Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00495 ATGGGTGCTTCAGGAAAATGGGTCAAATCTCTTATGGGTCTCAGAAAGCCAGACAAGGAAGAACAAGAAAAGCAGTGTGGTAAGAGTACGAAATGGAAGCTATGGAGAAACCCATCAAGCGATCCAGGCTCTTCTTGGAAAGGCTTCAAAGGAGGTCGTAGAGCAGCGTCTGAGGGCTCAGATTCTCCGCGAGCAGTTGATGCTTTTACAGCGGCCCGGGCTGCATTACTTCGAGCTCCTCCTAAAGATTTTAAGGTTGTGAGGCAAGAATGGGCGGCAATTCGGATCCAAACTGCCTTTCGTGGCTTTCTGGCAAGACGCGCGTTGCGGGCGTTGAAAGGAGTGGTGAGGCTTCAGGCTCTGGTTCGGGGTCGGCTGGTGAGAAAGCAAGCGGCCGTGACGCTGAGATGCATGCAAGCCCTTGTTCGAGTCCAGGCTCGAGTGAGGGCTCGTCGAGTAAGAATGTCTATGGAGGGTCAGGCCGTTCAACAAATAATAACCGAACATCGAACGAAGGCCGATCTCTTGAAAGAGGCTGAGTCTCAGGCAGGGTGGTGTGATAGTAGAGGAACTTTGAATGATGTAAAGGCAAAGCTGCAAATGAGGAAAGAAGGAGCTTTTAAGAGAGAGAGAGCATTTGCATACTCTCTGGCTCAAAAGCAATGGAAGTCAACTCACTCTGCCATTTCTAGAACTAATGCGCCGTTGTCGTCTGTTAAGAATCAAGAGTTTGATAAGAACAGCTGGGGATGGAGCTGGTTAGAGAGATGGATGGCTGCTAAGCCTTGGGAAACCAGGTTGATGGAACAACCTCAGGATGATTCACTACCTTCGAAGACCGTCATCGATTCTTCTTCCAGTAAACAGTCGAAAGAGGTTGAATCTTCTTGCTACATAAAAGTCAGAAAAAACAACATTTCTACTCGAATTTCTGCTAAACCTCCTCAAATAAACCAAGTTCATTGGTCCTCGTCGAGCCCGAGTTCTGATTTTCGATATGACGAGAGCTCAGCTTCGTCCTCGTTTTGCACCTCCGTAACTCCGGCTTCCTGCAACACTTTAAAGACTAGTGAAAGAACAGAAGACAGCTCGAGAAATCGTCCGAGTTACATGAACTTGACTGAGTCAACAAAAGCGAAACAGAAAAGAGGCGGTTATTTGCCTCATAGAAATCAAATGCAAACGAGGGACGAGTTCATCAAGTTCATCAACAGCTCGGCAGATTTCTCAAATGAGGATTCCAAAAGTAGTGCTGGCTCTGACCCTTCTGTCAATTTATTCAAGCCACTGGTATTTCCGAATCGATCTGGTAAGAGTGCCATGAAAGCAAGATGA 1335 47.19 MGASGKWVKSLMGLRKPDKEEQEKQCGKSTKWKLWRNPSSDPGSSWKGFKGGRRAASEGSDSPRAVDAFTAARAALLRAPPKDFKVVRQEWAAIRIQTAFRGFLARRALRALKGVVRLQALVRGRLVRKQAAVTLRCMQALVRVQARVRARRVRMSMEGQAVQQIITEHRTKADLLKEAESQAGWCDSRGTLNDVKAKLQMRKEGAFKRERAFAYSLAQKQWKSTHSAISRTNAPLSSVKNQEFDKNSWGWSWLERWMAAKPWETRLMEQPQDDSLPSKTVIDSSSSKQSKEVESSCYIKVRKNNISTRISAKPPQINQVHWSSSSPSSDFRYDESSASSSFCTSVTPASCNTLKTSERTEDSSRNRPSYMNLTESTKAKQKRGGYLPHRNQMQTRDEFIKFINSSADFSNEDSKSSAGSDPSVNLFKPLVFPNRSGKSAMKAR 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3201970 3203787 - Bpe008334.2 Bpe02g00495 98644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00495 444 MobiDBLite consensus disorder prediction 354 395 - -
Bpe02g00495 444 ProSiteProfiles IQ motif profile. 89 117 IPR000048 GO:0005515
Bpe02g00495 444 SMART iq_5 111 132 IPR000048 GO:0005515
Bpe02g00495 444 SMART iq_5 88 110 IPR000048 GO:0005515
Bpe02g00495 444 MobiDBLite consensus disorder prediction 409 444 - -
Bpe02g00495 444 MobiDBLite consensus disorder prediction 271 288 - -
Bpe02g00495 444 ProSiteProfiles IQ motif profile. 113 140 IPR000048 GO:0005515
Bpe02g00495 444 Pfam IQ calmodulin-binding motif 113 130 IPR000048 GO:0005515
Bpe02g00495 444 Pfam IQ calmodulin-binding motif 91 110 IPR000048 GO:0005515
Bpe02g00495 444 MobiDBLite consensus disorder prediction 409 423 - -
Bpe02g00495 444 MobiDBLite consensus disorder prediction 1 63 - -
Bpe02g00495 444 MobiDBLite consensus disorder prediction 12 30 - -
Bpe02g00495 444 PANTHER IQ-DOMAIN 5-RELATED 1 443 - -
Bpe02g00495 444 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 443 - -
Bpe02g00495 444 MobiDBLite consensus disorder prediction 269 288 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00495 Bpe-Chr2:3201970 Bpe14g00783 Bpe-Chr14:5953139 3.24E-30 dispersed
Bpe01g00879 Bpe-Chr1:19093348 Bpe02g00495 Bpe-Chr2:3201970 3.34E-30 transposed
Bpe03g00849 Bpe-Chr3:28308222 Bpe02g00495 Bpe-Chr2:3201970 1.09E-24 transposed
Bpe11g00883 Bpe-Chr11:6512334 Bpe02g00495 Bpe-Chr2:3201970 4.06E-55 transposed
Bpe04g01589 Bpe-Chr4:22157407 Bpe02g00495 Bpe-Chr2:3201970 8.55E-38 transposed
Bpe04g01873 Bpe-Chr4:23845940 Bpe02g00495 Bpe-Chr2:3201970 1.38E-35 transposed
Bpe02g00495 Bpe-Chr2:3201970 Bpe02g01543 Bpe-Chr2:18514597 6.27E-91 wgd
Bpe02g00495 Bpe-Chr2:3201970 Bpe04g00122 Bpe-Chr4:834040 6.54E-126 wgd
Bpe02g00495 Bpe-Chr2:3201970 Bpe06g00782 Bpe-Chr6:18055828 9.09E-65 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00495 - - qsu:112015613 548.51