Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g00502 | ATGGAAAACGGTGCTTCGCCTAATGCGCTTACGGTTGAGGATATCTTTCGGGATCTTAAAGGTCGCAGGGCTGGCATGATTAAAGCTCTTACTACTGATTTTCTGAATGCAGAGAGGGAAAACCTCTGCCTTTATGGATATCCCGATGGGAATTGGGCTGTCAGTTTACCTGCCGAAGAAGTGCCTTCTGAGCTTCCAGAACCTGCACTGGGAATTAATTTTGCCAGAGATGGGATGCATGCGAAGGAGTGGGCATCGTTGGTTGCTGTCCACAGTGATTCATGGTTACTTTCTGTAGCCTTTTACTACGGTGCTAGGTTTGAATTTCGTCAAACTGATCGGATGCGTCTTTTTGATATGATAAACGATCTTCCAACAATATTTGAGGTTCTAAAGGAGTTAGCGGAGAAACAAAAGAAGACGAAGGCATCAGTTTCAAAACACAGCCGCAACAAGTTTATATCCAAATCAAAGATTTTCGCTCCTCTGCCAAATTTTGCATTTTGTTGGCTGACAATGCAGCAATGTACTGATTTTCAGGAAGAACTTTCACTGCCAATGCAAGTCGTGGATGAGGAAGATGGTGATGGACAGGAAGAAACTTTATGTGGAGCCTGTGATGAGAACGATGGAACTGATGAATTCTGGATCTGCTGTGACGCGTGTGAGAAGTGGTTCCATGGAAAATGTGTTAAGATCACCGCAGCAAGAGCAGAGCACATCAAGCATTACAAATGCCCGTCTTGCAGTAACAAGAGACCACGACAATAA | 771 | 44.23 | MENGASPNALTVEDIFRDLKGRRAGMIKALTTDFLNAERENLCLYGYPDGNWAVSLPAEEVPSELPEPALGINFARDGMHAKEWASLVAVHSDSWLLSVAFYYGARFEFRQTDRMRLFDMINDLPTIFEVLKELAEKQKKTKASVSKHSRNKFISKSKIFAPLPNFAFCWLTMQQCTDFQEELSLPMQVVDEEDGDGQEETLCGACDENDGTDEFWICCDACEKWFHGKCVKITAARAEHIKHYKCPSCSNKRPRQ | 256 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3263991 | 3265646 | - | Bpe008342.2 | Bpe02g00502 | 98651 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g00502 | 256 | ProSitePatterns | Zinc finger PHD-type signature. | 203 | 249 | IPR019786 | - | |
Bpe02g00502 | 256 | ProSiteProfiles | Zinc finger PHD-type profile. | 200 | 252 | IPR019787 | - | |
Bpe02g00502 | 256 | SUPERFAMILY | FYVE/PHD zinc finger | 192 | 254 | IPR011011 | - | |
Bpe02g00502 | 256 | CDD | PHD_AL_plant | 202 | 252 | IPR044104 | - | |
Bpe02g00502 | 256 | SMART | PHD_3 | 202 | 250 | IPR001965 | - | |
Bpe02g00502 | 256 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 193 | 251 | IPR013083 | - | |
Bpe02g00502 | 256 | Pfam | Alfin | 11 | 132 | IPR021998 | GO:0006355|GO:0042393 | |
Bpe02g00502 | 256 | Pfam | PHD-finger | 203 | 252 | IPR019787 | - | |
Bpe02g00502 | 256 | PANTHER | CPG BINDING PROTEIN | 8 | 255 | IPR045104 | GO:0006355|GO:0042393 | |
Bpe02g00502 | 256 | PANTHER | ALFIN-LIKE TRANSCRIPTION FACTOR | 8 | 255 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe02g00502 | Bpe14g00276 | CCT | |
Bpe02g00502 | Bpe14g00276 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g00502 | Bpe-Chr2:3263991 | Bpe02g02185 | Bpe-Chr2:23047068 | 2.60E-91 | dispersed | |
Bpe14g00276 | Bpe-Chr14:2783384 | Bpe02g00502 | Bpe-Chr2:3263991 | 1.82E-102 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
20889 | PF12165 | Alfin | 1.50E-54 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g00502 | - | - | csin:114296613 | 332.798 |