Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00524 ATGGGCTATCTGAATTCAGTCCTATCATGTTCGAGTCAGGTTCATGCTGCCGATGAAGGACCAGTAAGCGGCGGTGGTCTCAGTTCAAATGGAAAGTTCAGCTATGGATATGCAAGTTCTCCAGGGAAACGGTCTTCAATGGAAGATTTTTATGAGACACGAATAGATGGTGTTGAAGGGGAAATAGTAGGCCTCTTTGGGGTTTTTGATGGTCATGGGGGTGCGCGGGCTGCTGAGTATGTGAAGCAAAATTTGTTTAGCAATTTGATCCAGCACCCTAAGTTCATCTCTGATACTAAATCAGCTATAACCGATGCATACATGCACACAGACTCAGAATTTCTAAAATCAGAAAACAATCAGAACAGGGATGCTGGATCAACAGCTTCTACTGCTATTTTAGTCGGTGATCGTTTGCTTGTTGCTAATGTTGGGGATTCCAGAGCCGTTATATGTCGTGGTGGAAATGCAATTGCTGTCTCCCGAGATCACAAACCTGATCAATCAGATGAACGACAACGGATTGAGGACGCTGGAGGATTCGTGGTGTGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCACGTGCTTTTGGGGATAGGCTGTTGAAGCAATATGTTGTAGCTGATCCGGAAATTCAGGAAGAAAAGATCGATAGCTCCCTTGAGTTTCTCATTCTTGCAAGTGACGGACTGTGGGATGTTGTATCTAACGAGGAGGCTGTTGCGATGATAAAACCAATTCAGGCACCGGAGGAGGCCGCAAAGAGGTTGATGCAGGAAGCATGCCAGAAAGGCAGTGCTGATAACATTACCTGTGTGGTTGTTCGTTTTATGGCGAATCAAGGCGCTTCCTCCTGCGACGCGTCTGCGTAA 882 46.37 MGYLNSVLSCSSQVHAADEGPVSGGGLSSNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKQNLFSNLIQHPKFISDTKSAITDAYMHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQSDERQRIEDAGGFVVWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDSSLEFLILASDGLWDVVSNEEAVAMIKPIQAPEEAAKRLMQEACQKGSADNITCVVVRFMANQGASSCDASA 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3410677 3414783 - Bpe008364.1 Bpe02g00524 98673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00524 293 PANTHER ALPHABET, ISOFORM E-RELATED 3 288 - -
Bpe02g00524 293 SMART PP2C_SIG_2 45 280 IPR001932 -
Bpe02g00524 293 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 3 288 - -
Bpe02g00524 293 SUPERFAMILY PP2C-like 29 280 IPR036457 -
Bpe02g00524 293 Pfam Protein phosphatase 2C 63 273 IPR001932 -
Bpe02g00524 293 CDD PP2Cc 33 280 IPR001932 -
Bpe02g00524 293 Gene3D - 26 286 IPR036457 -
Bpe02g00524 293 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Bpe02g00524 293 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
Bpe02g00524 293 SMART PP2C_4 24 278 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00524 Bpe04g00100 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00524 Bpe-Chr2:3410677 Bpe03g00180 Bpe-Chr3:2211240 2.56E-105 dispersed
Bpe04g00842 Bpe-Chr4:5542024 Bpe02g00524 Bpe-Chr2:3410677 5.32E-20 dispersed
Bpe04g01804 Bpe-Chr4:23486980 Bpe02g00524 Bpe-Chr2:3410677 1.90E-52 dispersed
Bpe05g00909 Bpe-Chr5:22108113 Bpe02g00524 Bpe-Chr2:3410677 1.10E-19 dispersed
Bpe06g00598 Bpe-Chr6:16834966 Bpe02g00524 Bpe-Chr2:3410677 3.28E-41 dispersed
Bpe09g00573 Bpe-Chr9:14518416 Bpe02g00524 Bpe-Chr2:3410677 2.78E-25 dispersed
Bpe02g00029 Bpe-Chr2:230685 Bpe02g00524 Bpe-Chr2:3410677 3.48E-53 transposed
Bpe03g00007 Bpe-Chr3:57203 Bpe02g00524 Bpe-Chr2:3410677 1.99E-29 transposed
Bpe06g00452 Bpe-Chr6:15896782 Bpe02g00524 Bpe-Chr2:3410677 6.99E-29 transposed
Bpe14g00296 Bpe-Chr14:2943164 Bpe02g00524 Bpe-Chr2:3410677 1.97E-53 wgd
Bpe02g00524 Bpe-Chr2:3410677 Bpe02g01265 Bpe-Chr2:16086942 7.48E-35 wgd
Bpe02g00524 Bpe-Chr2:3410677 Bpe04g00100 Bpe-Chr4:714252 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00524 K17506 - csv:101216117 533.487