13g00112 Bpe-Chr13:7212742 Bpe02g00446 Bpe-Chr2:2912104 0 wgd
Bpe15g00316 Bpe-Chr15:14663124 Bpe02g00446 Bpe-Chr2:2912104 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00446 K21398 - mnt:21393551 855.514