Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00465 AGAAGAAAGATGAAGCCCACTGACGATCTTAAAAATGGTGGCAGTAATAATCATAGCTGGTTGGGGTTTTCTCTGTCGCCATACATGAAAATGGAGGATAATGCTTCAACGTCTGTCTCGAATGCTTTTCCGACCGGCTGCTACTCATACCCTCATTTCAACAGCTCTCCGTTCGGCTATGAGATTGGTGGAAATGGCGGATTTCACTCTCCATTGACTGTGATGCCTCTCAAGCTCGACGGATCTCTTTCGATTATGGAAGCTCTAACTAGATCACAGCCCGAAGGGATGGTTCTCAATTCCTCGCCGAAGTTGGAGGACTTTCTGGGTGGAGCAAGCTTGGGGACACTAACAAACGAGTATGGAAGCCATGGAAAAGAAGCAATCTTTTACAATCACAGCGATTCAGAAACAGAGAGGGAACTTTCTCTCGATCTTCTTCAACAGCCCTACAGGCAACAGGAGAGCCACATTCCTGTTAATTCCCATCCCTACATTTCAGGATTCCCCTGTCATGGTTTATACAATCCGCCATCAGAGGAGGAATCGAAGCTCCATATACCCAGCTGGGTGGTTCGTCAGTACTCTGTAAATCAGCCACTGGAGCAGCATTTAACCAACGAGATGATTGAAGTTGGAGCTTCTTCCGGCTCTGTTGGTGCGCTGAGCTGCGGGGATTTACAGTCGCTAAGTCTATCAATGAGCCCTGGTTCACAGTCTAGCTGCGTAACTGCTCCCAGCCAGATCTCGGCAACTGGTGTAGAATGTGCACCCAATAAAACGAAGAAGAGATGCTCTGCGAAGATGGGGCAGAAGCAGCCCATCCATAGGAAGTCCATTGATACTTTTGGACAAAGAACATCACAGTACAGAGGCGTTACGAGGTTTAATTTTAGGCATCGATGGACCGGAAGGTATGAAGCTCACTTATGGGATAACAGTTGCAAAAAAGAAGGTCAAACCAGAAAAGGAAGACAAGATTTCTATCTATATTTACTATCAGACCTATGTATTTTTCTTTATATTAACTTGACGCTGGAGAACTATCATACTGAGCTTGAAGAAATGAAGAACATGACCCGGCAGGAATATGTCGCTCACTTGAGAAGAAAAAGTAGTGGTTTTTCCCGTGGAGCTTCGATGTACAGAGGAGTGACAAGGCATCACCAGCATGGAAGATGGCAAGCTCGGATTGGCCGAGTCGCCGGAAACAAAGATCTTTATCTGGGGACATTTAGCACCCAAGAGGAAGCTGCTGAAGCTTATGACATTGCTGCAGTGAAGTTCCGAGGGGTAAATGCTGTCACCAATTTTGACATTTCACATTATGACGTCGAGAAAATCATAGCCAGCAGTACTCTACTGGCTGGCGAATTTGCTCGACGAAGCAAAGTCATAGATCACAAACCACAAGAGAAGGAGAGTGAGGAAATTAATCTCTCTGAAAACACCATCGGCGGCAGTGGGGAAACTCATTGGCAGATTGAATCCGCCAGCAGTAAGAATATGATAAACACGGCTCACAGTCTGATGGGAATGGAATCGGTCAACCCGACCGATCCCATAGTTAACGAAAAGACCAAGCCCAGGCATCATTTTCCTATTCCCACACCTTCGCCTACGACGTTGAGCCGGTCAAGAAACGCCAATGCAGACAAAAACAGCGTGGGGATGCTCTTTGCAAAGCCCCCATTGGCATGGCTGCCCACCGCACAGCAGAGGTCTCCTGTTATTTCTATGGCTCAGCTGCCTGTTTTTGCAGCGTGGAACGACACCTAA 1779 46.94 RRKMKPTDDLKNGGSNNHSWLGFSLSPYMKMEDNASTSVSNAFPTGCYSYPHFNSSPFGYEIGGNGGFHSPLTVMPLKLDGSLSIMEALTRSQPEGMVLNSSPKLEDFLGGASLGTLTNEYGSHGKEAIFYNHSDSETERELSLDLLQQPYRQQESHIPVNSHPYISGFPCHGLYNPPSEEESKLHIPSWVVRQYSVNQPLEQHLTNEMIEVGASSGSVGALSCGDLQSLSLSMSPGSQSSCVTAPSQISATGVECAPNKTKKRCSAKMGQKQPIHRKSIDTFGQRTSQYRGVTRFNFRHRWTGRYEAHLWDNSCKKEGQTRKGRQDFYLYLLSDLCIFLYINLTLENYHTELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAVKFRGVNAVTNFDISHYDVEKIIASSTLLAGEFARRSKVIDHKPQEKESEEINLSENTIGGSGETHWQIESASSKNMINTAHSLMGMESVNPTDPIVNEKTKPRHHFPIPTPSPTTLSRSRNANADKNSVGMLFAKPPLAWLPTAQQRSPVISMAQLPVFAAWNDT 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3022571 3025104 + Bpe008306.1 Bpe02g00465 98614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00465 592 CDD AP2 380 441 IPR001471 GO:0003700|GO:0006355
Bpe02g00465 592 SMART rav1_2 381 445 IPR001471 GO:0003700|GO:0006355
Bpe02g00465 592 MobiDBLite consensus disorder prediction 526 547 - -
Bpe02g00465 592 ProSiteProfiles AP2/ERF domain profile. 381 439 IPR001471 GO:0003700|GO:0006355
Bpe02g00465 592 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 16 591 - -
Bpe02g00465 592 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 16 591 - -
Bpe02g00465 592 Pfam AP2 domain 382 431 IPR001471 GO:0003700|GO:0006355
Bpe02g00465 592 SUPERFAMILY DNA-binding domain 380 441 IPR016177 GO:0003677
Bpe02g00465 592 Gene3D AP2/ERF domain 288 355 IPR036955 GO:0003700|GO:0006355
Bpe02g00465 592 Gene3D AP2/ERF domain 381 441 IPR036955 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00465 Bpe04g00142 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00465 Bpe-Chr2:3022571 Bpe11g01266 Bpe-Chr11:9463537 2.76E-89 dispersed
Bpe10g00016 Bpe-Chr10:280149 Bpe02g00465 Bpe-Chr2:3022571 4.90E-68 wgd
Bpe02g00465 Bpe-Chr2:3022571 Bpe04g00142 Bpe-Chr4:956633 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20882 PF00847 AP2 4.80E-09 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00465 K09285 - zju:107420624 664.84