Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00568 CTGCAGCCAAAACCTTTGAAGCATTTGGACGGCCAAGTTTGTCAGATATGTGGTGACACTGTCGGACTCACAGCCTCGGGTGATGTATTTGTTGCGTGCAACGAATGTGCTTTCCCTGTTTGTCGGCCTTGTTATGAGTACGAGAGGAAAGATGGGAACCAATCTTGCCCCCAGTGCAAGACTAGATACAAAAGGCACAAAGGAAGTCCACGAGTGGACGGAGACGATGACGAGGATGATGTTGATGATATTGAAAACGAGTTCAATTATACTCAAGGAAAGAGCAATGCAAGACGGAAGTGGCGTGGAGAAGATGCTGATATGTCATCATCGGCTAGGCTCGAGTCCCGTCAACCAGTACCCCTTCTGACAAATGGGCAACCTATCTCTGGTGAAATTCCTGCTACACCAGACAACCAGTCTGTTCGAACAACCTCAGGGCCCTTAGGTCCTTCTGAAAAAAATTCACTCAATTACATTGATCCACGACAGCCAGTTCCTGTGAGAATTGTGGATCCATCTAAAGACTTGAACTCTTATGGTCTTGGAAATGTTGACTGGAAGGAAAGAGTTGAAGGCTGGAAGCTCAAACAAGAGAAAAACCTGATGCAAGTGACAAGTAGATACCCTGAGGGGAAGGGGGATATTGAAGGTACAGGCTCTAATGGGGAAGAACTGCAAATGGCTGATGATGGTAGACAACCTTTGAGTCGCGTGGTTCCCATTTCTTCTTCTCACTTGACCCCTTACCGAGTCGTGATTATACTCCGGCTTATTATTTTGGGATTCTTCTTACAGTACCGAGTATCACACCCTGTGAAGGACGCATATGCATTGTGGCTGACATCAGTTATCTGTGAGATTTGGTTTGCGTTATCATGGCTATTGGATCAGTTTCCTAAGTGGTCTCCCATTAATCGCGAGACCTATCTTGACAGGCTCACATTGAGATATGATCGTGACGGAGAACCATCACAGCTTGCTCCTATAGATGTTTTTGTTAGTACAGTGGATCCTCTTAAAGAGCCTCCACTCATTACAGCAAACACTGTTCTTTCCATACTTGCTGTGGATTACCCTGTTGACAAAGTCTCTTGCTATGTCTCTGATGATGGTTCAGCAATGCTGACCTTCGAGGCGCTCTCTGAAACTGCAGAATTTGCAAGAAAGTGGGTGCCCTTCTGCAAGAAGCATAACATCGAGCCAAGGGCACCTGAATTTTATTTTGCTCAGAAAATAGACTACTTAAAGGATAAGATACAGCCCTCATTTGTGAAAGAGCGCCGAGCCATGAAGAGAGAGTATGAAGAATTCAAGGTTAGGGTAAACGCACTTGTCGCCAAGGCTCAGAAGATGCCCGAAGAAGGCTGGACGATGCAAGATGGTACTCCATGGCCTGGAAATAATCCTAGGGATCATCCAGGAATGATCCAGGTTTTTCTAGGACATAGTGGAGGACTAGACACAGATGGAAATGAGCTTCCTAGACTTGTTTATGTTTCTCGAGAAAAAAGACCAGGCTTCCAACATCATAAGAAAGCTGGAGCAATGAATGCATTGATTCGAGTTTCAGCTGTCCTTACCAATGGAGCATACCTCCTGAATGTTGATTGTGACCACTATTTTAACAACAGCAAAGCTCTCAAGGAAGCTATGTGTTTTATGATGGATCCTGCTTTTGGAAAGAAGACTTGCTACGTACAATTTCCGCAGCGATTTGACGGCATCGATTTGCACGATCGATACGCCAATCGTAATATTGTTTTCTTTGATATCAACTTGAAGGGCCTGGATGGCATTCAGGGTCCTGTTTATGTGGGAACTGGTTGTTGCTTCAATAGGCAAGCTTTATATGGGTATGATCCAGTTTTGACCGAGAAAGATTTGGAACCTAATATTATTGTTAAGAGTTGTTGTGGTCCACGAAAGAAGGGTAAAAGTGGAAATAAGAAGTATATCGACAAAAAGAGGGCGATGAAAAGAACTGAATCTACCATACCAATCTTCAACATGGAAGACATTGAGGACGGTGTCGAAGGTTTGTTCTCTGAAACTGGATATGATGATGAGAGATCACTCCTCATGTCTCAGAAGAGCTTGGAGAAGCGTTTCGGTCAGTCTCCAGTTTTTATTGCAGCAACTTTCATGGAACAGGGAGGAATTCCACCTTCAACGAATCCTGCTACTCTTCTAAAGGAAGCCATCCATGTTATTAGCTGTGGATATGAAGACAAGACAGATTGGGGCAAAGAGATTGGATGGATCTATGGCTCTGTTACGGAAGATATTTTAACTGGATTCAAGATGCATGCCCGTGGCTGGATATCAATCTATTGCATGCCTCCTCGGCCAGCATTCAAGGGGTCTGCTCCCATCAATCTTTCTGATCGGTTGAACCAGGTGCTGCGATGGGCTCTGGGTTCAATTGAGATTTTACTGAGCAGACATTGTCCCATCTGGTATGGTTACAACGGGAGACTAAAGCTTTTGGAGAGAATAGCATACATCAATACTATTGTCTACCCACTTACTTCAATCCCTCTGTTAGCTTATTGTATTCTACCTGCATTCTGTCTTCTTACTGGAAAATTCATCATTCCAGAGATAAGCAACTTTGCTAGCATGTGGTTCATCCTTCTCTTCGTATCCATCTTTGCCACGGGTATCCTTGAACTTAGATGGAGTGGAGTCAGCATTGAAGACTGGTGGAGGAATGAGCAGTTCTGGGTCATTGGGGGTACTTCAGCTCATTTGTTTGCTGTCTTCCAAGGGCTCTTGAAAGTGCTTGCTGGAATTGATACCAACTTCACTGTCACTTCAAAGGCATCTGATGAGGATGGTGAATTCTCCGAACTCTATGAGTTCAAATGGACATCTCTCCTCATCCCTCCCACCACTGTAATTATTGTGAATATGGTAGGCATTGTGGCTGGTGTTTCCTATGCCATTAACAGCGGGTACCAGTCATGGGGTCCTCTCTTTGGCAAGCTCTTCTTCGCATTATGGGTCATTGTCCATTTGTACCCATTCCTCAAAGGTTTGCTGGGTCGGCAAAACCGTACCCCTACGATTGTCATTGTGTGGTCCATTCTCCTTGCTTCAATATTCTCCTTGCTCTGGGTGCGGATAGACCCATTCACATCTGATGCTGCCAAAGCTGCAGCCAGAGGTCAATGCGGTATCAATTGC 3189 44.75 LQPKPLKHLDGQVCQICGDTVGLTASGDVFVACNECAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPRVDGDDDEDDVDDIENEFNYTQGKSNARRKWRGEDADMSSSARLESRQPVPLLTNGQPISGEIPATPDNQSVRTTSGPLGPSEKNSLNYIDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQEKNLMQVTSRYPEGKGDIEGTGSNGEELQMADDGRQPLSRVVPISSSHLTPYRVVIILRLIILGFFLQYRVSHPVKDAYALWLTSVICEIWFALSWLLDQFPKWSPINRETYLDRLTLRYDRDGEPSQLAPIDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRVNALVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPAFGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEKDLEPNIIVKSCCGPRKKGKSGNKKYIDKKRAMKRTESTIPIFNMEDIEDGVEGLFSETGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERIAYINTIVYPLTSIPLLAYCILPAFCLLTGKFIIPEISNFASMWFILLFVSIFATGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGEFSELYEFKWTSLLIPPTTVIIVNMVGIVAGVSYAINSGYQSWGPLFGKLFFALWVIVHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDPFTSDAAKAAARGQCGINC 1063
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3665264 3670744 - Bpe025082 Bpe02g00568 98717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00568 1063 MobiDBLite consensus disorder prediction 97 111 - -
Bpe02g00568 1063 SUPERFAMILY RING/U-box 3 86 - -
Bpe02g00568 1063 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 488 625 IPR029044 -
Bpe02g00568 1063 ProSiteProfiles Zinc finger RING-type profile. 14 60 IPR001841 -
Bpe02g00568 1063 SUPERFAMILY Nucleotide-diphospho-sugar transferases 344 879 IPR029044 -
Bpe02g00568 1063 MobiDBLite consensus disorder prediction 112 159 - -
Bpe02g00568 1063 Pfam Cellulose synthase 330 1053 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bpe02g00568 1063 Coils Coil 428 448 - -
Bpe02g00568 1063 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 87 IPR013083 -
Bpe02g00568 1063 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 4 1063 - -
Bpe02g00568 1063 PANTHER CELLULOSE SYNTHASE 4 1063 - -
Bpe02g00568 1063 MobiDBLite consensus disorder prediction 209 228 - -
Bpe02g00568 1063 CDD mRING-HC-C4C4_CesA_plant 12 62 - -
Bpe02g00568 1063 MobiDBLite consensus disorder prediction 50 160 - -
Bpe02g00568 1063 Pfam Zinc-binding RING-finger 4 81 IPR027934 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00568 Bpe04g00051 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00568 Bpe-Chr2:3665264 Bpe13g01174 Bpe-Chr13:17147738 0 dispersed
Bpe11g00592 Bpe-Chr11:4498455 Bpe02g00568 Bpe-Chr2:3665264 9.89E-131 dispersed
Bpe04g00544 Bpe-Chr4:3449381 Bpe02g00568 Bpe-Chr2:3665264 0 transposed
Bpe10g00547 Bpe-Chr10:12530451 Bpe02g00568 Bpe-Chr2:3665264 0 transposed
Bpe02g00568 Bpe-Chr2:3665264 Bpe04g00051 Bpe-Chr4:446891 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00568 K10999 - vvi:100254408 2052.33