Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00582 ATGAATAAAGAGAATACTGCTGACAAAGTTAAAGAGTCTATTGTCCGAGTCACACGTGCAAGGACTAAAGCCTTAAGCACCTTAGCAGGGAACGCTCGCTCCTCCAAACGTCATTTGAAGGGTCCAATGAATGTCTCCCGGGGAAAGTTTAAAAGAGCTACACCAGACGAGAGTAAAATTTCTGCGCCTGCCTTCACTGTTATTCAGTGTAAGAGGAGGGCCATCTTGAGGGACGCAACTAACACTTTTTGTGAAAGTTCACATACTACCTGCATCAATACTTCAAAAATAAACATTAACGAGTTGCCTGTTAGAGGTCCTGCAAAATTTCATGCAAAGGTGCCATTGGATGTCTCTATACATGTTCCTAAAGCGCCAGATGATCCAAAGACAAAGTTAGCTGAAGATTTATCCAAAATAAGGATGGCAGAAATGGAAGAAATTCCCTTATTGGCAGGGAATGAAGAAGGAAATATTTTGCAAAATACTTACCCATGCATCAAATGTGGCTTCGGTGATATGGCATTTCCTATATCTGGTGACACTGTCTTGACTAAATTTGCAGAAGAATATTTGCCTTGCAAGAATATGGAATCCTCTAATCATATTTGCATCGTGGACATTGATTCAAGCTCAAAGGATCCCCAAGATTGCAGTACATACGCCTCTGACATATGCAAGATGATACGTGTAACAGAGCTTGACCACAGACCATCAACTAATTATATGGAACAATTGCAACGAGATATCACTGTGAACATGAGAGGAGTTTTAATCGATTGGCTTGTTGAGGTATCTGAAGAGTATAAGTTGGTTATTGATACACTATATCTCACTACAAATATCATCGATCGATTTCTCTCTAAAAGTTATATTGAAAAACAAAAATTGCAGCTCCTTGGAGTTACTTGCTTGCTAATTGCCTCAAAATATGAAGAGATCTGTTCACCACCTGTGGAAGAATTCTGTTTCATTACTGACAATACTTACACAAAAGGACAGGTTTTAGAGATGGAGAGTGAAGTCTTGAACTTAATCCACTTTCAGCTATCAGTTCCTACTGCAAAAACATTTCTTAGGAGATTTATTCAAGTTGCAGAGACTGGTTCCAAGGTTCCTTGTGTGGAATTAGAGTATTTGGCTGACTATTTAGCGGAGTTGACTCTTGTTGACTATAATTTCTTAAAGTTCCTGCCTTCTTTGATAGCTGCATCTGCGGTATTCCTTGCCAAATGGACACTTAACCAATCAAATCATCCATGGAGTCCAATTCTAGTGCATTATACCACATACAACACTTCAGAGCTGAAAACTACAGTACTCGCCTTGGAAAATTTACAACTCAACACTGATGGTTCCTCCTTAAATGCTATTCGTGAGAAGTACGGACAACAAAAGTTTGCAATACCATCCATCGAGATTGGCCATTTGCAGCCTAGTTCTAAAAACATGGACTTACCTTTATCAGAACTGCATGGATCTTTACTCTATGATCCTTCATTTAGTCAATATTCATTACCATCAAAACCAATGGAAGTGATGGCATCTGTTCCAGGTACTCCTATGTCACAAAGTTTACTAGTATCACATATGCAGATAAGCCAGATTGATTCCAAGCCCACTAATCTAGTGTCACAGAAAATTCAAGGATCCAACTACCAATTTGGAATGGTTAATAACATGATAGGAATGGATGCCTCTAATAAGTTTTCCCTGCCTGCTAAAAGGAAATATCCATTGGAACCTATACGTCATAGTTTTACTTCACTGCAGCCATCATTCCCTAACAAGCGACCTGAACAGTTGGGACATAGACCTTGGTTACAAAATGTCACTGGAATAAATAAAACTGTGTTGGAGATGCAATCTACATTCCCAACATCACACATATCTCCTGGAACAAGTAAGAAAGTGGCAATTGAAGCTCTTTCTGTTAAATCTGGACCTCAACGATCAACTATTAAAACTCAGTCTACAATGGTACTACCAAAGATTCGGACTGAATCATTTGAATTAGTAAGGTCCAAAATGAAGGAATCCTTAGCTGTGGCGCTTGGCTTGGCTTCTCAGCTGGTTGACCGTTCCTTAGAAACTGGCAAAAGTTTTCAAAATGATGGTGAAAGAATTGTGAGTCTGATGGAGGAATGTTCTCAACCTATTGGTCCGGTTTGTACTGCTCCGGATGTTGTTAATAATGTAGCGGAGGTACGAGGGAGAAATTTATCTGTCAAAGAAGATGTTTCTGCTTGTCAAGGCGAAAAAATCTGTGATAAATCATATAATCTTTTTGAAAATTCAGATAAGGGAAATACACACACTTTGATACCTGGTGCACCAGAGTTTCCTCCAATTGATGTTTTACCCAATGCGGATATTCTTTGCAGGGATAACATCGATGTCAAAGATGAACTTCTCCAAGGGAATGGCCTTTCCTGGGTTTTGGATCCTGATGTGCAGGTAGCTGAAAAGGAGCTTCAATCTGATAAAAATAAAAAGCTGAATCAGGAGGTAATGGATGGATATCAAATGGAGAAAAATTTTGAATCCCCTGTATTTCTGGCCTCTAAAATTGAAGCGGAACTGTACAAATTATATGGGGGTGTGAATAAAAAATACAAAGAGAAAGGAAGATCCCTTTTGTTCAATTTAAAAGATCGAAATAACCCTGAACTGAGGGAGAGGGTTATGTCGGGTGAAATTCTTCCAGAAAGATTGTGCTCAATGTCTGCAGAGGAACTTGCTTCTAAGGAGCTTTCCCAGTGGCGAATGGCTAAGGCAGAAGAGCTTGCTCAAATGGTTGTGCTACCCGACTCAGAAGTTGATATTAGGCGTTTGGTGAGAAAGACCCATAAAGGAGAATTTCAAGTTGAAATAGAACATGATAGTTTTACTGAGCTCCCATCTGCTGTAAGTTCATTTGCTCAGAGTCCGTCAAACGACAATAATGCAGAACACTCTTCTTCCACTATTTCAGCCCATGTTGCTGATGAGAAAAAGGACGAAGAAGCCAATGATCATCCATGTACCTTCACAATTCCATCAATTGAGGGTTCTGACTTGCTGCAAGGGCTCATGGTTGATGATACATTGAAGGATGCTGAATCACTTCCTCCAATTGTCTCGTTGGATGAGTTCATGGAGTCCCTCAATGCAGAGCCCCCTTTTGAAAATTTGCCAGAGGATACTGGGAAATTGAAGCCAATATTGAGTGAGCATGACCCCAAGGCTTGTTCGGAGACAAAGGTTTCTGCTCCAATGACAGAAGATTTCACTGAGAATATACCAGAAGAACATAATGAACATAGTGATGATACTGCTTCTGATCTTCAAGCAGAAGTAAGACTTAGTGTTAATCATGCTAGTCCTCACCCCGATGTTGCTGGTTTCAATACCAAAAACAATGATGCCATTCAGAAATCTAGTGAAGGACTGAAAAAGTCGGGAATTTTGTCTATTGATAGCCCATCCAACGCGGACCTTGTGTGGAATGGATCACTTCAACTTAATGTATCTTCTATGACCTCAACTATAGGAATTTTTCTAAGTGGTGAAAAAGTATCAGCAAAAGATTGGCCTCTTGTTCTTGACATCAAGGGTAGAGTCAGACTAGATGCATTCCAGAAGTTTCTCCTGAACCTTCCATTGTCCAGAAGCCGTGCTGTCATGGTTGTTCATTTTGATTTGAATGAAGGGTGTCCAGAAAATGAGCGATCTAGTCTTCGTGAGGTTGCCGATTCCTACGTTTTGGACGAGCGAGTAGGTTTTGCTGAACCTGTTTCAGGGGTGGAATTATATTTGTGCCCACTCCACAAAAAAATGCTTGAAATGATAAGCAAGATCATGTCGAAGGAACATGCTGTCGCTCTTAATGCTATTGATAATGGCTTAATTGGTGTTGTTGTATGGAGAAAAAAAGTAAATTCAACTTCTACAATTTCCCCCAACTCGAACTCATTCCACAAACACGGTAGCAGAAAACATTTTTCATCCCGTAGACAGCACAATACGAACCTAGTTGCCAATAATATAGCACCCCAACAGCCCCACTTACAGGGCTTGTCATTGACCAGTTCTAAATCCTTAGACGAAATGGATGATGATGTCCCTCCCGGATTTGGTCCCGAGGATAACCGAGATGAAGATGACCTTCCTGAATTTAATTTCTCTGCTCCAAACTCTATTCAGGGCCCTGTGAAGTCTCGTCTTCTCCCCCATTCTCAACAAACTCCCCATACGATGGAGGAAATGAGAAAGCTTGTATACAAGTATGGACAGACAAATGGCAACATGGAAAACAACAGAAAGGAGGAAGAAGACGACATACCGGAGTGGAATCCGGGCCAGAGCCCTACTGAGAGGAGGTTACCATCGCCATACTTGCAAGTTCCCATGAACGTGTTGGCCCCGTCTCACCAGGATCCATGGCACATCCCAGCTAGAAGAGGCTTATAA 4452 40.75 MNKENTADKVKESIVRVTRARTKALSTLAGNARSSKRHLKGPMNVSRGKFKRATPDESKISAPAFTVIQCKRRAILRDATNTFCESSHTTCINTSKININELPVRGPAKFHAKVPLDVSIHVPKAPDDPKTKLAEDLSKIRMAEMEEIPLLAGNEEGNILQNTYPCIKCGFGDMAFPISGDTVLTKFAEEYLPCKNMESSNHICIVDIDSSSKDPQDCSTYASDICKMIRVTELDHRPSTNYMEQLQRDITVNMRGVLIDWLVEVSEEYKLVIDTLYLTTNIIDRFLSKSYIEKQKLQLLGVTCLLIASKYEEICSPPVEEFCFITDNTYTKGQVLEMESEVLNLIHFQLSVPTAKTFLRRFIQVAETGSKVPCVELEYLADYLAELTLVDYNFLKFLPSLIAASAVFLAKWTLNQSNHPWSPILVHYTTYNTSELKTTVLALENLQLNTDGSSLNAIREKYGQQKFAIPSIEIGHLQPSSKNMDLPLSELHGSLLYDPSFSQYSLPSKPMEVMASVPGTPMSQSLLVSHMQISQIDSKPTNLVSQKIQGSNYQFGMVNNMIGMDASNKFSLPAKRKYPLEPIRHSFTSLQPSFPNKRPEQLGHRPWLQNVTGINKTVLEMQSTFPTSHISPGTSKKVAIEALSVKSGPQRSTIKTQSTMVLPKIRTESFELVRSKMKESLAVALGLASQLVDRSLETGKSFQNDGERIVSLMEECSQPIGPVCTAPDVVNNVAEVRGRNLSVKEDVSACQGEKICDKSYNLFENSDKGNTHTLIPGAPEFPPIDVLPNADILCRDNIDVKDELLQGNGLSWVLDPDVQVAEKELQSDKNKKLNQEVMDGYQMEKNFESPVFLASKIEAELYKLYGGVNKKYKEKGRSLLFNLKDRNNPELRERVMSGEILPERLCSMSAEELASKELSQWRMAKAEELAQMVVLPDSEVDIRRLVRKTHKGEFQVEIEHDSFTELPSAVSSFAQSPSNDNNAEHSSSTISAHVADEKKDEEANDHPCTFTIPSIEGSDLLQGLMVDDTLKDAESLPPIVSLDEFMESLNAEPPFENLPEDTGKLKPILSEHDPKACSETKVSAPMTEDFTENIPEEHNEHSDDTASDLQAEVRLSVNHASPHPDVAGFNTKNNDAIQKSSEGLKKSGILSIDSPSNADLVWNGSLQLNVSSMTSTIGIFLSGEKVSAKDWPLVLDIKGRVRLDAFQKFLLNLPLSRSRAVMVVHFDLNEGCPENERSSLREVADSYVLDERVGFAEPVSGVELYLCPLHKKMLEMISKIMSKEHAVALNAIDNGLIGVVVWRKKVNSTSTISPNSNSFHKHGSRKHFSSRRQHNTNLVANNIAPQQPHLQGLSLTSSKSLDEMDDDVPPGFGPEDNRDEDDLPEFNFSAPNSIQGPVKSRLLPHSQQTPHTMEEMRKLVYKYGQTNGNMENNRKEEEDDIPEWNPGQSPTERRLPSPYLQVPMNVLAPSHQDPWHIPARRGL 1483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3771515 3787626 + Bpe008424.1 Bpe02g00582 98731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00582 1483 Gene3D - 238 351 - -
Bpe02g00582 1483 PANTHER TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN 529 1468 - -
Bpe02g00582 1483 MobiDBLite consensus disorder prediction 1426 1456 - -
Bpe02g00582 1483 SUPERFAMILY Cyclin-like 352 468 IPR036915 -
Bpe02g00582 1483 SUPERFAMILY Elongation factor TFIIS domain 2 845 917 IPR036575 GO:0006351
Bpe02g00582 1483 SMART Cyclin_C_2 353 472 IPR004367 -
Bpe02g00582 1483 Pfam Cyclin, N-terminal domain 224 350 IPR006671 -
Bpe02g00582 1483 ProSiteProfiles TFIIS central domain profile. 826 941 IPR003618 GO:0006351
Bpe02g00582 1483 MobiDBLite consensus disorder prediction 1311 1331 - -
Bpe02g00582 1483 Pfam Cyclin, C-terminal domain 353 468 IPR004367 -
Bpe02g00582 1483 SMART cyclin_7 357 445 IPR013763 -
Bpe02g00582 1483 SMART cyclin_7 260 344 IPR013763 -
Bpe02g00582 1483 CDD CYCLIN 254 343 IPR013763 -
Bpe02g00582 1483 Pfam Transcription factor S-II (TFIIS), central domain 826 929 IPR003618 GO:0006351
Bpe02g00582 1483 Pfam SPOC domain 1155 1302 IPR012921 -
Bpe02g00582 1483 Gene3D - 819 916 IPR036575 GO:0006351
Bpe02g00582 1483 CDD CYCLIN 351 443 IPR013763 -
Bpe02g00582 1483 MobiDBLite consensus disorder prediction 32 55 - -
Bpe02g00582 1483 MobiDBLite consensus disorder prediction 1360 1377 - -
Bpe02g00582 1483 Gene3D - 224 468 - -
Bpe02g00582 1483 MobiDBLite consensus disorder prediction 991 1006 - -
Bpe02g00582 1483 MobiDBLite consensus disorder prediction 1360 1386 - -
Bpe02g00582 1483 PANTHER SPOC DOMAIN / TRANSCRIPTION ELONGATION FACTOR S-II PROTEIN 529 1468 - -
Bpe02g00582 1483 SMART mid_6 824 924 IPR003618 GO:0006351
Bpe02g00582 1483 SUPERFAMILY Cyclin-like 213 350 IPR036915 -
Bpe02g00582 1483 MobiDBLite consensus disorder prediction 970 990 - -
Bpe02g00582 1483 MobiDBLite consensus disorder prediction 970 1014 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00582 Bpe04g00043 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00582 Bpe-Chr2:3771515 Bpe06g00715 Bpe-Chr6:17641425 8.30E-111 dispersed
Bpe15g01216 Bpe-Chr15:20797982 Bpe02g00582 Bpe-Chr2:3771515 3.43E-11 dispersed
Bpe03g00036 Bpe-Chr3:612680 Bpe02g00582 Bpe-Chr2:3771515 6.72E-17 transposed
Bpe14g00564 Bpe-Chr14:4807397 Bpe02g00582 Bpe-Chr2:3771515 0 wgd
Bpe02g00582 Bpe-Chr2:3771515 Bpe04g00043 Bpe-Chr4:416855 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00582 - - mcha:111007900 758.444