Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00510 ATGGCGGCTCCTGTGGTCCGTCTCTCGATCTCCTTTCCCCCCAAGCTATCCTTCTTTGACTGCTCCGCAGACAACGGCCGCCTCTTTGACTTCCGGCAATGCTTGCCCAATCGGCAACTTCGTCACCGCCCTTTCTCCTTCCCTCGACAGCACCACTGTTATCGGCGACTGAACAAGCATACTGTCCGCATTTCTAATGCCCTCGAGGTTCGACCTTCGTCGCAAAATGCAGCGTTTCAACCAGAACGGCCAGAAGAGCTGTCGGTCCTCCTCGACGTTTCCGGAATGATGTGCGGTGCTTGTGTTTCTCGAGTCAAATCCGTTCTTTCTTCCGACGATCGGGTTGATTCTGTGGTAGTCAACATGTTGACCGAGACGGCGGCAATTCGTTTGAAACCGCAGATGGTCGCGGATTCGGCCACGGAAGTGGCAGAAAGACTTGCTCGAAAATTGACGGAGTGTGGCTTTCCGACGAATCAGAGGGTTTCCAGGATGGGAGTCTCGGATAATGTGAAAAAGTGGAAAGAAATGGTGAAGAAGAAGGAAATTATGCTCGACGAGAGCCAGAATCGGGTGGCTTTTGCATGGACTTTGGTAGCATTATGTTGTGCTTCGCATGCTTCACACATATTGCATTCTCTTGGTATTCACATTGCACATGGATCATCGTGGGATATACTTCAAAACTCGTATCTAAAGGGCAGCTTGGCTTTGGGAGCTCTGTTAGGACCGGGACGAGTGATATTTACTGCAGACTTACTCTTTGATGGTCTGAGGGCATTTAAGAAGGGATCGCCAAATATGAATTCGCTTGTAGGCTTTGGTGCTGTTGCTGCTTTTACGATCAGCATGGTCTCACTTCTTAACTCTGGGCTAGCATGGGATGCCTCCTTCTTTGATGAACCGCTTCTCATGGAAAAATCTTACTTTTTTAGTATGCAGGTCATGCTTCTTGGTTTTGTGCTCCTTGGACGTTCACTGGAAGAAAAGGCAAGGATCAGGGCATCTAGTGACATGAATGAACTTCTGTCATTATTATCCACTCGCTCACGACTTGTAATTGCCTCCCCAGAAAGTGATTCCTCCTCCGAGACTGTACTCTGCCCCGATGCTATTTGCATTGGTGTTCAAACTGATGATATACGAGTTGGAGATTCAATTTTGGTTTTACCGGGAGAGACCATACCTGTGGATGGAAAAGTTCTTGCAGGAAGAAGCGTAGTGGACGAATCCATGCTCACAGGAGAATCTCTACCTGTATTTAAGGACAAAGGCATTATGGTCTCTGCTGGAACAATAAATTGGGATGGTCCTTTGAGAATCGAAGCCTCTTCAACTGGCTCCAATTCAACTATATCGAAGATTATTCGCATGGTTGAGGATGCTCAAGGTCGTGAAGCACCAATTCAAAGACTTGCAGATTCTATAGCTGGACCGTTTGTGTACACTGTACTAACTCTCTCAGCAGCAACGTTTGCCTTTTGGTATGTGTACTACTTTGGGACCCATATTTTTCCAGATGTTTTGATGAATGATATTGCTGGACCAGATGGAGATCCATTACTTTTAAGCTTGAAACTTGCGGTGGATGTCTTGGTTGTTTCTTGCCCATGTGCACTTGGACTTGCCACTCCCACGGCTATCCTTGTTGGCACTTCCCTAGCAGGGGCAAGACAAGGACTTCTTATAAGAGGAGGAGATGTATTAGAGCGTTTGGCAGGCATTAATTGTGTTGCTCTTGACAAGACAGGGACTCTTACTGAAGGAAAACCATCTGTTTCTGCTGTTGCTTCCTATGCCTATGCGGAATCAGATATTCTCAAAATTGCTGCTGCAGTGGAGAAGACTGCGTCACATCCAATCGCAAAAGCCATAGTAGATAAAGCAGAGTTGTTGACTTTGACTTTTCCAATTACCAAAGGGCAAATAGTGGAACCTGGTTTTGGAACTTTGGCAGAAGTAGAAGGGAAGTTGGTTGCAGTTGGTTCTTTAGAATGGGTGCATGAAAGGTTCCAAGAAAAGGCAACGCTTTCTGATCTTAAGAAACTAGATCATAATGTGCATCAGTCATTAGAAGGATCGACCTTATCAAATAATTCGAAAACAGTTGTTTATGTTGGACGAGAAGGAGAAGGAATTATCGGTGCTATTATGATTTGTGATAATTTGCGCCAGGATGCTGCATCTACTGTCACAAGGCTCCAGCAGAAGGGTATTAGAACTATTCTCTTATCCGGAGACAGGGAAGAGGCAGTTGCAAATATAGCGGAAAAGATTGGACTACAAAAAGAATATGTTGCATCCTCGACTCCACAGCTAAAATCTGAAGTTATTTCCTCTCTTAAATTGGCAGGACATCAAGTTGCCATGGTAGGCGATGGCATCAACGATGCGCCATCTTTGGCTCTTGCAGATGTTGGAATTGCCTTGCAGATTGAAGCACAGGAGAATGCCGCTTCCAATGCAGCGTCAATTTTGCTTCTTGGGAACAGATTATCACAGGTGGTAGATGCTTTGGAACTTGCGCAAGCAACAATGGCTAAAGTGTACCAAAATCTATCATGGGCAATAGCCTACAATATGATTGCCATTCCAATTGCTGCCGGAGTACTACTTCCCCAGCTTGATTTTGCCATGACGCCATCTCTTTCTGGCGGACTCATGGCTTTGAGCTCAATTTTTGTTGTCTCCAACTCACTACTTCTCCAGCTTCATAGATTCGAGAGGAGCAAGTAG 2736 45.69 MAAPVVRLSISFPPKLSFFDCSADNGRLFDFRQCLPNRQLRHRPFSFPRQHHCYRRLNKHTVRISNALEVRPSSQNAAFQPERPEELSVLLDVSGMMCGACVSRVKSVLSSDDRVDSVVVNMLTETAAIRLKPQMVADSATEVAERLARKLTECGFPTNQRVSRMGVSDNVKKWKEMVKKKEIMLDESQNRVAFAWTLVALCCASHASHILHSLGIHIAHGSSWDILQNSYLKGSLALGALLGPGRVIFTADLLFDGLRAFKKGSPNMNSLVGFGAVAAFTISMVSLLNSGLAWDASFFDEPLLMEKSYFFSMQVMLLGFVLLGRSLEEKARIRASSDMNELLSLLSTRSRLVIASPESDSSSETVLCPDAICIGVQTDDIRVGDSILVLPGETIPVDGKVLAGRSVVDESMLTGESLPVFKDKGIMVSAGTINWDGPLRIEASSTGSNSTISKIIRMVEDAQGREAPIQRLADSIAGPFVYTVLTLSAATFAFWYVYYFGTHIFPDVLMNDIAGPDGDPLLLSLKLAVDVLVVSCPCALGLATPTAILVGTSLAGARQGLLIRGGDVLERLAGINCVALDKTGTLTEGKPSVSAVASYAYAESDILKIAAAVEKTASHPIAKAIVDKAELLTLTFPITKGQIVEPGFGTLAEVEGKLVAVGSLEWVHERFQEKATLSDLKKLDHNVHQSLEGSTLSNNSKTVVYVGREGEGIIGAIMICDNLRQDAASTVTRLQQKGIRTILLSGDREEAVANIAEKIGLQKEYVASSTPQLKSEVISSLKLAGHQVAMVGDGINDAPSLALADVGIALQIEAQENAASNAASILLLGNRLSQVVDALELAQATMAKVYQNLSWAIAYNMIAIPIAAGVLLPQLDFAMTPSLSGGLMALSSIFVVSNSLLLQLHRFERSK 911
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3332753 3348190 + Bpe008350.1 Bpe02g00510 98659

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00510 911 Pfam Heavy-metal-associated domain 91 156 IPR006121 GO:0046872
Bpe02g00510 911 SUPERFAMILY Calcium ATPase, transduction domain A 371 459 IPR008250 -
Bpe02g00510 911 ProSiteProfiles Heavy-metal-associated domain profile. 88 160 IPR006121 GO:0046872
Bpe02g00510 911 SFLD Haloacid Dehalogenase 562 844 - -
Bpe02g00510 911 CDD HMA 91 157 IPR006121 GO:0046872
Bpe02g00510 911 SUPERFAMILY HMA, heavy metal-associated domain 85 137 IPR036163 GO:0046872
Bpe02g00510 911 ProSitePatterns E1-E2 ATPases phosphorylation site. 581 587 IPR018303 -
Bpe02g00510 911 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 362 883 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe02g00510 911 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 581 670 IPR023299 GO:0000166
Bpe02g00510 911 Gene3D - 331 463 - -
Bpe02g00510 911 Coils Coil 171 191 - -
Bpe02g00510 911 PRINTS P-type cation-transporting ATPase superfamily signature 579 593 - -
Bpe02g00510 911 PRINTS P-type cation-transporting ATPase superfamily signature 791 810 - -
Bpe02g00510 911 PRINTS P-type cation-transporting ATPase superfamily signature 409 423 - -
Bpe02g00510 911 PRINTS P-type cation-transporting ATPase superfamily signature 737 747 - -
Bpe02g00510 911 PANTHER ATP7, ISOFORM B 49 905 - -
Bpe02g00510 911 SUPERFAMILY Calcium ATPase, transmembrane domain M 317 573 IPR023298 -
Bpe02g00510 911 SUPERFAMILY HAD-like 578 899 IPR036412 -
Bpe02g00510 911 Gene3D - 570 842 IPR023214 -
Bpe02g00510 911 SFLD p-type atpase 562 844 IPR044492 -
Bpe02g00510 911 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 268 902 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bpe02g00510 911 Gene3D - 590 723 IPR023299 GO:0000166
Bpe02g00510 911 Pfam E1-E2 ATPase 376 554 - -
Bpe02g00510 911 Pfam haloacid dehalogenase-like hydrolase 575 805 - -
Bpe02g00510 911 Gene3D - 83 162 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00510 K17686 copA, ctpA, ATP7; P-type Cu+ transporter [EC:7.2.2.8] - qsu:111997859 1214.91
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00510 Bpe-Chr2:3332753 Bpe08g01488 Bpe-Chr8:15588049 8.01E-109 dispersed
Bpe05g00438 Bpe-Chr5:18804229 Bpe02g00510 Bpe-Chr2:3332753 5.26E-13 dispersed
Bpe07g00337 Bpe-Chr7:2649696 Bpe02g00510 Bpe-Chr2:3332753 6.20E-12 dispersed
Bpe02g00510 Bpe-Chr2:3332753 Bpe05g00417 Bpe-Chr5:18554382 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g165 Blo01g01443 . Bda01g00641 . . Bpe02g00510 . . . . . . Car09g00315 . . . Cpe06g00260 . . . . . . . Cla05g01629 Cam05g1738 Cec05g1746 Cco05g1803 Clacu05g1729 Cmu05g1614 Cre05g1742 . . Cone17ag0948 . Lsi04g01385 . . . . . . . . . . . . . Cmo09g00365 Cma09g00366 . . Car05g00660 . . Bhi09g03080 . . . . . . . . . . . . . . . . Cme07g00175
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010516 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 32
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe02g00510 Bpe_Chr02 FPKM 9.609005 10.169623 6.903699 7.558481 17.882484 19.885206 19.008602 18.113747 19.366095 17.537285