Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00466 ATGGAAGATTTGGAAAGTAATGATGAGCAATTTCAGCGTAGAAGAGAAGGCATTATGCATTGTTCATCTTCTGAGATGAACACCAACCCAAATCCAATGCCTGAAAAGATTTCTGGAATGTCTATTGGGACTCTTGCTCTGTACAAATCTTCAATTGGAAGCTCTGGGGAGGCTTTCGTTTCTTCTGGATGGGATTCGTTTGCTAACCTGGGTGAGAGGGTGAATTTTGGATCCTTTATTTCTCATGATGAGTTATCCAGTTCTTACCAGCATGACATGTTGGAAAATCCTCACTCATTTGATTCGACTTATGTCGAGATGGTTCCGAAATTTCCGAGCTTTTCAAGTGGCAATTTCTCAGAAATGGGTAGTTCATTTGTTCTACCTCAATATCTCCAGATTGTTAATGATGATTGTCTTTCAAATATTCAAGAAAACAGAGCCGCCGGATCTTCCCCAAATGACAAGAGCAGAAAGCGAGGGCCTGATACTGCTTCATCGTTCAGATCATATGAGAAAGTTGAAATGGATTTGGGTAAGGATTCAAATGGAGAAAGCTCTGATGGTTTAAGAGAACAAGATCAGAAAAAACCAAAGATTGATGACAACAATGGCAGGAATTTGCTTAACAAGCCGACCATAAAACAAGCAAAAGACAACTCTCCCAAGGCAGAAACCTCCAAGGAAAACTACATTCACGTAAGAGCCCGCAGAGGGGAGGCCACGAATAGTCACAGCCTCGCGGAAAGGATACGGAGAGAAAAGATTAGTGAGCGGATGAAATTGCTTCAAGAACTCGTCCCGGGATGCAACAAGATTACAGGCAAGGCGGTAATGCTGGACGAAATTATCAATTATGTTCAATCACTGCAGCAGCAGGTCGAGTTTCTGTCTATGAAACTTGCCACTGTAAATCCGGAGATTTATACCGATGTAGAGGGTATTCTATCAAAAGATGTAAGTATGAGCAAGGACTTGTTGATTCTTCTGTCGAAACAATATAAAACTGGCTTTAGCTGTCTTTTATTCCTCCAGATGCTTCACTCTCAGGGCTCCAATGGAGAAATTCTTGGGGTTGGCTCTTCTCAACGGTTCTTCCCTCGAAGAATGTTACTGCCTCAAACTGCGTTTTCTCAGTTTCTTCCTGTCTCGAGTGAGTTTAGGATCCTCGAATGA 1176 42.09 MEDLESNDEQFQRRREGIMHCSSSEMNTNPNPMPEKISGMSIGTLALYKSSIGSSGEAFVSSGWDSFANLGERVNFGSFISHDELSSSYQHDMLENPHSFDSTYVEMVPKFPSFSSGNFSEMGSSFVLPQYLQIVNDDCLSNIQENRAAGSSPNDKSRKRGPDTASSFRSYEKVEMDLGKDSNGESSDGLREQDQKKPKIDDNNGRNLLNKPTIKQAKDNSPKAETSKENYIHVRARRGEATNSHSLAERIRREKISERMKLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEIYTDVEGILSKDVSMSKDLLILLSKQYKTGFSCLLFLQMLHSQGSNGEILGVGSSQRFFPRRMLLPQTAFSQFLPVSSEFRILE 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3028853 3030403 + Bpe008307.1 Bpe02g00466 98615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00466 391 Pfam Helix-loop-helix DNA-binding domain 243 291 IPR011598 GO:0046983
Bpe02g00466 391 MobiDBLite consensus disorder prediction 21 35 - -
Bpe02g00466 391 MobiDBLite consensus disorder prediction 206 220 - -
Bpe02g00466 391 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 238 308 IPR036638 GO:0046983
Bpe02g00466 391 MobiDBLite consensus disorder prediction 152 166 - -
Bpe02g00466 391 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 142 324 IPR024097 GO:0006355
Bpe02g00466 391 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 11 148 - -
Bpe02g00466 391 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 11 148 IPR024097 GO:0006355
Bpe02g00466 391 MobiDBLite consensus disorder prediction 1 36 - -
Bpe02g00466 391 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 240 290 IPR011598 GO:0046983
Bpe02g00466 391 CDD bHLH_AtBPE_like 230 315 - -
Bpe02g00466 391 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 142 324 - -
Bpe02g00466 391 MobiDBLite consensus disorder prediction 145 230 - -
Bpe02g00466 391 Gene3D - 237 311 IPR036638 GO:0046983
Bpe02g00466 391 SMART finulus 246 296 IPR011598 GO:0046983
Bpe02g00466 391 MobiDBLite consensus disorder prediction 173 204 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00466 Bpe-Chr2:3028853 Bpe13g00756 Bpe-Chr13:14089584 2.13E-45 dispersed
Bpe02g00466 Bpe-Chr2:3028853 Bpe13g01361 Bpe-Chr13:18848862 1.69E-49 transposed
Bpe02g00466 Bpe-Chr2:3028853 Bpe02g02301 Bpe-Chr2:23717586 1.22E-49 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20883 PF00010 HLH 7.80E-07 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00466 - - qsu:111985241 333.183