Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g00466 | ATGGAAGATTTGGAAAGTAATGATGAGCAATTTCAGCGTAGAAGAGAAGGCATTATGCATTGTTCATCTTCTGAGATGAACACCAACCCAAATCCAATGCCTGAAAAGATTTCTGGAATGTCTATTGGGACTCTTGCTCTGTACAAATCTTCAATTGGAAGCTCTGGGGAGGCTTTCGTTTCTTCTGGATGGGATTCGTTTGCTAACCTGGGTGAGAGGGTGAATTTTGGATCCTTTATTTCTCATGATGAGTTATCCAGTTCTTACCAGCATGACATGTTGGAAAATCCTCACTCATTTGATTCGACTTATGTCGAGATGGTTCCGAAATTTCCGAGCTTTTCAAGTGGCAATTTCTCAGAAATGGGTAGTTCATTTGTTCTACCTCAATATCTCCAGATTGTTAATGATGATTGTCTTTCAAATATTCAAGAAAACAGAGCCGCCGGATCTTCCCCAAATGACAAGAGCAGAAAGCGAGGGCCTGATACTGCTTCATCGTTCAGATCATATGAGAAAGTTGAAATGGATTTGGGTAAGGATTCAAATGGAGAAAGCTCTGATGGTTTAAGAGAACAAGATCAGAAAAAACCAAAGATTGATGACAACAATGGCAGGAATTTGCTTAACAAGCCGACCATAAAACAAGCAAAAGACAACTCTCCCAAGGCAGAAACCTCCAAGGAAAACTACATTCACGTAAGAGCCCGCAGAGGGGAGGCCACGAATAGTCACAGCCTCGCGGAAAGGATACGGAGAGAAAAGATTAGTGAGCGGATGAAATTGCTTCAAGAACTCGTCCCGGGATGCAACAAGATTACAGGCAAGGCGGTAATGCTGGACGAAATTATCAATTATGTTCAATCACTGCAGCAGCAGGTCGAGTTTCTGTCTATGAAACTTGCCACTGTAAATCCGGAGATTTATACCGATGTAGAGGGTATTCTATCAAAAGATGTAAGTATGAGCAAGGACTTGTTGATTCTTCTGTCGAAACAATATAAAACTGGCTTTAGCTGTCTTTTATTCCTCCAGATGCTTCACTCTCAGGGCTCCAATGGAGAAATTCTTGGGGTTGGCTCTTCTCAACGGTTCTTCCCTCGAAGAATGTTACTGCCTCAAACTGCGTTTTCTCAGTTTCTTCCTGTCTCGAGTGAGTTTAGGATCCTCGAATGA | 1176 | 42.09 | MEDLESNDEQFQRRREGIMHCSSSEMNTNPNPMPEKISGMSIGTLALYKSSIGSSGEAFVSSGWDSFANLGERVNFGSFISHDELSSSYQHDMLENPHSFDSTYVEMVPKFPSFSSGNFSEMGSSFVLPQYLQIVNDDCLSNIQENRAAGSSPNDKSRKRGPDTASSFRSYEKVEMDLGKDSNGESSDGLREQDQKKPKIDDNNGRNLLNKPTIKQAKDNSPKAETSKENYIHVRARRGEATNSHSLAERIRREKISERMKLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEIYTDVEGILSKDVSMSKDLLILLSKQYKTGFSCLLFLQMLHSQGSNGEILGVGSSQRFFPRRMLLPQTAFSQFLPVSSEFRILE | 391 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3028853 | 3030403 | + | Bpe008307.1 | Bpe02g00466 | 98615 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g00466 | 391 | Pfam | Helix-loop-helix DNA-binding domain | 243 | 291 | IPR011598 | GO:0046983 | |
Bpe02g00466 | 391 | MobiDBLite | consensus disorder prediction | 21 | 35 | - | - | |
Bpe02g00466 | 391 | MobiDBLite | consensus disorder prediction | 206 | 220 | - | - | |
Bpe02g00466 | 391 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 238 | 308 | IPR036638 | GO:0046983 | |
Bpe02g00466 | 391 | MobiDBLite | consensus disorder prediction | 152 | 166 | - | - | |
Bpe02g00466 | 391 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 142 | 324 | IPR024097 | GO:0006355 | |
Bpe02g00466 | 391 | PANTHER | TRANSCRIPTION FACTOR BHLH FAMILY-RELATED | 11 | 148 | - | - | |
Bpe02g00466 | 391 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 11 | 148 | IPR024097 | GO:0006355 | |
Bpe02g00466 | 391 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Bpe02g00466 | 391 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 240 | 290 | IPR011598 | GO:0046983 | |
Bpe02g00466 | 391 | CDD | bHLH_AtBPE_like | 230 | 315 | - | - | |
Bpe02g00466 | 391 | PANTHER | TRANSCRIPTION FACTOR BHLH FAMILY-RELATED | 142 | 324 | - | - | |
Bpe02g00466 | 391 | MobiDBLite | consensus disorder prediction | 145 | 230 | - | - | |
Bpe02g00466 | 391 | Gene3D | - | 237 | 311 | IPR036638 | GO:0046983 | |
Bpe02g00466 | 391 | SMART | finulus | 246 | 296 | IPR011598 | GO:0046983 | |
Bpe02g00466 | 391 | MobiDBLite | consensus disorder prediction | 173 | 204 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g00466 | Bpe-Chr2:3028853 | Bpe13g00756 | Bpe-Chr13:14089584 | 2.13E-45 | dispersed | |
Bpe02g00466 | Bpe-Chr2:3028853 | Bpe13g01361 | Bpe-Chr13:18848862 | 1.69E-49 | transposed | |
Bpe02g00466 | Bpe-Chr2:3028853 | Bpe02g02301 | Bpe-Chr2:23717586 | 1.22E-49 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
20883 | PF00010 | HLH | 7.80E-07 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g00466 | - | - | qsu:111985241 | 333.183 |