Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00511 GAAGGAGCAACTTTGTTGGAAATAAAGAAGTGCTTTAAGGACGTGGACAATGTCCTATACGACTGGACTGACTCACCCTCTTCAGACTATTGTGTTTGGAGAGGTATTGCCTGCGACAATGTCACTTTCAGTGTAGTCTCACTCAATCTCTCAGGTTTAAACCTCGATGGAGAAATTTCACCTGCAATTGGAAATCTTAGAAGCCTGATAACCATTGACTTGAGGGGAAATCGTCTCTCTGGGCAAATTCCCGACGAGATTGGCCACTCCTCTTCTTTGAGAAATCTGGACTTGTCATACAATGAGATATATGGAGATATACCATTTTCAATCTCAAAACTGAAGCAACTAGAAATGATAGTTCTGAAAAACAACCGCTTGATTGGACCAATTCCTTCTACTTTATCTCAAATTCCAAATTTGAAGATATTAGATCTTGCACAGAATAATCTCAGTGGCGAAATTCCGAGGCTTCTGTACTGGAATGAAGTTTTGCAGTATCTTGGATTACGGGGAAACAATTTGGTCGGTGCTCTCTCTCCAGATATTTGTCAACTTACAGGATTGTGGTACTTTGATGTGAGAAACAATAGTTTGACTGGAAGCATTCCGCAAAGCATAGGGAATTGCACTGCCTTCCAGGTTTTAGACCTATCCTATAATCGGTTGACCGGTGAGATTCCGTTCAATATTGGTTTCCTACAAGTTGCCACTTTGTCACTACAAGCAAATCAACTTTCTGGTCAAATTCCAGCAGTCATCGGGTTGATGCAGGCCCTTGCAGTGTTAGATCTGAGCTGCAACAAGTTAAGTGGTTTGATTCCTCCTATCTTGGGAAACTTGACTTACACAGAGAAATTGTACTTGCATGGCAACATGCTTACTGGGTCCATTCCTTCAGAGCTTGGGAATATGACAAAGCTTCATTATCTGGAGCTGAACGACAATCATCTGACGGGATGTATTCCGCCAGAACTCGGGAAGCTTACTGATTTGTTTGATATTAATGTGGCGAACAATAATCTCGAAGGACCTATACCCGGCAACCTCAGTTCGTGCACAAATCTGAACAGTCTAAATGTACATGGAAATAAACTGAATGGTTCGATTCCACCTGCTCTCCAAAGGCTGGAGAGCTTGACTTATCTAAATCTCTCGTTGAACAATCTTTCGGGCTCCATTCCAATCGAGCTGTCTCGGATTGGTAACTTGGACACTTTGGATTTATCGAATAACAAAATTAGTGGGTCGATTCCTTCTTCCCTTGGCGATCTAGAACACCTCCTTAAGTTGAATTTAAGCGGAAATGATTTAACAGGATTCATTCCTGCCGAGTTTGGTAACCTGAGAAGTGTTATGATGATAGATCTTTCCGAAAATCATCTCTCGGGCCCGATTCCTCAAGAAATTAGTCAGCTTCAGAATATGTTGTCCTTGAGACTGGAAAGCAACAATCTATCTGGGGATGTGATGTCTCTAATTAACTGCCTGAGTCTAACAGAATTGAACGTATCTTATAATAACTTGGCTGGCATTATTCCGACTAGCAATAACTTCTCAAGATTCCCGTTTGACAGTTTTGTTGGAAATCCGGGTCTTTGCGGATCTTGGCGTAACTACCAATGCCATGAGTCTATGGAGAGAGTCACAATATCTAAAGCGGCAATCATCGGCATTGCTCTTGGTGGTCTCGTGATTCTTCTCGTGATTCTTTTAGCTGCATTTCGACCAAACAACGCAATTACATTTCCCGATGGAGCAGTCGATAAACCAGTTAAGTTTTCAACTCCAAAGCTGGTGATTCTGCATATGAATATGGCACTTCATGTGTATGAAGACATTATGAGAATGACCGAAAACTTGAGCGAGAAGTATATAATCGGGTACGGAGCTTCAAGTACTGTCTACAAATGCATTCTTAAAAACTGCAAACCGGTGGCCATCAAGAGACTATACTCTCACTATCCTCAGAGCATGAAAGAATTCCAAACCGAGCTCGAGACAGTTGGAAGCATCAAGCACAGAAACCTTGTCAGCCTCCAGGGCTATTCTTTCTCCCCCTACGGCAACCTTCTCTTCTACGACTTCATGGAGAACGGCAGTCTTTGGGATCTTCTTCACGGGCCAACGAAAAAGAAAAAACTTGGTTGGGACACTCGGCTGAAAATTGCACTCGGATCGGCTCAAGGGCTTTCATATCTACACCATGATTGCAGTCCGCGCATCATCCACAGGGATGTCAAATCGTCGAATATTCTTCTGGACAAGGATTTTGAGCCTCATCTTACGGATTTTGGCATTGCCAAGATTTTATGCACATCAAAGACTTATACTTCTACTTACATAATGGGAACGATCGGATATATTGACCCTGAGTATGCTCGAACCTCTCGACTCACGGAAAAATCTGATGTTTACAGTTATGGAATTGTTTTGCTCGAACTGCTGACAGGAAGAAAAGCTGTTGACAATGAGTCAAACCTCCATCATCTGATTTTATCGAAGACAGCCAATAATACTGTCATGGAAGCAGTCGATCCCGAGATTACTGCTACATGTAAGGATCTTGGAGCGGTGAAGAAAGTTTTTCAACTTGCTCTTCTATGCACGAAGAGACAGCCATTCGACCGTCCTACGATGCATGAAGTCACCCGTGTTCTTGGAAGTCTCGAGCCAGCCTTGGCCCAGCCAAAAAACAGAGGGTCTGTGCCAACTTCAAAAGTGCCTTGCTATGTCGACGAGTATGCCAATTTGAAAAAACCACACATGGTTCAATGCCCGTCAAGTACATCTGACGCCCAGCTATTCCTCAAATTTGGAGAGGTAATATCTCAGAACAGTGAGGGTTGA 2850 42.88 EGATLLEIKKCFKDVDNVLYDWTDSPSSDYCVWRGIACDNVTFSVVSLNLSGLNLDGEISPAIGNLRSLITIDLRGNRLSGQIPDEIGHSSSLRNLDLSYNEIYGDIPFSISKLKQLEMIVLKNNRLIGPIPSTLSQIPNLKILDLAQNNLSGEIPRLLYWNEVLQYLGLRGNNLVGALSPDICQLTGLWYFDVRNNSLTGSIPQSIGNCTAFQVLDLSYNRLTGEIPFNIGFLQVATLSLQANQLSGQIPAVIGLMQALAVLDLSCNKLSGLIPPILGNLTYTEKLYLHGNMLTGSIPSELGNMTKLHYLELNDNHLTGCIPPELGKLTDLFDINVANNNLEGPIPGNLSSCTNLNSLNVHGNKLNGSIPPALQRLESLTYLNLSLNNLSGSIPIELSRIGNLDTLDLSNNKISGSIPSSLGDLEHLLKLNLSGNDLTGFIPAEFGNLRSVMMIDLSENHLSGPIPQEISQLQNMLSLRLESNNLSGDVMSLINCLSLTELNVSYNNLAGIIPTSNNFSRFPFDSFVGNPGLCGSWRNYQCHESMERVTISKAAIIGIALGGLVILLVILLAAFRPNNAITFPDGAVDKPVKFSTPKLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCILKNCKPVAIKRLYSHYPQSMKEFQTELETVGSIKHRNLVSLQGYSFSPYGNLLFYDFMENGSLWDLLHGPTKKKKLGWDTRLKIALGSAQGLSYLHHDCSPRIIHRDVKSSNILLDKDFEPHLTDFGIAKILCTSKTYTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVDNESNLHHLILSKTANNTVMEAVDPEITATCKDLGAVKKVFQLALLCTKRQPFDRPTMHEVTRVLGSLEPALAQPKNRGSVPTSKVPCYVDEYANLKKPHMVQCPSSTSDAQLFLKFGEVISQNSEG 949
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3351760 3357195 + Bpe008351.1 Bpe02g00511 98660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00511 949 Gene3D Ribonuclease Inhibitor 1 162 IPR032675 -
Bpe02g00511 949 Gene3D Ribonuclease Inhibitor 163 252 IPR032675 -
Bpe02g00511 949 Gene3D Ribonuclease Inhibitor 259 545 IPR032675 -
Bpe02g00511 949 SMART serkin_6 621 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g00511 949 ProSiteProfiles Leucine-rich repeat profile. 140 162 IPR001611 GO:0005515
Bpe02g00511 949 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERECTA 1 935 - -
Bpe02g00511 949 Pfam Leucine rich repeat N-terminal domain 2 39 IPR013210 -
Bpe02g00511 949 SUPERFAMILY RNI-like 179 514 - -
Bpe02g00511 949 ProSitePatterns Protein kinases ATP-binding region signature. 627 649 IPR017441 GO:0005524
Bpe02g00511 949 SMART LRR_typ_2 377 401 IPR003591 -
Bpe02g00511 949 SMART LRR_typ_2 257 280 IPR003591 -
Bpe02g00511 949 SMART LRR_typ_2 138 162 IPR003591 -
Bpe02g00511 949 SMART LRR_typ_2 186 210 IPR003591 -
Bpe02g00511 949 SMART LRR_typ_2 66 90 IPR003591 -
Bpe02g00511 949 SMART LRR_typ_2 425 448 IPR003591 -
Bpe02g00511 949 SMART LRR_typ_2 305 329 IPR003591 -
Bpe02g00511 949 Gene3D Phosphorylase Kinase; domain 1 590 696 - -
Bpe02g00511 949 SUPERFAMILY L domain-like 5 234 - -
Bpe02g00511 949 ProSitePatterns Serine/Threonine protein kinases active-site signature. 742 754 IPR008271 GO:0004672|GO:0006468
Bpe02g00511 949 CDD STKc_IRAK 627 890 - -
Bpe02g00511 949 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 935 - -
Bpe02g00511 949 SUPERFAMILY Protein kinase-like (PK-like) 599 887 IPR011009 -
Bpe02g00511 949 Pfam Leucine rich repeat 259 318 IPR001611 GO:0005515
Bpe02g00511 949 Pfam Leucine rich repeat 403 462 IPR001611 GO:0005515
Bpe02g00511 949 ProSiteProfiles Protein kinase domain profile. 621 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g00511 949 ProSiteProfiles Leucine-rich repeat profile. 92 115 IPR001611 GO:0005515
Bpe02g00511 949 ProSiteProfiles Leucine-rich repeat profile. 403 426 IPR001611 GO:0005515
Bpe02g00511 949 Gene3D Transferase(Phosphotransferase) domain 1 697 902 - -
Bpe02g00511 949 PRINTS Leucine-rich repeat signature 401 414 - -
Bpe02g00511 949 PRINTS Leucine-rich repeat signature 260 273 - -
Bpe02g00511 949 Pfam Leucine Rich repeat 496 509 IPR001611 GO:0005515
Bpe02g00511 949 Pfam Protein kinase domain 624 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00511 Bpe-Chr2:3351760 Bpe03g00330 Bpe-Chr3:5231798 0 dispersed
Bpe01g00075 Bpe-Chr1:481054 Bpe02g00511 Bpe-Chr2:3351760 4.84E-09 transposed
Bpe03g00550 Bpe-Chr3:25763299 Bpe02g00511 Bpe-Chr2:3351760 4.13E-34 transposed
Bpe02g00511 Bpe-Chr2:3351760 Bpe04g00109 Bpe-Chr4:752715 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63162 PF00069 Pkinase 1.50E-43 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00511 K20718 - rcu:8258591 1591.63