Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00487 ATGTCGAAGATGAAACATCTGCTGAAAAAGCTTCACATAGGTGGGGGTTTGAACGAGCATCAAAGGTTGGGGGAAACCCGTCCAGTGATCAGCCCGAACCCGACTAGTAATTCAACAGTTTCATCGTCTGCGGGGTCATCGTCGACTCCGGCGTCGGTTTCTTTGGGGGCAATGGATAGGTTTGGTGTTGCTGAATCTGTCGCCGATCGGAGTTCTGAGGACTTCAATTTCTTGGAGGAGGAGTTTCAGATGCAATTGGCTTTGGCAATTAGCGCCTCAGATCCTGCTGCGAGAGAGGATCCTGAGTCAGCACAGATCGATGCCGCAAAGCGGATGAGTCTCGGCTGTTTTCCTTCCGTATCTGACAGCCATGCGTTAGTTGAACTCTTGTCGCTTCAGTATTGGAGTTACAATGTTGTAAATTATGATGAAAAAGTGTTGGATGGCTTTTATGATATACATTGCACAACCGGAAATTCATTTAGCCAAGGGAAGATGCCATTGTTGGTGGATCTTCAAGCAACTTTGGTTTCTAGTGATGTTAATTATGATGTGATTTTGGTAAATCGCATGTTTGATCTGGAGCTTCAACGGCTGGAAAGACAAGCATATATTATATCTATGGATTACAGTGACTCAAATGACAGAATCATATTCAGTGGCCTTATTCAAAAAATTGCTAATATTGTTGTTAATAAAATGGGTGGTCCCGTTGACGATGCTGATGAAATGTCCAAAAGATGGAAAGCCAGGAGTTTTGAGTTGCGTAGTTCTCTCAAAACTAATATTTTACCCCTCGGTCTCCTTGACTTTGGACTTTCGCGCCATAGAGCCCTCCTTTTTAAGGTACTAGCTGATAGGATTAATCTTCCTTGTATGCTGGTCAAAGGAAGCCACTATATTGGCACAGATGATGGGGCTGTAAACTTGATTAAAGTGGATGGAGAAAGTGAATACATTATTGATTTGATGGGTGCTCCTGGTACGCTAATCCCATCTGAGCTACCCAGCAGTCAACTACCAAACTCTGGATTAGATGACATGAGAATCAAAGAAATGCCAATAAGTGAACCAACTGAGGAAATTTTATGCAATCGCAATAGAGTTACTGAAATTGGTAACCTAACGTCTAATGAAGCATCCTCATTTGGAGGTACAAAATCAATCAAGAATTGCAGAGATTCTGCTCTTCAAATTCAAGATGAGATTGATGATGGGTTTGGAGAGCTTTGTGAGTTGCAAAATAACCCAGAGAGCACATTAGGTATCTGCGGAAAAAGATCTTCTGCCCAAAAGAAGAAAGTTAAAAATGTTTCCAAGTATGTAATATCTGCAGCAAAGAATCCAGAATTTGCTCAAAAACTACATGCTGTTTTGTTAGAGAGTGGCGCATTTCCTCCTCCTGATTTGTTTGCAGATATAGACTCACAAGGCTCTTTTGAAACCAAAGAGCTACAGCAAATCCATTCATTCAATGGAAAAGATGTTGATATATGTCAGAGCAAGTCCCAAGACTTGTCAGCAAGCGATGATCAGCCACTTGCTTCTAGTATAAACGAGTTGCTAGACAATGTTCAATTTGAAAGGAAACCAAAACGGTGTGTTGAGATATTAGTTGAACAACAAAGAGAATCGGATCTGTGGAATCATGACGTTTCTCGATGTGGCACTACAAGTGAGAATTTTATGCCTATGGGTGGTGGAATCTATGAACGGATCCAAAGAGATGCTATCGGTGGAGAAACTGCTGGAATAATTGCAAAGGCTACTCATCAAGAATACAAGGACGAGCCTTCCACGATTGCCAACACCAGCTCTCGTCAAAGACATCAGGAGCTAGCCTGGAGTGTCAATAACCAATTCATGGATGGTATTGAAAAACTTCCTAATCAAATTGAGGCAGGCAATGCATCAGAAAAGACGAAAATGATGGATGCCAGTGGTATGCATATTGCTTGTGATGGTCATGCTGAGAATGTTGGCCAAGTGTTGAATGAGGTTGCAGAATGGGAAATTCCATGGGAGAATATTAACATTGGTGAACGTATTGGCATTGGTTCATATGGTGAGGTCTATAGAGCGGATTGGAACAGTACTGATGTCGCTGTGAAGAAGTTTTTGGACCAAGATCTTTCTGGTGATGCATTGGCTCAGTTAAGGACTGAAGTTGAAATCATGTTAAGACTGAGGCATCCCAATGTTGTGCTTTTTATGGGAGCGGTTACACGTCCTCCACATTTCTCTATCCTGACAGAGTTTCTTCCGAGGGGAAGTTTGTATAGGTTGCTGCATCGGTCCAACTCCCAACTTGATGAGAAGAGAAGGTTGAGAATGGCTCTTGACGTGTGCAATTTGTTTGAAAATATTTTTATTTATTTACAGGCCAAGGGAATGAATTATTTGCACACAAGTCATCCAACCATTGTTCATCGAGATTTAAAGTCTCCAAATCTCCTTGTTGATAAAAACTGGGTTGTTAAGGTTTGTGATTTTGGTTTGTCACGCATAAAGCTCCATACTTTTCTTTCTTCGAAGTCCACTGCTGGAACGGTACTTATAAGCATGATTTTTCTTAAATGTGATATGATATTAATTTGGCTTGATGAATTGCAGCCGGAATGGATGGCCCCAGAAGTTTTGAGGAACGAGCCAGCTAACGAGAAGTGCGATGTGTACAGTTTTGGTGTGATATTGTGGGAGTTGGCTACTTGCTCTATACCATGGAAAGGTTTGAACCCAATGCAAGTTGTGGGAGCTGTTGGATTCCAAGATAGGCGTTTGGAGATTCCAGATTATGTGGATCCAACTGTTGCACAAATCATGTGTGATTGTTGGCGAACGGAGACACACTTGAGGCCTTCGTTCTCTCAACTTATGCTCCGTCTGAGGCGACTTCAGCGTCTGGTTGTCAATTCTTGA 2919 41.97 MSKMKHLLKKLHIGGGLNEHQRLGETRPVISPNPTSNSTVSSSAGSSSTPASVSLGAMDRFGVAESVADRSSEDFNFLEEEFQMQLALAISASDPAAREDPESAQIDAAKRMSLGCFPSVSDSHALVELLSLQYWSYNVVNYDEKVLDGFYDIHCTTGNSFSQGKMPLLVDLQATLVSSDVNYDVILVNRMFDLELQRLERQAYIISMDYSDSNDRIIFSGLIQKIANIVVNKMGGPVDDADEMSKRWKARSFELRSSLKTNILPLGLLDFGLSRHRALLFKVLADRINLPCMLVKGSHYIGTDDGAVNLIKVDGESEYIIDLMGAPGTLIPSELPSSQLPNSGLDDMRIKEMPISEPTEEILCNRNRVTEIGNLTSNEASSFGGTKSIKNCRDSALQIQDEIDDGFGELCELQNNPESTLGICGKRSSAQKKKVKNVSKYVISAAKNPEFAQKLHAVLLESGAFPPPDLFADIDSQGSFETKELQQIHSFNGKDVDICQSKSQDLSASDDQPLASSINELLDNVQFERKPKRCVEILVEQQRESDLWNHDVSRCGTTSENFMPMGGGIYERIQRDAIGGETAGIIAKATHQEYKDEPSTIANTSSRQRHQELAWSVNNQFMDGIEKLPNQIEAGNASEKTKMMDASGMHIACDGHAENVGQVLNEVAEWEIPWENINIGERIGIGSYGEVYRADWNSTDVAVKKFLDQDLSGDALAQLRTEVEIMLRLRHPNVVLFMGAVTRPPHFSILTEFLPRGSLYRLLHRSNSQLDEKRRLRMALDVCNLFENIFIYLQAKGMNYLHTSHPTIVHRDLKSPNLLVDKNWVVKVCDFGLSRIKLHTFLSSKSTAGTVLISMIFLKCDMILIWLDELQPEWMAPEVLRNEPANEKCDVYSFGVILWELATCSIPWKGLNPMQVVGAVGFQDRRLEIPDYVDPTVAQIMCDCWRTETHLRPSFSQLMLRLRRLQRLVVNS 972
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3147429 3155760 - Bpe008326.1 Bpe02g00487 98636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00487 972 SMART serkin_6 677 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g00487 972 ProSiteProfiles Protein kinase domain profile. 677 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g00487 972 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 67 972 - -
Bpe02g00487 972 ProSitePatterns Serine/Threonine protein kinases active-site signature. 808 820 IPR008271 GO:0004672|GO:0006468
Bpe02g00487 972 Gene3D Phosphorylase Kinase; domain 1 670 754 - -
Bpe02g00487 972 SUPERFAMILY Protein kinase-like (PK-like) 663 959 IPR011009 -
Bpe02g00487 972 MobiDBLite consensus disorder prediction 15 51 - -
Bpe02g00487 972 MobiDBLite consensus disorder prediction 28 51 - -
Bpe02g00487 972 PANTHER SERINE-THREONINE PROTEIN KINASE 67 972 - -
Bpe02g00487 972 Pfam Protein kinase domain 679 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g00487 972 ProSitePatterns Protein kinases ATP-binding region signature. 683 705 IPR017441 GO:0005524
Bpe02g00487 972 CDD STKc_MAP3K-like 683 956 - -
Bpe02g00487 972 Gene3D Transferase(Phosphotransferase) domain 1 755 971 - -
Bpe02g00487 972 Pfam Ethylene-responsive protein kinase Le-CTR1 128 331 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00487 Bpe02g01142 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00487 Bpe-Chr2:3147429 Bpe05g00266 Bpe-Chr5:15618203 2.95E-71 dispersed
Bpe02g00487 Bpe-Chr2:3147429 Bpe15g00509 Bpe-Chr15:16319146 1.03E-74 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63161 PF00069 Pkinase 3.70E-42 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00487 K04424 - csv:101214554 1000.35