Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g00536 | ATGTCGGACGAGGAGCATCACTTCGAGTCCAAGGCCGACGCAGGTGCCTCCAAAACTTATCCTCAGCAGGCTGGAACAATCCGCAAGAACGGTTACATAGTTATCAAGGGTCGTCCCTGCAAGGTTGTAGAGGTTTCTACTTCCAAGACAGGGAAGCATGGACATGCAAAGTGCCACTTTGTGGCTATTGATATATTTACTTCTAAGAAACTCGAGGATATTGTCCCATCATCCCACAACTGCGATGTTCCACATGTTACTCGTACTGATTATCAGCTGATTGACATATCTGAAGATGGATTTTTGAGTCTTTTGACTGATTCAGGTAGCACAAAGGATGACTTGAGGCTTCCTACTGATGAGAGCCTGCTTAGTCAGGTAAACTACATGAACTCGTATCTATTGCATTTGCGCACATATTGGAAAAGAACAGACAATGATTTTTTCTCATTTGTTTTTCGTGCATTCATTCAGATTAAGGATGGATTTGCTGAGGGAAAGGACCTTGTGCTGACAGTCATGTCATCGATGGGAGAAGAACAAATCTGTGCCCTCAAGGATATTGGCCCCAAAAACTAA | 579 | 43.52 | MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFLSLLTDSGSTKDDLRLPTDESLLSQVNYMNSYLLHLRTYWKRTDNDFFSFVFRAFIQIKDGFAEGKDLVLTVMSSMGEEQICALKDIGPKN | 192 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3464645 | 3466650 | - | Bpe008375.2 | Bpe02g00536 | 98685 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g00536 | 192 | PANTHER | BNAA07G09420D PROTEIN | 1 | 123 | - | - | |
Bpe02g00536 | 192 | SUPERFAMILY | Nucleic acid-binding proteins | 86 | 129 | IPR012340 | - | |
Bpe02g00536 | 192 | Gene3D | - | 157 | 190 | IPR012340 | - | |
Bpe02g00536 | 192 | PANTHER | TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER | 159 | 188 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Bpe02g00536 | 192 | PANTHER | TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER | 1 | 123 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Bpe02g00536 | 192 | SMART | eIF_5a_2 | 85 | 186 | IPR020189 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Bpe02g00536 | 192 | CDD | S1_eIF5A | 86 | 188 | - | - | |
Bpe02g00536 | 192 | PANTHER | BNAA07G09420D PROTEIN | 159 | 188 | - | - | |
Bpe02g00536 | 192 | Pfam | Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold | 158 | 186 | IPR020189 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Bpe02g00536 | 192 | Pfam | Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold | 85 | 128 | IPR020189 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Bpe02g00536 | 192 | TIGRFAM | eIF_5A: translation elongation factor IF5A | 17 | 121 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Bpe02g00536 | 192 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Bpe02g00536 | 192 | PIRSF | Transl_init_eIF5A | 154 | 189 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Bpe02g00536 | 192 | PIRSF | Transl_init_eIF5A | 1 | 146 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Bpe02g00536 | 192 | Gene3D | - | 86 | 130 | IPR012340 | - | |
Bpe02g00536 | 192 | SUPERFAMILY | Translation proteins SH3-like domain | 15 | 93 | IPR008991 | - | |
Bpe02g00536 | 192 | Gene3D | - | 1 | 85 | IPR014722 | - | |
Bpe02g00536 | 192 | ProSitePatterns | Eukaryotic initiation factor 5A hypusine signature. | 50 | 57 | IPR019769 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe02g00536 | Bpe04g00082 | CCT | |
Bpe02g00536 | Bpe14g00600 | CCT | |
Bpe02g01262 | Bpe02g00536 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g00536 | Bpe-Chr2:3464645 | Bpe10g00890 | Bpe-Chr10:14632518 | 6.46E-106 | dispersed | |
Bpe14g00600 | Bpe-Chr14:4994417 | Bpe02g00536 | Bpe-Chr2:3464645 | 2.06E-44 | wgd | |
Bpe02g00536 | Bpe-Chr2:3464645 | Bpe02g01262 | Bpe-Chr2:16078949 | 9.41E-107 | wgd | |
Bpe02g00536 | Bpe-Chr2:3464645 | Bpe04g00082 | Bpe-Chr4:630180 | 5.07E-97 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g00536 | K03263 | K02180 | mnt:21396395 | 297.36 |