Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00473 ATGGAGGAATACAATCAGCTAAGAGAGAATTCGAACCCCAGGGGAAATTTCTTGTACAGTTCGGCTGTTCTTGCAGGCAATTCTTCTCCTTCTAATTATGGAAGATCGACAACTGGTGGCTCAAACGTGAGCTCTCAACCAACCCAGATGGCCATTAATACCTTTCATGGCGACTGTTTTCAGTCTGATCCTATCGTTAAGACTGAAGCGTCCACTTCGATGCATAATTTTCAGAAATTTCATTACCCATCGATACGAGGCCATCAAACTTCGGTTCACAGGAACGATGAAGGGTCTAACGATGTCGAGGCTATAAAGGCCAAGATCATTGCTCATCCCCATTATTCTAACCTTTTACAAGCTTATATGGATTGTCAAAAGGTGGGAGCTCCGCCTGAAGTGGCTGCAAGGCTGGCTGAGGCTCGCCGGGAGTTTGAAGCACGAGAGCGATCGGCGTCGAGGGATTATCCGAAAGATCCCGAACTTGATCAGTTCATGGAAGCGTATTACGATATGCTAGTGAAGTATCGGGAAGAGATTACGAGGCCAATACAGGAAGCTATGGATTTCATGAATCGGATTGAATCTCAACTCAATTCGCTTTGTAATGGACCTGTGCGGATCTTCCCCTCCGATGACAAGTGCGAAGGCCTTGGTTCATCGGAGGATGAACAGGAGAACAGCGGAGGGGAAATGGAACCTCCGGAGATCGATCCTAGAGCAGAAGATCGAGAGCTGAAGAATCACCTTCTAAGGAAGTATAGTGGTTATTTAAGCAGTCTGAAGCAAGAACTGTCAAAGAAAAAAAAGAAGGGAAAACTACCCAAAGATGCCAGGCAAAAGCTACTCAGCTGGTGGGAGTTGCATTATAAATGGCCATACCCATCGGAGACGGAGAAGGTGGCGCTGGCTGAGTCTACCGGGTTGGACCAGAAGCAAATAAACAATTGGTTCATAAATCAAAGAAAGAGACACTGGAAACCTTCTGAAGATATGCAATATATGGTGATGGATGGTCTTCATCCTCCCAATGGAGCTCTCTATATGGACTCCCACTATCTTGCTGATGGCCATTATCGGCTCGGACCGTGA 1092 46.34 MEEYNQLRENSNPRGNFLYSSAVLAGNSSPSNYGRSTTGGSNVSSQPTQMAINTFHGDCFQSDPIVKTEASTSMHNFQKFHYPSIRGHQTSVHRNDEGSNDVEAIKAKIIAHPHYSNLLQAYMDCQKVGAPPEVAARLAEARREFEARERSASRDYPKDPELDQFMEAYYDMLVKYREEITRPIQEAMDFMNRIESQLNSLCNGPVRIFPSDDKCEGLGSSEDEQENSGGEMEPPEIDPRAEDRELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQYMVMDGLHPPNGALYMDSHYLADGHYRLGP 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3066712 3069247 - Bpe008314.1 Bpe02g00473 98622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00473 363 ProSiteProfiles 'Homeobox' domain profile. 265 328 IPR001356 GO:0003677
Bpe02g00473 363 SUPERFAMILY Homeodomain-like 266 342 IPR009057 -
Bpe02g00473 363 ProSiteProfiles ELK domain profile. 245 265 IPR005539 GO:0003677
Bpe02g00473 363 SMART HOX_1 267 332 IPR001356 GO:0003677
Bpe02g00473 363 Pfam Homeobox KN domain 285 324 IPR008422 GO:0003677|GO:0006355
Bpe02g00473 363 Gene3D - 270 332 - -
Bpe02g00473 363 Pfam KNOX1 domain 104 146 IPR005540 GO:0003677|GO:0005634
Bpe02g00473 363 Pfam ELK domain 245 266 IPR005539 GO:0003677
Bpe02g00473 363 SMART KNOX1_2 103 147 IPR005540 GO:0003677|GO:0005634
Bpe02g00473 363 CDD homeodomain 277 329 IPR001356 GO:0003677
Bpe02g00473 363 ProSitePatterns 'Homeobox' domain signature. 303 326 IPR017970 GO:0000981|GO:0006355
Bpe02g00473 363 SMART ELK_2 245 266 IPR005539 GO:0003677
Bpe02g00473 363 SMART KNOX2_2 152 203 IPR005541 GO:0003677|GO:0005634
Bpe02g00473 363 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 1 355 - -
Bpe02g00473 363 MobiDBLite consensus disorder prediction 212 240 - -
Bpe02g00473 363 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 1 355 - -
Bpe02g00473 363 Pfam KNOX2 domain 158 202 IPR005541 GO:0003677|GO:0005634
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00473 Bpe04g00135 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00025 Bpe-Chr1:224535 Bpe02g00473 Bpe-Chr2:3066712 5.76E-90 dispersed
Bpe02g00473 Bpe-Chr2:3066712 Bpe08g00017 Bpe-Chr8:128311 4.10E-92 dispersed
Bpe02g00473 Bpe-Chr2:3066712 Bpe04g00135 Bpe-Chr4:914907 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20886 PF03791 KNOX2 1.40E-24 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00473 - - tcc:18591910 540.036