Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00477 ATGGAAAAGGATTCCCTGAAGAGCTCTAATCATGACAACACCACTAGCAACAACGTCAACACTTTTGGTAATAGAACCGGAGTGGATCCTTCACTGATGCCAAGAGCTAGCTCAGAGGCTAGCAGGCAAACATCGTCAACGGACTTTGGGCTGCAGTGGGGAAATCGGAAGCGTCTTAGGTGTATGAAGGTTCAGGCCAAGGCTAAGACCAAGGACGATTTTTCTTCATTTCCAGCTCAAAGGACTATATCTCGGGTAGACCGCCGTGTCGTTAGATCCGAAAGAGGTTCTCCTAATCGACCCAGCGCTAACACGAATCACAGTAATGGATATTTGAATCTCCGTCAAAGGCCTTCCTCTCCTCAGTTACCTCCTCCTCAGCTTCTACTGCCGCATGAAAAGCGTACAATTGTTTATCCAGCTTTTATTGTCTATTTCTTGCTGTGTTTTTATTTTCTATATTTTATGAGACGCATACGTACCCATCTTTCCATGTTGTGTTTTATTAGGAACTCCGAGACTGGCTCGATGAGAGGGCACAACAACGGTGGTGTGAGAGGAATTACTTCCCCGGACAGGGCTGTTCACGATAAGAAAGGAACTAATACCAACAACAACCACGGCCACAACCACAATGAAAACAATAAGTCTGCTGCTACATCAGACACGGCACCGGATAGCAAAAGAGGTGGGTCCTCATCCGGCAGTGGAGAGGCAGCGGCACAACCAATATGGCCCCCAAAGTTCGTGATTGCTTTGACGAACAAAGAGAAGGAAGAAGATTTCATGGCTATCAAGGGGTCTAAGCTACCTCAAAGACCAAAGAAGCGAGCCAAGATTATTCAACGCACCCTCAATTTGGTGAGCCCAGGTGGATGGTTATGCGATCTGACCCTCGAACGGTATGAGGTCAGAGAGAAAAAGATTACAAAAAAGGTGAAACCCAGTTTCCAGTTTTCGTCGGTGGAGACGACGTCCAACTCGATGGAACCAGAACCGGCTTCTCGACTGAAAAGGGTGTCCCAAACATGGCAGAAAAGCGGAAACTGTCCGACGGGAAGCATTCCGATACGTAGAATTAAAAAGGAAGACCTGTTAAGAGCTTCGTCTCTTGATCGGTTCGGCAGAAAAATCTATTCTCCGTCGTTATCTGCATCAAAGGAATCATCAATTAAGAATAACCCCAGATTTCACCCTTCTATCAAATTAGGACAAGAAACAGCAATTCTCTTCACATTAGGGTACAACTACATAGGAGCCGTAGGAGACCTTAATATTTGGAACCCATCACTTGGATCAGACAGCGATTTCTCAGGAGCTCAAGTCTGGCTTAAAAATGGACCAAGTGAAGGATTTGAAAGTGTAGAAGCAGGCTGGGTGGTAAACCCATCGTTGTACGGAGATAGACGTACTCGGCTATCCATTTATTGGACAGTGGACTCCTACAGATCAACGGGGTGTTTTGACCTAACTTGCAGTGGGTTTATCCAAACAGACCCTCATATCGCCCTTGGTACAGCCTTAGACACCATCTCCGGCGAAGGGGGAGAGCAGTATGTCTTGCCAGTTGCCCTGACCTTGGATGCCTACTCGGGCAATTGGTGGTTGATATTCGGAAACGACACTCTCCTGGGATACTGGCCAGGAAATCTATTTGGATATATAAACCACAGTGCAACTCTGGTGGAATGGGGAGGAGAAGTTTTCAGCTCAAATCTAAGTATGAGTCCTCACACGACGACTGCGATGGGGAGTGGAAATTTTGGGTCGTATCTGTTCGGGAGTGCATGTTTCGTAATGCGACCAAGAATCATGGATTACTCTCTTGCTCTGAAGTATCCAAGGAATGTTTTCACCTACGCAGACGAGCCTTACTGTTACAATGGTTTTAATTACCAGATAGGTTATACTACTGAACCTGTCTTCTTCTTTGGAGGACCTGGTCAAAACCATCTCTCCGGAAAAGGAATATATAAAATTGATCGTGTTCATGACAAACTGAAGCTTCTTAATAAGCCGCCGCCCATCAGAACTATCCATAGTAAAGATGGTGATATTATTGACTGCGTTGATATTTACAAACAGCTTGCGTTTGACCATCCTGCTCTAAAGGACCACAAAATCCAAATGAAACCCAGTTTCCAGTTTCCGGAGGAGACGAAATCCGACTCAAAGGAACCGGAACTGGCTTATCGGTGGACAAAGGTGTCTCAAACATGGCAGAAAAGTGGAGGGTGTCCACAGGGAAGCATTCCGATTTGCAGAGTTCGAAAGGAAGACTTGTTGAGAGCTCCATCTCTTGATCGGTTCGGCAAGAAAATGTATTTGACGTCATTCTCTGCATCAAACAACACATCGATTAAGAATAACACCAGATTTCACCCTTCTATCAAAATAGGAGATGAAATCAATCGTTCTCTGATTGATGCTTTTGAAAATTGTTCATCAAATCATGCAGCTATCCTGGTCTCAGCAGGGGACAACTACATGGGAGCTGTAGCAGACCTTAACATTTGGAACCCATCACTTAGATCAGACTATGATTTCTCAGGAGCTCAAGTCTGGCGTAAGAATGGACCAAGTGATGGATTTGAAAGTGTGGAAGCAGGCTGGGTGGATGGTTTTTCAGACCAAACTTCCTATAACTCTTTTCGATTACATCTAGAAACCTCAATTTTCTAA 2682 45.08 MEKDSLKSSNHDNTTSNNVNTFGNRTGVDPSLMPRASSEASRQTSSTDFGLQWGNRKRLRCMKVQAKAKTKDDFSSFPAQRTISRVDRRVVRSERGSPNRPSANTNHSNGYLNLRQRPSSPQLPPPQLLLPHEKRTIVYPAFIVYFLLCFYFLYFMRRIRTHLSMLCFIRNSETGSMRGHNNGGVRGITSPDRAVHDKKGTNTNNNHGHNHNENNKSAATSDTAPDSKRGGSSSGSGEAAAQPIWPPKFVIALTNKEKEEDFMAIKGSKLPQRPKKRAKIIQRTLNLVSPGGWLCDLTLERYEVREKKITKKVKPSFQFSSVETTSNSMEPEPASRLKRVSQTWQKSGNCPTGSIPIRRIKKEDLLRASSLDRFGRKIYSPSLSASKESSIKNNPRFHPSIKLGQETAILFTLGYNYIGAVGDLNIWNPSLGSDSDFSGAQVWLKNGPSEGFESVEAGWVVNPSLYGDRRTRLSIYWTVDSYRSTGCFDLTCSGFIQTDPHIALGTALDTISGEGGEQYVLPVALTLDAYSGNWWLIFGNDTLLGYWPGNLFGYINHSATLVEWGGEVFSSNLSMSPHTTTAMGSGNFGSYLFGSACFVMRPRIMDYSLALKYPRNVFTYADEPYCYNGFNYQIGYTTEPVFFFGGPGQNHLSGKGIYKIDRVHDKLKLLNKPPPIRTIHSKDGDIIDCVDIYKQLAFDHPALKDHKIQMKPSFQFPEETKSDSKEPELAYRWTKVSQTWQKSGGCPQGSIPICRVRKEDLLRAPSLDRFGKKMYLTSFSASNNTSIKNNTRFHPSIKIGDEINRSLIDAFENCSSNHAAILVSAGDNYMGAVADLNIWNPSLRSDYDFSGAQVWRKNGPSDGFESVEAGWVDGFSDQTSYNSFRLHLETSIF 893
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3090868 3105124 - Bpe008318.1 Bpe02g00477 98626

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00477 893 Pfam Neprosin 435 647 IPR004314 -
Bpe02g00477 893 Pfam Protein of unknown function (DUF1639) 253 302 IPR012438 -
Bpe02g00477 893 MobiDBLite consensus disorder prediction 10 27 - -
Bpe02g00477 893 MobiDBLite consensus disorder prediction 85 127 - -
Bpe02g00477 893 PANTHER ASLB (DUF239)-RELATED 313 652 - -
Bpe02g00477 893 PANTHER ASLB (DUF239)-RELATED 662 872 - -
Bpe02g00477 893 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 662 872 - -
Bpe02g00477 893 Pfam Neprosin activation peptide 678 791 IPR025521 -
Bpe02g00477 893 Pfam Neprosin activation peptide 324 393 IPR025521 -
Bpe02g00477 893 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 313 652 - -
Bpe02g00477 893 MobiDBLite consensus disorder prediction 175 241 - -
Bpe02g00477 893 MobiDBLite consensus disorder prediction 205 239 - -
Bpe02g00477 893 MobiDBLite consensus disorder prediction 1 49 - -
Bpe02g00477 893 MobiDBLite consensus disorder prediction 97 118 - -
Bpe02g00477 893 Gene3D - 430 544 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00477 - - - cit:102609293 559.296
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00477 Bpe-Chr2:3090868 Bpe04g00133 Bpe-Chr4:893369 5.80E-143 dispersed
Bpe08g01176 Bpe-Chr8:13515100 Bpe02g00477 Bpe-Chr2:3090868 1.01E-08 dispersed
Bpe11g00956 Bpe-Chr11:7102622 Bpe02g00477 Bpe-Chr2:3090868 2.19E-07 dispersed
Bpe13g01301 Bpe-Chr13:18150735 Bpe02g00477 Bpe-Chr2:3090868 1.53E-11 dispersed
Bpe02g00477 Bpe-Chr2:3090868 Bpe08g00324 Bpe-Chr8:1915110 7.03E-34 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g49 Blo01g01477 . . . . Bpe02g00477 . . Cmo05g00114 . . Cma05g00108 . . Sed08g1753 . . Bhi04g00486 Tan02g1660 Cmetu03g1286 . Hepe08g1375 . Lcy13g2171 Cla05g01813 Cam05g1937 Cec05g1950 Cco05g2011 Clacu05g1929 Cmu05g1811 Cre05g1937 Cone4ag1646 . Cone17ag0913 . Lsi04g01441 . . . . . . . . . . . . Cmo01g01758 . . . Car01g01365 Car05g00093 Cpe11g00088 Cpe02g00291 Bhi09g03178 . . . Hepe01g1862 Mch11g0397 . . . . . . . . Lsi08g01567 Csa02g01854 Chy03g01630 Cme07g00244
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003410 0 1 1 1 1 2 3 2 2 2 1 2 3 1 2 6 2 1 3 2 2 2 1 0 0 2 1 0 0 1 47
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe02g00477 Bpe_Chr02 FPKM 29.719439 34.966221 24.133547 26.968903 34.978539 33.336491 34.833447 32.625183 29.979334 30.092878